G163333


Basic Information

Item Value
gene id G163333
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4218122 ~ 4218500 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221340
TGCGGCCCGATGGCGTGGCTCTGGCAGTAGCTCTCCAGGTAGCGCTGGACCTCGTGGTGGGGCAGGAAGCTGTTCAGACTCGAGTCAAACGGGAAGTCAGGGAACATCATCACCTCCTTGGGCAGGTTGGTCCTGATAGGAGGAAATACAGGACCAGTTATCTCCTATTGGCTGGTTAACAGGACCAGTCATCTCCTATTGGCTGGTTAACAGGACCAGTCATCTCCTACTGGCTGGTTAACAGGACCAGTCATCTCCTATTGGCTGGTTAACAGGACCAATCATCTCCTACTGGCTGGTTAACAGGACCAGCCATC
>TU221341
TGCGGCCCGATGGCGTGGCTCTGGCAGTAGCTCTCCAGGTAGCGCTGGACCTCGTGGTGGGGCAGGAAGCTGTTCAGACTCGAGTCAAACGGGAAGTCAGGGAACATCATCACCTCCTTGGGCAGGTTGGTCCTGATAGGAGGAAATACAGGACCAGTTATCTCCTATTGGCTGGTTAACAGGACCAGTCATCTCCTATTGGCTGGTTAACAGGACCAGTCATCTCCTACTGGCTGGTTAACAGGACCAGTCATCTCCTATTGGCTGGTTAACAGGACCAGTCATCTCCTATTGGCTGGTTAACAGGACCAATCATCTCCTACTGGCTGGTTAACAGGACCAGCCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221340 False 317 lncRNA 0.54 2 4218122 4218500
TU221341 True 348 lncRNA 0.53 2 4218122 4218500

Neighbor

gene id symbol gene type direction distance location
LOC120544557 LOC104931097,LOC103374139,LOC102075861 coding downstream 10129 4198358 ~ 4207993 (-)
LOC120543691 NA coding downstream 81088 4127789 ~ 4137034 (-)
LOC120543692 NA coding downstream 93309 4112869 ~ 4124813 (-)
LOC120543678 NA coding downstream 332249 3868758 ~ 3885873 (-)
LOC120543683 NA coding downstream 350888 3861769 ~ 3867234 (-)
LOC120544550 LOC101067509,LOC102791768 coding upstream 30626 4249126 ~ 4260159 (-)
rbmx2 rbmx2,LOC106567889,LOC102785849 coding upstream 86426 4304926 ~ 4309915 (-)
LOC120544562 LOC103395674,LOC101068541,LOC105888650,LOC101167724 coding upstream 247344 4465844 ~ 4466381 (-)
LOC120544559 NA coding upstream 249700 4468200 ~ 4468934 (-)
LOC120544570 LOC104935308,LOC104932967 coding upstream 254757 4473257 ~ 4474025 (-)
G163332 NA non-coding downstream 5091 4208478 ~ 4213031 (-)
G163312 NA non-coding downstream 16405 4165496 ~ 4201717 (-)
G163297 NA non-coding downstream 16522 4145799 ~ 4201600 (-)
G163299 NA non-coding downstream 32282 4184891 ~ 4185840 (-)
G163321 NA non-coding downstream 46833 4170582 ~ 4171289 (-)
G163330 NA non-coding upstream 362 4218862 ~ 4274367 (-)
G163326 NA non-coding upstream 15368 4233868 ~ 4235519 (-)
G163342 NA non-coding upstream 20228 4238728 ~ 4325920 (-)
LOC120544582 NA non-coding upstream 48881 4267381 ~ 4272158 (-)
LOC120544588 NA non-coding upstream 66976 4285476 ~ 4285761 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other downstream 60498 4147863 ~ 4157624 (-)
G163259 NA other downstream 344007 3870325 ~ 3874115 (-)
LOC120544249 alg8 other downstream 984840 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 1019874 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 1122648 3037923 ~ 3095474 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 63273 4281773 ~ 4821872 (-)
G163334 NA other upstream 84066 4302566 ~ 4304048 (-)
G163315 NA other upstream 116343 4334843 ~ 4820499 (-)
taf9 NA other upstream 223489 4441989 ~ 4443562 (-)
LOC120544568 LOC104932967,LOC104935308 other upstream 272505 4491005 ~ 4493351 (-)

Expression


Co-expression Network