G163334


Basic Information

Item Value
gene id G163334
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4302566 ~ 4304048 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221342
CCAAAGACACGGAGGACATGGATGACATCACCAGGCAGCTCAGGGAGGAAGGCTGCGCCCCCAAAGCTGAgcagtcctcctcctcttcctcagagGAAGAGGACCAGTACAGCATCCCCGTCAAGAAGCCCAAGAAAGaaaagaaagaaaagaagaagaagaagaaagacaagaaggagaagaagaagaaggccgagaaggagaaagaaaagaccAGCCGGGCGCCGcactcctcttcttcctcttcctctcctcctcctcctcctcttcctccctctcttcttcctccggCCGCCGTCAGAGtcaaagaggagaaggaggacgCAGCGTACGACAAGTACAACCAGAGGACACCGCTGGGAGGGGGGCAGAacgga

Function

GO:

id name namespace
GO:0006376 mRNA splice site selection biological_process
GO:0000245 spliceosomal complex assembly biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221342 True 377 TUCP 0.56 2 4302566 4304048

Neighbor

gene id symbol gene type direction distance location
LOC120544550 LOC101067509,LOC102791768 coding downstream 42407 4249126 ~ 4260159 (-)
LOC120544557 LOC104931097,LOC103374139,LOC102075861 coding downstream 94573 4198358 ~ 4207993 (-)
LOC120543691 NA coding downstream 165532 4127789 ~ 4137034 (-)
LOC120543692 NA coding downstream 177753 4112869 ~ 4124813 (-)
LOC120543678 NA coding downstream 416693 3868758 ~ 3885873 (-)
rbmx2 rbmx2,LOC106567889,LOC102785849 coding upstream 878 4304926 ~ 4309915 (-)
LOC120544562 LOC103395674,LOC101068541,LOC105888650,LOC101167724 coding upstream 161796 4465844 ~ 4466381 (-)
LOC120544559 NA coding upstream 164152 4468200 ~ 4468934 (-)
LOC120544570 LOC104935308,LOC104932967 coding upstream 169209 4473257 ~ 4474025 (-)
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding upstream 190471 4494519 ~ 4494887 (-)
LOC120544588 NA non-coding downstream 16805 4285476 ~ 4285761 (-)
G163300 NA non-coding downstream 23254 4183991 ~ 4279312 (-)
G163330 NA non-coding downstream 28199 4218862 ~ 4274367 (-)
LOC120544582 NA non-coding downstream 30408 4267381 ~ 4272158 (-)
G163326 NA non-coding downstream 67047 4233868 ~ 4235519 (-)
G163317 NA non-coding upstream 37512 4341560 ~ 4420569 (-)
G163328 NA non-coding upstream 41525 4345573 ~ 4411771 (-)
G163377 NA non-coding upstream 255456 4559504 ~ 4580903 (-)
G163390 LOC104935308,LOC104932967 non-coding upstream 259981 4564029 ~ 4583587 (-)
G163391 NA non-coding upstream 263524 4567572 ~ 4721994 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other downstream 144942 4147863 ~ 4157624 (-)
G163259 NA other downstream 428451 3870325 ~ 3874115 (-)
LOC120544249 alg8 other downstream 1069284 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 1104318 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 1207092 3037923 ~ 3095474 (-)
G163315 NA other upstream 30795 4334843 ~ 4820499 (-)
taf9 NA other upstream 137941 4441989 ~ 4443562 (-)
LOC120544568 LOC104932967,LOC104935308 other upstream 186957 4491005 ~ 4493351 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other upstream 302688 4606736 ~ 4694616 (-)
LOC120544563 NA other upstream 431166 4735214 ~ 4750430 (-)

Expression


Co-expression Network