G163377


Basic Information

Item Value
gene id G163377
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4559504 ~ 4580903 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221417
TCATTATTTAACAttccatatttatttaatatattttgttaaCATGAAGCCGAATTTGGCCAACAGCTGATGAGGTCACACCTTCTGATATTTAAATTGCCACACTGTTTTCTAGCTTTTTTGGATCCATGTATGTGTATGGGACCTCCAGCCTCTCGTTTCTGGCTTTGATGTCCGCACTTAACACTTCAAGCTCTCCGTGAAAAGCCTTGATCAGCTTGCAGGGAATCTTCTCACTGAAATGGTCCTCTGGGCACTTACGAAGTCAGACGACTGCTTGCTGAGTAGCCACATGGAGGCCATTCCCTGAGCTGTTGTGTTGACGCTAGGGAACGTTTCCAGCATCGTGGCCTCGCCAGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGAGTGTTGGGCATCCAGCCACCATAGTCATACTGCAATGAATTAATGGACAGATTACTGCTTAATACTCTTTGAAGTCACGCCATATCAGTCAGGTTCACCACTTGATGGTCCACACtgattcatggtccccagaggatagatcctaatgactttggtgatcccctgaccttTTACTCag
>TU221418
CTTTCAAGCAACTTGTAGATCACATTTGACAAACTTATCCTAAAAATATACTTAACAAGTTACACTCCCAGAGCCCATTATTTAacattgcatttttatttaacatttcttTTAACATGAAGCTGAATTTGGCCAACAGCTGAGGAGGTCACACCTGATATTTAAATGGCCACGCTGTTTTCTAGCTTTTTTGGATCCATGTATGTGTATGGGACCTCCAGCCTCTTGTTTCTGGCTTTGATGTCCGCACTCAACACTTCAAGCTCTCCTTGAAAAGCCTTGATCAGCTTGCAGGGAATCTTCTCACTGAAATGGTCCGGAAGTCAGACGACTGCTTGCTGAGTAGCCACATGGAGGCCATTCCCTGAGCTGTTGTGTTGACGCTAGGGAACGTTTCCAGCATCGTGGCCTCGCCAGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGAGTGTTGGGCATCCAGCCACCATAGTCATACTGCAATGAATTAATGGACAGATTACTGCTTAATACTCTTTGAAGTCACGCCATATCAGTCAGGTTCACCACTTGATGGTCCACACtgattcatggtccccagaggatagatcctaatgactttggtgatcccctgaccttTTACTCag
>TU221419
CTTTCAAGCAACTTGTAGATCACATTTGACAAACTTATCCTAAAAATATACTTAACAAGTTACACTCCCAGAGCCCATTATTTAacattgcatttttatttaacatttcttTTAACATGAAGCTGAATTTGGCCAACAGCTGAGGAGGTCACACCTGATATTTAAATGGCCACGCTGTTTTCTAGCTTTTTTtgttaaCATGAAGCCGAATTTGGCCAACAGCTGATGAGGTCACACCTTCTGATATTTAAATTGCCACACTGTTTTCTAGCTTTTTTGGATCCATGTATGTGTATGGGACCTCCAGCCTCTCGTTTCTGGCTTTGATGTCCGCACTTAACACTTCAAGCTCTCCGTGAAAAGCCTTGATCAGCTTGCAGGGAATCTTCTCACTGAAATGGTCCTCTGGGTATTGGCCAAGAGGGAC
>TU221420
TACGAAGTCAGACGACTGACTGCTGAGTAGCCACACGGTGGCCATTCCCTGAACTGTTGTGTTGACGCTAGGGAATGTCTGCAGCATCGTGGCCTTGCTTGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGAGTGTTGGGCATCCAGCATCGTGGCCTCGCCAGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGAGTGTTGGGCATCCAGCCACCATAGTCATACTGCAATGAATTAATGGACAGATTACTGCTTAATACTCTTTGAAGTCACGCCATATCAGTCAGGTTCACCACTTGATGGTCCACACtgattcatggtccccagaggatagatcctaatgactttggtgatcccctgaccttTTACTCag
>TU221423
TACGAAGTCAGACGACTGACTGCTGAGTAGCCACACGGTGGCCATTCCCTGAACTGTTGTGTTGACGCTAGGGAATGTCTGCAGCATCGTGGCCTTGCTTGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGACGAAGTCAGACGACTGCTTGCTGAGTAGCCACATGGAGGCCATTCCCTGAGCTGTTGTGTTGACGCTAGGGAACGTTTCCAGCATCGTGGCCTCGCCAGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGAGTGTTGGGCATCCAGCCACCATAGTCATACTGCAATGAATTAATGGACAGATTACTGCTTAATACTCTTTGAAGTCACGCCATATCAGTCAGGTTCACCACTTGATGGTCCACACtgattcatggtccccagaggatagatcctaatgactttggtgatcccctgaccttTTACTCag

Function

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU221417 False 581 lncRNA 0.45 2 4559504 4560299
TU221418 True 639 lncRNA 0.45 2 4559504 4580903
TU221419 False 427 lncRNA 0.41 2 4560029 4580903
TU221420 False 399 lncRNA 0.50 2 4559504 4580360
TU221423 False 466 lncRNA 0.51 2 4559504 4580360

Neighbor

gene id symbol gene type direction distance location
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding downstream 64617 4494519 ~ 4494887 (-)
LOC120544570 LOC104935308,LOC104932967 coding downstream 85479 4473257 ~ 4474025 (-)
LOC120544559 NA coding downstream 90570 4468200 ~ 4468934 (-)
LOC120544562 LOC103395674,LOC101068541,LOC105888650,LOC101167724 coding downstream 93123 4465844 ~ 4466381 (-)
rbmx2 rbmx2,LOC106567889,LOC102785849 coding downstream 249589 4304926 ~ 4309915 (-)
LOC120544567 si:ch1073-153i20.5,si:ch73-368j24.13,LOC103462478,LOC107386469,LOC102204254,LOC103381127 coding upstream 20792 4601695 ~ 4602995 (-)
LOC120544576 LOC107723971,LOC107375340,LOC107690788,LOC107579420 coding upstream 23152 4604055 ~ 4604643 (-)
LOC120544566 si:ch1073-153i20.5,LOC103462478,LOC102204254,LOC107386469,LOC101485372,LOC103381127,LOC103379246 coding upstream 46251 4627154 ~ 4628382 (-)
LOC120544564 NA coding upstream 136117 4717020 ~ 4750395 (-)
LOC120544239 LOC104943257 coding upstream 399516 4980419 ~ 4981366 (-)
G163317 NA non-coding downstream 138935 4341560 ~ 4420569 (-)
G163328 NA non-coding downstream 147733 4345573 ~ 4411771 (-)
G163316 NA non-coding downstream 183583 4166383 ~ 4375921 (-)
G163342 NA non-coding downstream 233584 4238728 ~ 4325920 (-)
G163301 NA non-coding downstream 244886 4168202 ~ 4314618 (-)
G163404 NA non-coding upstream 48754 4629657 ~ 4648343 (-)
G163403 NA non-coding upstream 61633 4642536 ~ 4643420 (-)
G163414 NA non-coding upstream 78657 4659560 ~ 4659843 (-)
G163415 NA non-coding upstream 111859 4692762 ~ 4704786 (-)
trnad-guc_9 NA non-coding upstream 175758 4756661 ~ 4756732 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 66153 4491005 ~ 4493351 (-)
taf9 NA other downstream 115942 4441989 ~ 4443562 (-)
G163334 NA other downstream 255456 4302566 ~ 4304048 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other downstream 401880 4147863 ~ 4157624 (-)
G163259 NA other downstream 685389 3870325 ~ 3874115 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other upstream 25833 4606736 ~ 4694616 (-)
LOC120544563 NA other upstream 154311 4735214 ~ 4750430 (-)
G163767 NA other upstream 2676235 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2750011 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 3280550 7861453 ~ 7887088 (-)

Expression


Co-expression Network