G163561


Basic Information

Item Value
gene id G163561
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 5434433 ~ 5437813 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221696
ctctctgtctgtctgtctgtctgtctgtctgtctgtctgtctctctctctctctctctctctctctctgtctctctctctctctctctctctctctctctctctgtctgtctctctctctctctccctctgtctgtctgtctgtctgtctgtctgtctctctctctctctgtctgtctgtctgtctgtctgtctgtctctctctctctctctctctctctctgtctctctctgtctctctctctgtctctctctctctctctctgtct
>TU221697
gtctgtctgtctctctgtctgtctgtctgtctgtctgtctgtctctctctctctctctctctctctctctctctgtctgtctctctctctgtctgtctctctctctctctctctctctctctctctctctgtctgtctctctctctctctccctctgtctgtctgtctgtctgtctgtctgtctctctctctctctgtctgtctgtctgtctgtctgtctgtctctctctctctctctctctctctctgtctctctctctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221696 True 268 lncRNA 0.50 2 5434433 5437089
TU221697 False 261 lncRNA 0.51 2 5436855 5437813

Neighbor

gene id symbol gene type direction distance location
serpinf1 serpinf1 coding downstream 118875 5295961 ~ 5315558 (-)
LOC120544303 NA coding downstream 245406 5186003 ~ 5189027 (-)
LOC120544302 LOC104931089,LOC104947899 coding downstream 260166 5173314 ~ 5174267 (-)
LOC120544301 LOC104947899,LOC104931089 coding downstream 264409 5169071 ~ 5170024 (-)
LOC120543536 LOC104931089,LOC104947899 coding downstream 270484 5163005 ~ 5163949 (-)
LOC120575590 sap30l,sp30l,LOC105890504 coding upstream 52249 5490062 ~ 5508288 (-)
LOC120575636 LOC100711410,LOC102305690,LOC102207837,LOC103358844,LOC106960860,LOC102785365 coding upstream 220594 5658407 ~ 5814142 (-)
LOC120575637 NA coding upstream 361225 5799038 ~ 5803339 (-)
LOC120575643 LOC103353475 coding upstream 634405 6072218 ~ 6181961 (-)
LOC120544211 NA coding upstream 849093 6286906 ~ 6290324 (-)
G163523 NA non-coding downstream 30381 5343653 ~ 5404052 (-)
G163554 NA non-coding downstream 34409 5399545 ~ 5400024 (-)
G163552 NA non-coding downstream 50822 5348695 ~ 5383611 (-)
G163553 NA non-coding downstream 74811 5355298 ~ 5359622 (-)
G163551 NA non-coding downstream 93551 5340364 ~ 5340882 (-)
G163585 NA non-coding upstream 195538 5633351 ~ 5634063 (-)
G163624 NA non-coding upstream 212886 5650699 ~ 5653658 (-)
G163625 NA non-coding upstream 245340 5683153 ~ 5683413 (-)
G163643 NA non-coding upstream 724771 6162584 ~ 6163275 (-)
G163689 NA non-coding upstream 817571 6255384 ~ 6255652 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 612561 4281773 ~ 4821872 (-)
G163315 NA other downstream 613934 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 684003 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 739817 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 941082 4491005 ~ 4493351 (-)
G163767 NA other upstream 1819325 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 1893101 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 2423640 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 2909015 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 2930682 8368495 ~ 8380575 (-)

Expression


Co-expression Network