G163643


Basic Information

Item Value
gene id G163643
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 6162584 ~ 6163275 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221800
tataataaaaaaataaaatctaaatgtatggcTAGCTGCCACgtggcgagtaaatgtaccaaaatagttctgtttttcagccttcattttggcgaaggtgcggcttctactcctctgcaggtcggagcttcgtgggggcgggccgacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactttccacactccgtgtccgcggacagctgtaggcttgtaccgttaatgttcggtgcattgtcggacacatggagccactttcctgaaaccgcttgcgagactgaagagtccacagcggcgtgtatgtccgagcccgtctccacagtctccacctgcaggttgtcagctgtgtggtttggaatgaaacggagaaaacgggacgccgagtaacacggtggatatcgctcatatactttctttttttgacggcgccttaactgcaaagtgctgcaggaaaccctgctccaactctctcgctctctccgccTGGAGTAGCCTACCGcccacacaaagaccatgcgcctgacaagagggttcactcctcgttacgctaaggaaccgagagtggtcctccagtctctttggtagagagagagagggagaaacgaggaaaataaacaagcatgcaaacggaaattatcgcggccgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221800 True 692 lncRNA 0.52 1 6162584 6163275

Neighbor

gene id symbol gene type direction distance location
LOC120575636 LOC100711410,LOC102305690,LOC102207837,LOC103358844,LOC106960860,LOC102785365 coding downstream 348442 5658407 ~ 5814142 (-)
LOC120575637 NA coding downstream 359245 5799038 ~ 5803339 (-)
LOC120575590 sap30l,sp30l,LOC105890504 coding downstream 654296 5490062 ~ 5508288 (-)
serpinf1 serpinf1 coding downstream 847026 5295961 ~ 5315558 (-)
LOC120544303 NA coding downstream 973557 5186003 ~ 5189027 (-)
LOC120544211 NA coding upstream 123631 6286906 ~ 6290324 (-)
gemin5 LOC102786240 coding upstream 165572 6328847 ~ 6363792 (-)
LOC120575570 ddc,LOC102780833 coding upstream 217784 6381059 ~ 6396327 (-)
rars1 rars coding upstream 1127321 7290596 ~ 7321787 (-)
nop16 NA coding upstream 1295489 7458764 ~ 7471087 (-)
G163625 NA non-coding downstream 479171 5683153 ~ 5683413 (-)
G163624 NA non-coding downstream 508926 5650699 ~ 5653658 (-)
G163585 NA non-coding downstream 528521 5633351 ~ 5634063 (-)
G163561 NA non-coding downstream 724771 5434433 ~ 5437813 (-)
G163554 NA non-coding downstream 762560 5399545 ~ 5400024 (-)
G163689 NA non-coding upstream 92109 6255384 ~ 6255652 (-)
G163688 NA non-coding upstream 120094 6283369 ~ 6290858 (-)
G163694 NA non-coding upstream 138409 6301684 ~ 6301977 (-)
G163707 mrpl22,LOC102778570 non-coding upstream 205889 6369164 ~ 6370226 (-)
G163709 NA non-coding upstream 243837 6407112 ~ 6407385 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 1340712 4281773 ~ 4821872 (-)
G163315 NA other downstream 1342085 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 1412154 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 1467968 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 1669233 4491005 ~ 4493351 (-)
G163767 NA other upstream 1093863 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 1167639 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 1698178 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 2183553 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 2205220 8368495 ~ 8380575 (-)

Expression


Co-expression Network