G163707 (mrpl22,LOC102778570)


Basic Information

Item Value
gene id G163707
gene name mrpl22,LOC102778570
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 6369164 ~ 6370226 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU221883
tatttacaaatgtgaaaacagacccacacagacacacacacagacacacacagacacggtcTACAGGCTGTGGATGATGGTTCGGTTCTTCAGGTTCTGGACGTACTCCTTGGCCTGGTCAAAGCTGGTCTTCTCCTCCGTTTTGGGCGGCGAGCCCTCTACCAGCTTGACAAAGTAGTGACAGTAAACTTTGTCCATGATGCCAAACATCCCGCGGCCGTGGTAACGGATGCGCTTCAGGTACTTCCCTTTGCCGGAGTGGGACTCGGCTGCAGGAAGGGGAGACGGGCGGGGACGGTGTGATGAGATCTACATACAGGTTGGATCTGTACTCGACGTTGTGATTTTTGACCGCCATCTCCTGAGCTTCCTCAAGAACCtgaacaaacagacagacaaacacacagctgtgaCATCCATAAATAACCTTCTCGTGTTCGAAGGTGTGATGGGGGACAA

Function

symbol description
mrpl22 Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosome assembly. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL22 (mitochondrial ribosomal protein L22).

NR:

description
PREDICTED: 39S ribosomal protein L22, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221883 True 459 lncRNA 0.52 2 6369164 6370226

Neighbor

gene id symbol gene type direction distance location
gemin5 LOC102786240 coding downstream 5372 6328847 ~ 6363792 (-)
LOC120544211 NA coding downstream 78840 6286906 ~ 6290324 (-)
LOC120575643 LOC103353475 coding downstream 187203 6072218 ~ 6181961 (-)
LOC120575636 LOC100711410,LOC102305690,LOC102207837,LOC103358844,LOC106960860,LOC102785365 coding downstream 555022 5658407 ~ 5814142 (-)
LOC120575637 NA coding downstream 565825 5799038 ~ 5803339 (-)
LOC120575570 ddc,LOC102780833 coding upstream 10833 6381059 ~ 6396327 (-)
rars1 rars coding upstream 920370 7290596 ~ 7321787 (-)
nop16 NA coding upstream 1088538 7458764 ~ 7471087 (-)
dbn1 dbn1 coding upstream 1256474 7626700 ~ 7782793 (-)
zgc:77151 NA coding upstream 1431991 7802217 ~ 7846803 (-)
G163694 NA non-coding downstream 67187 6301684 ~ 6301977 (-)
G163688 NA non-coding downstream 78306 6283369 ~ 6290858 (-)
G163689 NA non-coding downstream 113512 6255384 ~ 6255652 (-)
G163643 NA non-coding downstream 205889 6162584 ~ 6163275 (-)
G163625 NA non-coding downstream 685751 5683153 ~ 5683413 (-)
G163709 NA non-coding upstream 36886 6407112 ~ 6407385 (-)
G163712 NA non-coding upstream 181011 6551237 ~ 6556460 (-)
G163715 NA non-coding upstream 277010 6647236 ~ 6647570 (-)
G163716 NA non-coding upstream 283159 6653385 ~ 6718138 (-)
G163721 NA non-coding upstream 417292 6787518 ~ 6787846 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 1547292 4281773 ~ 4821872 (-)
G163315 NA other downstream 1548665 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 1618734 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 1674548 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 1875813 4491005 ~ 4493351 (-)
G163767 NA other upstream 886912 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 960688 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 1491227 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 1976602 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 1998269 8368495 ~ 8380575 (-)

Expression


Co-expression Network