wwc1 (wwc1)


Basic Information

Item Value
gene id wwc1
gene name wwc1
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 7330914 ~ 7398125 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU222065
tgtatgtatattgatAGCACAAAACAATATCAAACAATGGTACTAAAGCAAAATAAGCAACTTAAGCTGACGATAAAAGAATCCTAAATATCCAAACTAAAGAGATATTatagatgtttgttttttagagCATTTTGTACGCAGACAAACATGAGCACACCTGGAGCTTGTCTGATGGGTACAGTTTTGACGGCACAGATGGGTGTACGTACATAAGCATCATCAGCACgccttctgtttgtttttttcgctaaactgaaaaagaaatgaGAGGAAAAACTGGAACGCTTTACAAACCCGACTCTCGATTTAGgtcgaaaagtaaaaaaaatctttacgATTGTTTCTCaccagttacacacacacacacacgcacacacactcggCAAAGTGAAACAGCACTAACTCTCACTAACACTCAGGTAGTTGATCGGATAGTCTGCACTTTAAGAAACTTGaggtaaaagtgaaaaaaagaaactatgTTGAGGGTTTTTGGGAGAAATAAATCCATAAACCTTTTGCCTTGAATACGCTGGAATGATTGTTGATTGTTGAAGCACACA
>XM_039777952.1
ATGTGTGGCAGCCTTTCGCCGGTGTGGCGGCCTTCGGCGGAGCAAGTGAAGCGGTGGCCTTCGTCGCGATGTGGCAGCCTTCGCTGGCGGTGCGCAGCGCTTCGCTGGCGTGTGGCAGCCTTCGCTAAGTGGCAGCTCTTCGCGGTTATCTGCAGTGAACTCTGTGTAAGGCTGAGGGTTGCCCCAGAAACCTCCCAGGCGATGCAACGCACCCAGCTGGAGGACCCGCGGGCCCAGTGGCAGCGGGAGCAGGAGTCCATGCTGCGGGACTACCTGGCCGTGGCCAGCGACGCGCTCAGCGCCCAGAAGGAGATCTACCAGgtgaaggagcagcggctccgCCTGGCGCAGCAGGAGTACCGGCAGCTCAACGACACGTGGAGGGACAAGTCAACGTCACAGACCAGCTTGAATTCCAGATCGTCCTCATCCAGCAAGTACGACCCAGACATCCTAAAAGCAGAAATAGCCACAGCCAAAAGTCGGgTGAACAAGCTGAAGCGGGACCTGGCCTGCATGAAGCAGGAGCTGCAGTACAAGGAACAAGGCTACGAGACCCTCAAAGAGATTGACCAGAAGGTGTCCAACAGCCCGTATGGCTACAAGCTGCAGGAGGCGCAGGCTATCCTCAGCGAGGTCCGCTCCATCCGAGACGCCATCAGCTCTGGGGAGAAGGAGAAACAGGAACTCATGCAGAAACTGGCGGTGTTGAAGGACAGTTTCCAGCTGGACTCGGGCTCCCAGCAGGAGCTGTGGGGCAGCAGTCCCTCGCTCGCCAACTCGGAGCTGTCCATCCCTCGCCTCTACTCGGACGCCGGCTCCCAGACCGACATCCCCGCCGAGTTCATGACCAGCACCAACAAACTGGCAGAGAAGGTTCGTCTGAGTCTCAAGTACGAGGAAGCCAAGAGAAGGATCGCCACCATCGAGGTGCAGATCGCCAAACTGGACAGCGAGGCGTGGCCGGGGCTGCTGGACCCGGAGCGGGACCGCCTCATCCTCATCAACGAGAAGGAGGAGCTGCTGAAGGAGCTGCAGTACGTCGGCCCTCGCCAGCGCCTGCAGCCCAACGACGCCGAGAAGCTGGAGTCGGAGAAGAAGCGTCTGGAGCGAGACCTGCAGGCCGCCAGGGACAACCAGAGCAAGGCTCTGACTGAGAGGCTGCGACTTCACTGCAAGAGGAACAAGCTGGTGCGAGAGCTGGAGGAGATGGTTCGACTGGCCACATCACTACACACTCAACTCAAGAGccTGTCGGCCAGCACTCTGTCCTGTTCGTCCGGCAGCAGTCGAGGCTCCCTAACGTCCAGCCGCGGCTCGCTGGCCACCACCTCCAGCCTGggctccacctcctccctcaGCTTCACCGACCTCTACCTGGAGCAGCCCGAGCTGGCCGACCCGGACTTCCAGAACAAGCTGGACAGCCTCCTGGAGGGCGGCCAGGGAGGCTACCGCCCCTCCAGCTCCATCACCACCATACACGAACACGAAGTAGTGACGGCCTCCGGAGGCAGGGACGCCGGGAGGCCCGCGGCGGGCAAAGCGGGCGTGGTCGGGTGCTCCGCCGGAGGAGGCGCGGGGGAGGGCGTCGGCGTCGGAGCCGAGTCGGGGTCCTCCAGGGTTCCGGCGCTCCGGCCGCCAGAAACCCCTCGCTCCATGAGCTCGCTGTCTCCGCGCTCGTCTCTTTCCTCGCTGTCTCCGCCGTGCTCGCCGCTGGTCACAGACTCTAGTTTCCTGTCGGGGGAGACGTTCGCGGGCCAGACGGGCCCCGGCGGGCTGGGCCTGGATCTGGAGCTCCACAGCCGGCTAGCGGAGCTCGAGCTCAGCCTGGACTGTCAGGAGCAGCGGCAGGAGGAGCAGCGGCAGGAGGAACAGCGGAGTCCGGCGGGGCCGGGGGAGAAGCAGAACCACAACACCACGCTGGGCGAGGAGGTCAAAGACTCGGCACCCCAGTTGCGCGGGACGGGGGCGGGGCCAAAGAAGATGGGCGTGACCTCAGCGGTGTCTGACGAGTCGGTGGCTGGCGATAGCGGTGTGTACGAGCCTTCAGAGCGCAGGCCGGGCCTCCCTGCAGACCTCCCGCTCGCCTCCTACGAGGAGCGGTTGGCGCTGGGCTGCTCTCAGGTGCAGCTCGGCTTCCGCTACGAGTCCAGAGACCAACGCTTCACCATCTACGTCATGCAGCTGTCCAACTGCAGCGCCCTCTGTCTGCCGGCTGACCAGAAAATGTATGTGCGTTCGGCGGTGCTGCCCTGTGTGGAAGCCACGCGCTGCCTCTTCCGAACGCGCGGCTCTCTGCCTCAGGACGTCGTGGACGTCAACGAGGTGTTCAGCATGCAGATATCCCACAGCGCATTGCGGCAGAAGACGCTGAGGGTCGACATCTGCAACACCAGCAAGTCGGGCCATGAGAAGTGTCTGgcGGGAGCCCAGATCAGCCTGGCTGATGTCAGCTGTTCGGAGGAGAGATGCACCAAGTGGTACAACCTGCTGAGTCGCGCCTACATGCCCGAGATGAACAACAAGGAGAAGGAGAGCAGAGCAGCCGGCGGCTCCGACAGGaatcatgtttcCGGCGGTGGCGGAGTTGAAGTTTCTGCGAACGACGAGTGGCGTGACGACCCTCTGGACGTGTTCGACGACGACGATGAAGAAGGAAATGGCGAGGAGGGGGTGGGGCCTCTGGAGGAAGAGGACGCGTTTTATCCTGACAGCAGGCAATGGgaagcagaggaggaagaggaggaggaggaagaggaagagaagatgGTGAAACCCCCGACgacgacagcagcagcagcagcagccatcacAGAAAAGGTGAACAAGGAGACGAGCATGGACAACTTGCTGCCGTCCTACCACTGCTCCGTGGTCCGACCCAAGGAGCGCCGCCGGGACGTCCACCAGCAGAACCCCTTCATGAGGGGGAACACCATCATCCGCTCCAAGACCTTCTCCCCGGGACCTCAGAGCCAGTACATCTGCAGGATCAACCGCAGTGACAGCGACAGCTCCACCCTCTCCAAGAAGTCTCCATTTGTAAGGAACGCCTCCGAGAGACGCAGCATGCGCATGAAGAAGCCTCCGGTGCCGGTTAAAGGTCTGGACGGCCTGCTGCGGACGTCCCTGGACCTGGAGATGGACCTGCAGGTGTCTCGGACGCGGCAGTCCCGGCTGGCGCAGGAGCTGCGGGTTCTGCGGGAGCTGAAGACGCAGCTGGAGAACGCCAGGCAGCAGGGCCAGAGAGAGCTGCCGGCCTGGGTCCAAGAAGACGAACGCTTCCGCCTTCTCCTCAAGCAGGCCGAGATACAGACTCGCGAGGAGCAGCTGCAGGAGAAGCGGGTGGAGAAGATGATGAGGGCAGCAGCCAAGGGCGTCCACAAGATCAGGGGCCAGAGCTGCAAAGAGGTCCCCAAGGTCCAGACCTTCAGAGAGAAGATGGCGTTCTTCACACGGGCAAAGAGCAGCATCCCCGACCTGCCGGCTGACGACGTGTAGAGGAGCATTTCAGAAGTATctcttcccccctcctcctcctcctccgagTCTTAACCTGCTGTTCCCATACAAATGAAGCAACCGTTCGGCGGTGTtatgaagaataaaaaaataaaaaagaacactATAATATGTTTTAGTAAATAAAACGCTCAAAACGGTGAAAAAAcccaacacatttttaaagagcTCAGCATTTCTAATGTGGATagtctttgttttttaattagcGATAGCactgatagtttttttttttctccttttcctttttattatactactctctcccctctctcgcTCTTCCACTCTGTTTATCGCGTTGTGTTTCTGTTACTAACCGGCTGTTTATAGGCTTTTTTTaggcgtttaaaaaaaaaaaaatcattccaGCACAAAGTCACACAGCTGCACATGTGCATACACAGACTTTTGTACTAAAATGAAACATttggacaaaaataaaaacatatatatatatatatatatatatatatgtgtgtgtgtgtatgtatatgtgtatatgtatgtatattgatAGCACAAAACAATATCAAACAATGGTACTAAAGCAAAATAAGCAACTTAAGCTGACGATAAAAGAATCCTAAATATCCAAACTAAAGAGATATTatagatgtttgttttttagagCATTTTGTACGCAGACAAACATGAGCACACCTGGAGCTTGTCTGATGGGTACAGTTTTGACGGCACAGATGGGTGTACGTACATAAGCATCATCAGCACgccttctgtttgtttttttcgctaaactgaaaaagaaatgaGAGGAAAAACTGGAACGCTTTACAAACCCGACTCTCGATTTAGgtcgaaaagtaaaaaaaatctttacgATTGTTTCTCaccagttacacacacacacacacgcacacacactcggCAAAGTGAAACAGCACTAACTCTCACTAACACTCAGGTAGTTGATCGGATAGTCTGCACTTTAAGAAACTTGaggtaaaagtgaaaaaaagaaactatgTTGAGGGTTTTTGGGAGAAATAAATCCATAAACCTTTTGCCTTGAATACGCTGGAATGATTGTTGATTGTTGAAGCACACAAAGATtgttgaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccagcaggaAGTAagattaaatgtattttgttgatGACTGATGCGAACTAAAAGGAGTTTTTAACTTCA

Function

symbol description
wwc1 Predicted to enable kinase binding activity and molecular adaptor activity. Acts upstream of or within otic vesicle development and otolith formation. Predicted to be active in cytoplasm. Orthologous to human WWC1 (WW and C2 domain containing 1).

NR:

description
PREDICTED: protein KIBRA

GO: NA

KEGG:

id description
K16685 WWC1; protein KIBRA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222065 False 566 lncRNA 0.37 1 7331076 7331641
XM_039777952.1 True 4753 mRNA 0.56 22 7330914 7398125

Neighbor

gene id symbol gene type direction distance location
rars1 rars coding downstream 9127 7290596 ~ 7321787 (-)
LOC120575570 ddc,LOC102780833 coding downstream 934587 6381059 ~ 6396327 (-)
gemin5 LOC102786240 coding downstream 967122 6328847 ~ 6363792 (-)
LOC120544211 NA coding downstream 1040590 6286906 ~ 6290324 (-)
LOC120575643 LOC103353475 coding downstream 1148953 6072218 ~ 6181961 (-)
nop16 NA coding upstream 60639 7458764 ~ 7471087 (-)
dbn1 dbn1 coding upstream 228575 7626700 ~ 7782793 (-)
zgc:77151 NA coding upstream 404092 7802217 ~ 7846803 (-)
LOC120543650 NA coding upstream 509295 7907420 ~ 7948944 (-)
uimc1 NA coding upstream 555892 7954017 ~ 7980904 (-)
G163860 NA non-coding downstream 3021 7326222 ~ 7327893 (-)
G163742 NA non-coding downstream 239534 7091101 ~ 7091380 (-)
G163734 NA non-coding downstream 257660 7072946 ~ 7073254 (-)
G163729 NA non-coding downstream 273932 7056731 ~ 7056982 (-)
G163727 NA non-coding downstream 286962 7036687 ~ 7043952 (-)
G163865 NA non-coding upstream 19085 7417210 ~ 7418222 (-)
LOC120544008 NA non-coding upstream 43118 7441243 ~ 7451496 (-)
G163894 NA non-coding upstream 397194 7795319 ~ 7796512 (-)
G163896 NA non-coding upstream 401775 7799900 ~ 7802200 (-)
LOC120543653 NA non-coding upstream 584943 7983068 ~ 7984196 (-)
G163767 NA other downstream 44649 7257138 ~ 7286265 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 2509042 4281773 ~ 4821872 (-)
G163315 NA other downstream 2510415 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 2580484 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 2636298 4606736 ~ 4694616 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 463328 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 948703 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 970370 8368495 ~ 8380575 (-)
smg8 smg8,LOC102779993 other upstream 1053452 8451577 ~ 8465799 (-)
trim37 trim37,LOC102780947 other upstream 1114049 8512174 ~ 8543503 (-)

Expression


Co-expression Network