G164022 (kctd7,LOC102776841)


Basic Information

Item Value
gene id G164022
gene name kctd7,LOC102776841
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 8346828 ~ 8352505 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU222295
AAGCATGTAAcagttatttttacttttaccataaataataaaaatgacattCCTTTTTCACAAACTTAACCCAAATAATACCACAGAACTAAAGCTTCCTGGAAGCTAACAGAAACAGATaaataacaatataaaacataacAGTGTAAACAGAGATTAGTAGTGTTGCATCTCTCCTGCATTATCTGTTAAAAgtataaaacaacaaaataagcatGTTATAAATGAACTGATGCCGACGCTGTTGCTTTCTATCGTTGTTTATCTGATACTTTCACTTgaggtaaaaataataataataataataataataataataataataatgaattggTTACAATTACAAAGTGCTCTGACTTCATTATCAAGAACAGAAGAAATAACATTTAACTTTACCTCTCTAGATTGCAGCTTCGGTGAATTTGTCGTAATGTTGTAAAAGGTGGAATGAAAGTTGACATTCAATAAGAATAATTATTAATTCTCTCTGTGACAGTGGCTATAATAAATATTATGCATTTTCTAACTAAGAAACAATGAACAAATGTGTAAACAACTGTACTTCATCTGCAAATTTGCAGCAGTGTGCAACAACTTAACCTACCATCAATCCCGTGCTACTTTAAAAGTAACCAAGTAAAACATgaaaactggagaaaaaaaaatggatacCACACATCCTTAAAAACACGCTCCTCGGGAGGTTGCATAATTAAAATATACTCTGTTTATCCCAAAAGGAACAGGCTCGCCGTTAATCTGCATCCTGAAACAAAACTTAGTCCTAAAAATATACAGATTTGACTTCAGACTTTAGCTACTTACAATATTCAATATTTACTACAAGGTAATTCCTTTGTTCTGGTGAGACGCGCATGAACCCAAATCAATTCAGGTTAGGGCAAAGCCGTGAAAAAGTTAATGCAGTAAatgattacaaaaaataataatacatttaggaCATGGACAGAATTAGCTTTTAAATGAGATATACGGTCATGTCATCCACTTCTGATGCGACTGTCATCTCAGAATTTCTTTTGCACATTTTTGCAGCTTTAATCTTTCGTCAGTGTGTCTCAGGGCTTGATGCATAGACTGTggaagtgaagccaaaacatctggatcacctcctccacctccaccacctCAAATAATTTTTTCCCCAAAGATGTTTCTGTCATTGTAGACAATTCTGATCACGCTGATGTTTGTTAATGTCTTCAATTTTCTGATAAAATTGGTTTTAATTAGTTACTTGATGCTTTAAAAACGGGGTGAAACATCCtgattgacagctgggattGACTGGTGATTGGTCGGGCAggtgtatgggcgggacttTGATATCGTTGCTCCACCACCCGATAATAATACTGTGGCTCCAATattacaagatggcagcgccTGTATCTgcgatattttggcttcacttttgtacagtgggaggaagtggagacatgtcgtccatcttttttttttacagtctatggtgtgtCTACACTGGATGCATTTAGCCACAGAACTCCGAAAAACTCTCTAAAGTCTCTGTAGTTACACATGTAAGttggaaaatagaaaaaaattgatttgacactagagctgggcaatactgagaaaatcaaatatcccgatatttttgaccaaatacctcgacatcgatattgtggcgatattgtagggttgacaattggtgctttcacaaaatatgcacacaatgagatttttgattattaatcatcagttatgttgatataatgactaagtgggtaaaggcaaataatggaacagctagaacagtctggaaagttcagaaaatgacatcacttcactgtaatgcagcctttaaaaccaggaaaagacaacacttatgtcacatcaggatatcacgatatccaaattttaagacgatatctagcctcatatatcgatataatttCGATATACTGCCCAGCCCTATTTGACACCACGGTTTTGGGTCGAGGTTACGCGACTTAAAgcaggaaagaggaaaaagccTCTTCATTTCTCTTACAAATTTGAAGTTGTGTGCACAATGTGAAAACGCACCATTGTTCAATATACACTCAGGAGTTTGGCAGCTAAAGCCACACTTGGTCTGAAATGACCATTAGATAGCTACTGTATAACAGAGATTGTCATTATCGATATTGTTTTGTTATTCATGGCCACAGTGGCTAGTGTTTGGCAAAAATATTGATTCAAAATGAAGCAGATTTGTTCTGTCAGACATGCAACAGGCTGCAAACACCAACGTGTTTCAGTCACGTTATATTTAATCGCCCTAAAAACATAGACTTCAGTTTTCATCAACACAGCGATGAACAGAAGCTCCATAATGGCTGGTCTATCACTCGGTTTTGCACACATAGCCGCAACTTGAGGCATATCATttttgctttgtgtttttttgttaacttGCATGTAACTACAGTGACTGCCCTGGATCTTAACTCCAACAAAACCCGTCTGAAACGCGCCCTAAATATCATAATTTAAGAATAGACCTTTAATTAGTAACTTAAAGGAATAGTCTATCCAGAAGCAATATACGTTGTATATAGAACTCACATCCCTCGGGTCCCTATGGTCCCAAAAAACGTTTTCTATGTAATGGCGTTAAGGAGAGCGGAGCGCccgaaaaagagaaaaaatatcAGTCCAAACAAAAGACACCAAAAAAGGttataaaacatcagaaaacgTTCTGAGAGTTCCTTTGCAGTACTATCCAAAGCATTCCAAGGAGGAGAATCAGAAAATGCTTTGTTTAGCAATAGTGTAGCGGAAATAGTTTTGTTTAGATTTCCAAGAGAGGATAAAAGACACGTGGATAATGCTGCACAGGAATTTAGGAGAAATGTTTTTACACGTTTTATAACCTTGTTTGCCGTCTTTCGTTTGCACTGATACGTTTTCATTTTCGGGCGCTCCGCTCTCCTTAAAGACATCCGATGGAAAACTTTTTGTGGGTCCATAGAGAGTCTAGAGAGGTGAGTGCTATATAtaattcatgttgtttttggGTGAACTATTCCTTCAAGGGTAGACCTTAACTTAACGGCAGACTGAACAGCAGTGTTTTTCCTCTCTGGTTGAAAGTCTTCAGCCTGTTTTACCTCTGTTTCATAACTGTCGGGTGTGGTCACAAGTCAGCTTTGTAACCACACCCGACCGTGATGTCACGAGGTCCTGAAGTACACCTGTGCTTccctagcctggctccgccctcctacgtgatgccgctcaattttcattttccttcagtacgtcGTCTGAGTTTGcggtatagtcttgggttttctccggccaaatctttaccggtccaatcagcgaacagagggagtggctgagaacgatgatgttgaggtcgtgcgctagtttgagttgtagttccgtaatgaaagatgcgagcgaagccattcggtccgttgtggcaacgctgccgaatatccagaagttaaagcccgagcaagaccaatctttgctgagttgtgttggggggggccgtgatgttgtggccctcctccctacgggggttcgggaacagtttgattttccagctcgctccgttagtggggaaggagttagctaaggctaacgctagcgatgctaagccgacgtcacgaccaaacgttagtgattggttctggcagatccagagtggctctgggcagatccaatagttttaaacttcaacagagtacccgccttcaaggaagttaacacttgtcaatggagagaggccagactctctggactaatgaaatggaccagagtctggtaggaccaggctagtgtaccagagtctggtaggaccaggctagtgtaccagagtctggtaggaccaggctaatgtaccagagtctggtaggaccaggctagtataccagagtctggtaggaccaggctgatgtaccagagtctggtaggaccaggctaatgtaccagagtctggtaggaccaggctaatggaccagagtctggtaggaccaggctagtgtaccagagtctggtaggaccaggctagtgcaTCACTGCATCAAGCTGAGAAGTTTAACCACTGGAGGTCAGCAAAAACTGGATTTTTACTCTTTAAAGTAGTAGTAGTGCTTTGGTATTTACACCTATTTACCAGTTTATTAGGCTCACTTAGCTAAAGCTAATGTCACTAACCCAACAGTCCGGGAATAAATCCTCCTTTATGGAGGTTATAATGTTAATTTTTTAGTTAAACTCTTTGGGATTTAAGATTtattgtagggctgcaactaaggaCTATTTTAATAGTcgttttctcgattaatcgattagttggtctttaaaatgtcagaaaatggtgaaaaatgtggatcagtgtttcccaaagcccaagatgacgtcctcaaatgtcttgttttgtccacaactcaaaagatattcagttaagTGTCGTAGAGGAGtgaaaaaacttgaaaatattcacatttaagaagctggttTAAAAAACtcaaatcgattatcaaaatcgTTGCTGATTAAttgaatagttgacaactaatcgattcatatttGCAGCTCTAATTCATTGCAGGACTGTTGTTTTAGACTGCATTCGTTTTAGCtgggtgtacctaataaactggcaactgagtgttATGACTTTGATacgaaagaaaataaaaaaaatattttggggGAAACATAATACTTACATGTTGAATCATGATTTAAAGGTCACATTTTAAGATGTCAGCACAAAATATTGGCGCCTTCAATACAAAAACCAATATCGGCCGAGTCATAGTAAAGATGGAACATCCATCCTTTTTGCTTTTTGGTCCCATCAGCCCCGACTGTCTCCCCCCAGCTTCACCACCATGTGATCTTGAACTCGTAGATGGGCCTCTTGCAGTAGTAGTGGTTGATAAGGTGCTTGTCGCAGACGCCGATGCACTGCTGCTCGGCGGTGATGCCGAGCTCGGCCAGGTCGCTGACGATGCAGTGCAGCAGGTCGTAAACGTCCGCTACGGCCTCCCAGGGTCCGAAAGAAACGTCCACCTCGCAGTGATGCTCGAAGAGCTTGGCCTCGCTGTCCGAGCGCTCAAAACGCAGAGAGTTAAAAAGAGGACGCTCGTACGGCGTGATGGGCATCTCCTCCTTGTAGACGCAGATCTTCAATTTGGCAAAGCGGGCCTTCTTCTGAATCGCCCTCATTTTGGCAATCTCCACAATGCGCTCCA

Function

symbol description
kctd7 Predicted to be involved in membrane hyperpolarization and positive regulation of transporter activity. Predicted to act upstream of or within protein homooligomerization. Predicted to be located in cytosol and membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 3. Orthologous to human KCTD7 (potassium channel tetramerization domain containing 7).

NR:

description
BTB/POZ domain-containing protein KCTD7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222295 True 5243 TUCP 0.41 2 8346828 8352505

Neighbor

gene id symbol gene type direction distance location
si:dkey-183i3.6 NA coding downstream 13758 8315778 ~ 8333070 (-)
trnal-caa_12 NA coding downstream 54310 8292407 ~ 8292518 (-)
rab24 rab24 coding downstream 68739 8259787 ~ 8278089 (-)
fgfr4 fgfr4,LOC103363329 coding downstream 250755 8074947 ~ 8096073 (-)
trnad-guc_16 NA coding downstream 364757 7982000 ~ 7982071 (-)
vps26c dscr3 coding upstream 75911 8428416 ~ 8441204 (-)
kcnj15 kcnj15 coding upstream 92613 8445118 ~ 8449262 (-)
slc37a2 slc37a2 coding upstream 225565 8578070 ~ 8594221 (-)
ccdc15 LOC104960196 coding upstream 242982 8595487 ~ 8603766 (-)
psmg1 psmg1,LOC102782103 coding upstream 252191 8604696 ~ 8614450 (-)
G164021 NA non-coding downstream 3182 8343399 ~ 8343646 (-)
G164017 kctd7,LOC102776841 non-coding downstream 5184 8335596 ~ 8341644 (-)
G164006 pgrmc1 non-coding downstream 59166 8282378 ~ 8287662 (-)
G163958 NA non-coding downstream 193481 8153081 ~ 8153347 (-)
G163956 NA non-coding downstream 281629 8064776 ~ 8065199 (-)
G164027 NA non-coding upstream 13898 8366403 ~ 8368088 (-)
G164032 LOC103371649 non-coding upstream 22717 8375222 ~ 8413669 (-)
G164038 NA non-coding upstream 35857 8388362 ~ 8390745 (-)
G164042 NA non-coding upstream 48474 8400979 ~ 8402344 (-)
G164031 ttc3,LOC103371649 non-coding upstream 58904 8411409 ~ 8412657 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other downstream 459740 7861453 ~ 7887088 (-)
wwc1 wwc1 other downstream 948703 7330914 ~ 7398125 (-)
G163767 NA other downstream 1060563 7257138 ~ 7286265 (-)
LOC120544563 NA other downstream 3596398 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 3652212 4606736 ~ 4694616 (-)
rabgef1 rabgef1,LOC102778478 other upstream 15990 8368495 ~ 8380575 (-)
smg8 smg8,LOC102779993 other upstream 99072 8451577 ~ 8465799 (-)
trim37 trim37,LOC102780947 other upstream 159669 8512174 ~ 8543503 (-)
G164179 NA other upstream 285209 8637714 ~ 8639161 (-)
plekhb1 LOC107387206,LOC100711952 other upstream 1756651 10109156 ~ 10127607 (-)

Expression


Co-expression Network