G164196 (ap2b1,LOC103395083)


Basic Information

Item Value
gene id G164196
gene name ap2b1,LOC103395083
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 8739849 ~ 8746156 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU222528
TGGAACCCCCCTTAACGACCCCCAGGGAACCACTGATCCGAGTAtttacaatattaaaaataaaagagctGTTCGATCATTTAATAGTCAACGTGTCCAAATTGCACCAAATTCAACACTGCACGCACTTGGGTCCCCCAAGCAAAACACCCGCCTCTACCATCATAGCGGTAGGATATGAACACACAGTGATGCATcatgtttttgacattttaatgacATAAGATGTGGTACTGTGACAATAACAAATCATTTACAACAGGGCTACAGTAATGATGCTAGGAATAAGATAGCTCTCACCATACTTTCTGTATTGCTGGCAAAAGTTGTGGATATACCTCTATGTGTGGGAGTGCTGGAGACAACGccgctcaaaaaaaaaaaaatgaaacatgaGATCTACAACAGAGACATGAAGTTGGGAGAATCATTTTTAAATGGAGCAAAGCCAcagcctaaatgaaaaaaaaaggataaaatggACAGTGGGTTCATGCAGGcacataaatgtatttttacattACCATGTAGGAAAATAGTGTCACCAACACAACTGTTACGCTGAAAGGGCCTTTTCTGTTGAATAGATAGAAGTAAGGCTTCATTTCCTTTTCAGGGTAATaccaaaacattttaatttattagcTACATAAACTACACCATCACTGGACTACACTTTACTCGCCCAACTCTGGGCCTTAGGGCGTATGCACCCTATGATCTATAGCACACACAAAGCCAACATTAGGAGATTATATTGACACTAGGGTGTTAAAACACAAGCTTGGCATTTAATTTGCGTGACTGCTTGGTCCTGTGTGATTGGTCCACCTGACTTGCCACAGGTTTAGACTGGCTTGACAACAATGGCATGAAAATTACAGAAACAACACTGGTATGAAAAGAAAAGGCGACACCATTTAAAGCACATTACAGAATGGAAGCTACAGCCACAATAAAGCCGGTTAAAAAAGGAAACAGCAGAGGTAGATGCACAATAAATAGGAATGACAATATAGGTGCGTAAAGCCATGTGAAACGATGTGGTTGCAGTAAACGGGGCTATtacaaaaagaaatacatgtgAAATGAACTAGCAAATGTTCTTAAAACAGAGTGGCACTGCTGTGTGAGCACGTAATCAGTGGCTGCTGTGGTTTGTGTAGTGGTTCCAAACTCATAAGTGAACACTTTTCAAATTTGAAAACAATGGCAACCTTGCAATTTAAACAGGAATTAAAGAAATGTACTGTGCGTTACTTGCAGTCAGAAGCGTCTTGACCGTCTGTTTTACTGACATTCTGTGTTCCTCCACTTAAACAAGCCTGCAGAAACCTCACCACACtggatgcattttttttttattgttgttctaACATGACTTTATAATCACGTAAATATTTGCTCTTTTATGCCAAAACCGTTCCATTGAAGCTTCTTCGCATGGCATTTCACAATTGATTGCTTTTTGCATTTAGAATGCTCTTGTGCATCCTAGTCACCTGTTTTTAcgatttgttttaaaatttgagcattaaaaacattgaaaagaaaaaaagctaaatattCCTAAGACATTCACGTCaactgaggtaaaaaaaaaggtggagtGTTAAAGACAGCGTGTGCTGAAAGCGGATTAAGACCTTTGCGCGACCTGCTTCTGTGTTTTACCACCTGTGACGTAGCTGTCTCCAGATGGACCACAAAAGGCAAGAGACAGGCAGGAAAGTGTGAGTAACATAATTCACAGGAGGGAAGCAGCAATAAAATGCCAGGATTTAGTAGTTACATTAGAGTTCCTGgtgctcttttctttttccaacgttttggaATGTCATTtgaagttagttttttttccaattacTGCACAGTTTCATACTTAGGGAGGAAAAAGTATTTTCTAtctacacactgcacacattttAAGTAATGCCATTAAATACAAGACGCTGTGTTAAAGTCATGACAGGAAAAACAGGAGTACATATGCTGCTCAATGTGATTTATAATGTTGGTTAATTTAGCATGTCGCTAGAAATAAGCTATAACCTGCTGCAGGACAGACGTAAGTAGCTTCTGACGATCACATTGTTGGTTTCGACTCTTCACAAACATTAAAAGGCAAAAAGGAACAAATCAACCCTGGTATTATTCTGTAGGTGCAACTGAAGCAAAGTCAatatcaaaaataaatcaaaaccaAAAAAGGAGTGTGAGCCATACAGcgttcaaaataaaaatcaatggCTTCATGGAAACTGGGGAGATTTGTTTTCACTCATCACAGGTTCACCATCAGTCACATCTTTACAACATTTAGAGACACTGAGTTAGGGATGGAATGGCAGACAAGTTTTCACTGGGAGGTGAAAATCAAAATGGGGAGTTGAATAAGTGGATTCAATAACGCTTTCCACTGCCAAAACGAAGGAAACGTCAACCGTGTTCGTACTGTTCAACTTATCCAGTATAACATTTTGCCTGGTTGGTCTCTTCAGAGGAAAAACACTCCCAATGTTCCAAATTATTGAGTATCATTTACTGTTTGGGTTCCTTTGTTTTGGCAGTTAGCTGCAAATGGCAGAAAAGGATAAAACACTGCAGTTTGTTGTCAGGATTAAGCAGAGTTGCAAAGTGTGAGAGCAGGTCAGTTCTTCAGCACAGCGTCGTACGTCTGGTACACGTACTGAGAAACCTCGGGGGCCCGACACTTGAGGGACAGCGTGTAGTTGGGGTTGCCGGGCTGAATGCGGAGCTCAGCCAAGATCCAGATGCCGTTGGTTAGCTTGAGGGACTGGTAGAGCATATCCTGGCCTTCTACGTTTCTCTTGGCAATGGTGAAGATGTTGTTATTCTGCAGCTTCCCTGATACTGTGTCTGCATTTAGGTGGCATTCCTTTATCTGGTACTGTAGCTCATTTTCATTGGGGATGTCTTTCCAGGTAGCCAGGAACACCTGTCGCTCCATTTTTCCATCCTCGACAAAG

Function

symbol description
ap2b1 Predicted to enable clathrin binding activity. Predicted to be involved in vesicle-mediated transport. Predicted to act upstream of or within intracellular protein transport. Predicted to be located in membrane. Predicted to be part of clathrin adaptor complex. Orthologous to human AP2B1 (adaptor related protein complex 2 subunit beta 1).

NR:

description
PREDICTED: AP-2 complex subunit beta

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222528 True 2990 lncRNA 0.40 4 8739849 8746156

Neighbor

gene id symbol gene type direction distance location
zw10 zw10 coding downstream 29771 8698230 ~ 8710078 (-)
LOC120543560 LOC104952473,LOC101069911,LOC105023963 coding downstream 43898 8689379 ~ 8695951 (-)
pom121 pom121c,pom121 coding downstream 50721 8677283 ~ 8689128 (-)
tbl2 tbl2 coding downstream 64113 8666522 ~ 8675736 (-)
mybbp1a LOC106912003 coding downstream 74390 8641272 ~ 8665459 (-)
trnay-gua_53 NA coding upstream 5668 8751824 ~ 8751912 (-)
trnay-gua_54 NA coding upstream 6122 8752278 ~ 8752363 (-)
LOC120543846 LOC103360252,LOC102202538,LOC101472723,LOC102784315 coding upstream 10921 8757077 ~ 8765566 (-)
LOC120544511 LOC103375958 coding upstream 172326 8918482 ~ 8939789 (-)
alkbh4 alkbh4 coding upstream 195952 8942108 ~ 8947527 (-)
G164193 NA non-coding downstream 2346 8735379 ~ 8737503 (-)
G164188 NA non-coding downstream 15553 8721110 ~ 8724296 (-)
G164175 LOC101484903,LOC104947545,LOC103360243 non-coding downstream 108963 8627797 ~ 8630886 (-)
G164079 NA non-coding downstream 229790 8499765 ~ 8510059 (-)
G164085 NA non-coding downstream 277054 8462478 ~ 8462795 (-)
G164243 NA non-coding upstream 83715 8829871 ~ 8830426 (-)
G164267 NA non-coding upstream 169479 8915635 ~ 8926325 (-)
G164278 bckdk non-coding upstream 219253 8965409 ~ 8965767 (-)
G164282 NA non-coding upstream 229523 8975679 ~ 8976225 (-)
G164283 NA non-coding upstream 232594 8978750 ~ 8979021 (-)
G164179 NA other downstream 100688 8637714 ~ 8639161 (-)
trim37 trim37,LOC102780947 other downstream 196346 8512174 ~ 8543503 (-)
smg8 smg8,LOC102779993 other downstream 274050 8451577 ~ 8465799 (-)
rabgef1 rabgef1,LOC102778478 other downstream 359274 8368495 ~ 8380575 (-)
G164022 kctd7,LOC102776841 other downstream 387344 8346828 ~ 8352505 (-)
plekhb1 LOC107387206,LOC100711952 other upstream 1363000 10109156 ~ 10127607 (-)
LOC120543909 NA other upstream 1717055 10463211 ~ 10489164 (-)
elmod1 elmod1 other upstream 1796062 10542218 ~ 10557276 (-)
G164728 NA other upstream 2277885 11024041 ~ 11025991 (-)
G164798 NA other upstream 3101449 11847605 ~ 11850970 (-)

Expression


Co-expression Network