G164293


Basic Information

Item Value
gene id G164293
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 9008724 ~ 9183840 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU222650
TTAGAGTAGCTCCAAATCCTGATCTAGGGGATTCATTCATGATACTGCATTGCATCTCAGACATCATTAATATGTTTATGCATAATAGAACTgtgtctatctatctttctttctAGCTTCACATACATGTAAAATTTCCGGTTTTGgaaaaatacaaagtaatataaaacatatatttaaCAAAGCATTTTTTACTGTGCAGTACAAATCTAGTGTTTTACTTTTACGCCCTGTATAAAGGCCTTTTGTGCGTTCACACTGCttagcaacaaaacaacaaatcctACCAATCCAGTCAGTCACTTCCTGCAGAGTTTGAGTGACAGTCCAATTGTTGCCAGTTTTAAAGTTAACACGTTTGCCAGGCAATATTCAGAGTGCCAATCATAGTTTATATATTCCCTGTTATCCTACTGATGACGTTTGTTCCGCAGGTTGGTTTAATGAACAATTGTTTGGCTGACAAGAAGCTGGTTACAGCTATACAACCTTTACAGTCTTTtttaggagaaaaaaatcaGAGCCACTAGTTCCAGAACTGGCCTTgacagttaaaggtcccatggcatgaaaatttcactttatgagatttttttaacattaatatgcgttcccccagcctgcctatggtcccccagtggctagaaatggtgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgggccgatctggaatctcctccttatgagggatgggcaggcaaagcagagaaaggggaggtaaccttgctccttatgaccatgatagagagagacatcatggctttcaaacaagcaaagtggcagttggtcaaggctagctacagacacagaaatgacacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttgaggaaagagacttcagatacagtattaggggaccactaaggcctatataaaagcatccgaaGAACACTATGTCATGGGACTTTTAAGTAATGTGCTCTTTGGAGATGGTACCAAGAGGATGTACTCAAAGTCGAAGAGATTTGGAGGCAGAaggtttaaaacatgtttttagatGTTAACTGATATCTGGTAAACCAAAAACTATTGTTTTGCGGGTCATGGGAAAACATCTTCTTGTTTACAGTGGGCTGCTACCGTTTGGGCCTCTTTTGCATAACCTGCTGCTGTTTAGGGGCCATTATGATTTTTAAACACTGTTAGTATTTTTTCAGCAAACTGGGGGTTGCTGATGCTGGTGGGCAGGCAGAACAGAAGGCATATAATGGAAGCTTTTCCAGAAGCTTTTGGGTGATGTGGTAATGCTGTTGTAATGAGCATGTATTCATGTGCTGACAACCCTGCCCCATCCCCTATCTATCTACCCCTAAATACGGCTTACCGATAAATGAAATACATAATTTGGCTTGTTGAAAACTACACGCTCTACACGTCTCAACCCCACAGTCTGTCAGCACAGAAGGAGCTATCGGCCAAGTTGCTTGCAGGTCAGACGCATGCTTCAAGGAGGTTGTTGGGGGTTCCATTCAGGGCTTTACTTAACGATGACTATCGAGGTGCTGTGGATGGACTCCATGACAGCAGCCAGGCGACTGCACAGGTCGTGTGCCTGGTTGACATGGACTTTGGGTGGGTCTTTAAGAACTACTGTCTCAGCTGATCCGTCCAGAACCCGAGGCAGAAACTCCCCCAGCTTCACCTGCAATGAGTCATGTCCTGGCCCAGGCAGCAGCACCAGTGGCTGCGGATGCTCTCCATGGCGTCCCGGTCTTCGTGGGATAAAGCCGAGTCCCGGCTCATCAGGTGAAGGCAGGGGATGACGGCCTCGTCCATGATGGCGATGCCCTCCTCCACATTGGTCTCCTCGCCGCTGCAAAACAGCTGCGATGCACTTTCATTCAAT
>TU222653
TTAGAGTAGCTCCAAATCCTGATCTAGGGGATTCATTCATGATACTGCATTGCATCTCAGACATCATTAATATGTTTATGCATAATAGAACTgtgtctatctatctttctttctAGCTTCACATACATGTAAAATTTCCGGTTTTGgaaaaatacaaagtaatataaaacatatatttaaCAAAGCATTTTTTACTGTGCAGTACAAATCTAGTGTTTTACTTTTACGCCCTGTATAAAGGCCTTTTGTGCGTTCACACTGCttagcaacaaaacaacaaatcctACCAATCCAGTCAGTCACTTCCTGCAGAGTTTGAGTGACAGTCCAATTGTTGCCAGTTTTAAAGTTAACACGTTTGCCAGGCAATATTCAGAGTGCCAATCATAGTTTATATATTCCCTGTTATCCTACTGATGACGTTTGTTCCGCAGGTTGGTTTAATGAACAATTGTTTGGCTGACAAGAAGCTGGTTACAGCTATACAACCTTTACAGTCTTTtttaggagaaaaaaatcaGAGCCACTAGTTCCAGAACTGGCCTTgacagttaaaggtcccatggcatgaaaatttcactttatgagatttttttaacattaatatgcgttcccccagcctgcctatggtcccccagtggctagaaatggtgataggtgtaaaccgagccctgggtatcctgctctgcctttgagaaaatgaaagctcagatgggccgatctggaatctcctccttatgagggatgggcaggcaaagcagagaaaggggaggtaaccttgctccttatgaccatgatagagagagacatcatggctttcaaacaagcaaagtggcagttggtcaaggctagctacagacacagaaatgacacatcctaaggaaagctcattgtgggactggctctagtggctgtaattctgcaccaaggctgaatttgaggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtatta

Function

GO: NA

KEGG:

id description
ko00010 Glycolysis / Gluconeogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU222650 True 1960 lncRNA 0.45 4 9008724 9011611
TU222653 False 1012 lncRNA 0.40 2 9008724 9183840

Neighbor

gene id symbol gene type direction distance location
lrwd1 LOC107098205,LOC104945841 coding upstream 45807 8948415 ~ 8962917 (+)
mcama NA coding upstream 97076 8857113 ~ 8911648 (+)
tmem120a LOC104921110,LOC103360253 coding upstream 184212 8815703 ~ 8824512 (+)
styxl1 styxl1 coding upstream 194431 8804792 ~ 8814293 (+)
LOC120544310 NA coding upstream 220285 8786755 ~ 8788439 (+)
cadm1a cadm1,LOC108238063,LOC107387207 coding downstream 478082 9661922 ~ 10076292 (+)
LOC120544618 sc5d,LOC102788886 coding downstream 916031 10099871 ~ 10107367 (+)
tecta tbcel,tecta coding downstream 926605 10110445 ~ 10178772 (+)
LOC120544214 LOC103354814 coding downstream 1004696 10188536 ~ 10198514 (+)
tlcd3a LOC103354813,LOC104919172,LOC100712488,LOC101468971,LOC101174853 coding downstream 1036379 10220219 ~ 10254332 (+)
LOC120544514 NA non-coding upstream 64122 8939813 ~ 8944602 (+)
G164208 NA non-coding upstream 204534 8803884 ~ 8804190 (+)
G164163 NA non-coding upstream 309751 8698232 ~ 8698973 (+)
G164162 NA non-coding upstream 311846 8696445 ~ 8696878 (+)
G164136 NA non-coding upstream 371679 8636831 ~ 8637045 (+)
G164334 zbtb16 non-coding downstream 48850 9232690 ~ 9233949 (+)
G164335 NA non-coding downstream 52640 9236480 ~ 9236971 (+)
G164336 NA non-coding downstream 85038 9268878 ~ 9275413 (+)
G164339 NA non-coding downstream 121866 9305706 ~ 9318968 (+)
G164384 NA non-coding downstream 482996 9666836 ~ 9667798 (+)
bckdk bckdk,LOC102785460 other upstream 21132 8965360 ~ 8987592 (+)
G164156 NA other upstream 326670 8680133 ~ 8682054 (+)
LOC120544397 LOC101484903,LOC104947545,LOC103360243 other upstream 377863 8628410 ~ 8630861 (+)
kcnj6 kcnj9,kcnj6 other upstream 646281 8353458 ~ 8362443 (+)
LOC120575583 LOC101066275 other upstream 713444 8292709 ~ 8295280 (+)
G164466 NA other downstream 1024331 10208171 ~ 10208658 (+)
G164531 NA other downstream 1376803 10560643 ~ 10562266 (+)
LOC120544459 cul5 other downstream 1388525 10572365 ~ 10589296 (+)
LOC120543733 myo7a,LOC101463922,LOC102291063 other downstream 1466157 10649997 ~ 10696751 (+)
rabep1 rabep1 other downstream 1668445 10852285 ~ 10886327 (+)

Expression


Co-expression Network