G164605 (LOC105011052,LOC106603713,LOC108248158)


Basic Information

Item Value
gene id G164605
gene name LOC105011052,LOC106603713,LOC108248158
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 10657816 ~ 10659560 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU223087
GTAACAAGTTAACTCAATTGCGGGATATTGAAGGTACATGTAAACAGCTTGACCTCAATAAGGACTTAACTAGGCTGTGGCCAATTTCCATGTTACTCCCTCCACGTAAAGTGGGGAAACCGCTATCTAAACATTTGTGTCCTCTTTAAGAGTTGCAGTGGGTATTACAAAGAGGTACGAACATAGATGACGCGCTCATTGTAGCGGATGAGGAGGTTGCGGAGGATGCCAGCTTCGTTGAGGTCGCCCAGACGGATCATGTCCTCCACCCCGTGGATGGAGGTCGGGTGCATGGGCTTGATGTTGGTGGCATTCTGAGGGGAAATCCAGTGTTCACTCCCTTCGTCATCCAGAACCTGGATCTGTCCAGAGTCGCACAGTTTGACCACGGCTCCCACAGGGACGTCAAACTCTCGGCCCGTTTTAAGGTCCAACCACACATAGTCCCCCTGGATTATTATAAAAACACAGCTCtggttaaatatggacaatttCACCTAGAGTTAACACAGACAATTAAAAGACAAAACGGC

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-VIIa

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223087 True 533 lncRNA 0.48 2 10657816 10659560

Neighbor

gene id symbol gene type direction distance location
ompb omp,LOC104919181,LOC103395359 coding downstream 38312 10618757 ~ 10619504 (-)
LOC120544706 slc35f2 coding downstream 89467 10560040 ~ 10568349 (-)
LOC120544314 NA coding downstream 144095 10512542 ~ 10513721 (-)
LOC120543908 LOC103363285,LOC103395367,LOC100690133 coding downstream 212111 10327909 ~ 10445705 (-)
LOC120575563 NA coding downstream 445546 10206291 ~ 10212270 (-)
LOC120543735 LOC104919183,LOC103357773 coding upstream 37466 10697026 ~ 10716079 (-)
rsf1b.1 LOC106962404,LOC103145544,LOC103131284 coding upstream 65779 10725339 ~ 10745340 (-)
LOC120543827 LOC103357770 coding upstream 89892 10749452 ~ 10778550 (-)
vps37d vps37d,LOC103357766,LOC100712407,LOC108243620,LOC101486403,LOC102312367 coding upstream 155943 10815503 ~ 10839874 (-)
emsy emsy coding upstream 282031 10941591 ~ 10961644 (-)
G164564 NA non-coding downstream 11997 10641572 ~ 10645819 (-)
G164563 NA non-coding downstream 22578 10635016 ~ 10635238 (-)
G164562 NA non-coding downstream 24014 10633602 ~ 10633802 (-)
G164520 NA non-coding downstream 176485 10481108 ~ 10481331 (-)
G164497 LOC100689869,LOC103354810,LOC104919175 non-coding downstream 366013 10286296 ~ 10291803 (-)
G164616 NA non-coding upstream 87791 10747351 ~ 10747848 (-)
G164620 NA non-coding upstream 149074 10808634 ~ 10815239 (-)
G164631 NA non-coding upstream 181531 10841091 ~ 10841305 (-)
G164633 NA non-coding upstream 184261 10843821 ~ 10844808 (-)
G164640 NA non-coding upstream 186004 10845564 ~ 10845897 (-)
elmod1 elmod1 other downstream 100540 10542218 ~ 10557276 (-)
LOC120543909 NA other downstream 168652 10463211 ~ 10489164 (-)
plekhb1 LOC107387206,LOC100711952 other downstream 530209 10109156 ~ 10127607 (-)
G164179 NA other downstream 2018655 8637714 ~ 8639161 (-)
trim37 trim37,LOC102780947 other downstream 2114313 8512174 ~ 8543503 (-)
G164728 NA other upstream 364481 11024041 ~ 11025991 (-)
G164798 NA other upstream 1188045 11847605 ~ 11850970 (-)
pof1b pof1b other upstream 1602115 12261675 ~ 12293365 (-)
fam53c LOC101064484,LOC106511557,LOC103354649,LOC107090569,LOC102206536,LOC102303322 other upstream 1763614 12423174 ~ 12432292 (-)
sec24a NA other upstream 2171176 12830736 ~ 12864464 (-)

Expression


Co-expression Network