G164654


Basic Information

Item Value
gene id G164654
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 10940650 ~ 10940893 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU223173
tgccaGTAGGAGCCACTATAAATTCCAGAAACATTTTTTGGCTGCCTAAGCCAATTTCTGGCCAAGTGTAAGTAGATCTATAATGGTTGTACATGGCCAAAAATGCCTCATAGCACTTTATAAGACCTGAAATCTGAATGTGTTGTAGTTCAAAAGTTGGGCAGCAATGTAACCTGTAAAGTGGAAAAATCACAGGTTTGATCCCAACATCAGCAAATAGTGTCAAATTGACACTCACCTTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223173 True 244 lncRNA 0.39 1 10940650 10940893

Neighbor

gene id symbol gene type direction distance location
lrrc32 lrrc32,LOC104944766 coding upstream 12008 10920209 ~ 10928642 (+)
kcnj1b LOC103357767,LOC108243594,LOC102313312,LOC100709539 coding upstream 138562 10798318 ~ 10802088 (+)
foxred1 foxred1 coding upstream 146808 10783055 ~ 10793842 (+)
LOC120543736 LOC104919184,LOC103357772 coding upstream 222084 10715811 ~ 10718566 (+)
capn5b capn5,LOC106514630,LOC104919182,LOC101464883,LOC108248155,LOC103395360 coding upstream 294855 10593206 ~ 10645795 (+)
arhgef12b LOC103374540 coding downstream 22266 10963159 ~ 11003559 (+)
dtx2 dtx2,LOC101480294,LOC102304721,LOC103146114,LOC106924423,LOC103476279,LOC106954657 coding downstream 775835 11716728 ~ 11738396 (+)
cldn2 cldn2,LOC102201381,LOC101477941,LOC103375965 coding downstream 895722 11836615 ~ 11841717 (+)
zgc:158291 zgc:158291,LOC107387148,LOC104965395,LOC101076515,LOC103395138,LOC107697335,LOC107675183,LOC107587290,LOC105901510 coding downstream 1162892 12103785 ~ 12108468 (+)
btg4 LOC104941696 coding downstream 1435007 12375900 ~ 12378914 (+)
G164649 NA non-coding upstream 26430 10913026 ~ 10914220 (+)
G164650 NA non-coding upstream 28031 10909876 ~ 10912619 (+)
G164602 NA non-coding upstream 134779 10804622 ~ 10805871 (+)
G164588 NA non-coding upstream 192786 10747350 ~ 10747864 (+)
G164582 LOC103476346,LOC106962404,LOC107387116,LOC106907327,LOC103131284 non-coding upstream 208723 10729532 ~ 10731927 (+)
LOC120544687 NA non-coding downstream 83469 11024362 ~ 11039847 (+)
LOC120544686 gatsl2 non-coding downstream 100315 11041208 ~ 11046452 (+)
G164699 NA non-coding downstream 704134 11645027 ~ 11693724 (+)
G164749 NA non-coding downstream 761587 11702480 ~ 11704145 (+)
G164750 NA non-coding downstream 775432 11716325 ~ 11716539 (+)
mpzl1l LOC104919192,LOC102794867,LOC102196015,LOC103357763 other upstream 30897 10889807 ~ 10909753 (+)
rabep1 rabep1 other upstream 54323 10852285 ~ 10886327 (+)
LOC120543733 myo7a,LOC101463922,LOC102291063 other upstream 243899 10649997 ~ 10696751 (+)
LOC120544459 cul5 other upstream 351354 10572365 ~ 10589296 (+)
G164531 NA other upstream 378384 10560643 ~ 10562266 (+)
rcc1l rcc1l other downstream 72730 11013623 ~ 11024199 (+)
lig3 tmem248,lig3,LOC102796031,LOC102796838 other downstream 275668 11216561 ~ 11249319 (+)
klf8 LOC101477270,LOC100704719 other downstream 924708 11865601 ~ 11961889 (+)
slc25a14 slc25a14,LOC103146102,LOC106926506 other downstream 1353557 12294450 ~ 12370867 (+)
LOC120544113 LOC104924140 other downstream 1353700 12294593 ~ 12311869 (+)

Expression


Co-expression Network