G164759


Basic Information

Item Value
gene id G164759
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 11743690 ~ 11743962 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU223326
CTGTGTAAATGATATTCGGAGTCTTGTGCACCGCAAAGTCCTCCAAAAGGTTCAACTTCTGCTACTTTATTTCCCCGTGCATCATATAACCCATAGACATTAGGTCTAGGATATAACCTGTTGTCCGCTCAACCTCAACCTCTCTGTCGCCGCGCCCCTCGACGTTTTCATACACTCTGAGCTGAATGAGGCTCTGCAGTCACAACTGTTACAGAGATTAACGGTCGCAAACAGAGGAAAGTCCTCACACACCTCCCTGGAAGTAACAATTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223326 True 273 lncRNA 0.47 1 11743690 11743962

Neighbor

gene id symbol gene type direction distance location
dtx2 dtx2,LOC101480294,LOC102304721,LOC103146114,LOC106924423,LOC103476279,LOC106954657 coding upstream 5294 11716728 ~ 11738396 (+)
arhgef12b LOC103374540 coding upstream 740131 10963159 ~ 11003559 (+)
lrrc32 lrrc32,LOC104944766 coding upstream 815048 10920209 ~ 10928642 (+)
kcnj1b LOC103357767,LOC108243594,LOC102313312,LOC100709539 coding upstream 941602 10798318 ~ 10802088 (+)
foxred1 foxred1 coding upstream 949848 10783055 ~ 10793842 (+)
cldn2 cldn2,LOC102201381,LOC101477941,LOC103375965 coding downstream 92653 11836615 ~ 11841717 (+)
zgc:158291 zgc:158291,LOC107387148,LOC104965395,LOC101076515,LOC103395138,LOC107697335,LOC107675183,LOC107587290,LOC105901510 coding downstream 359823 12103785 ~ 12108468 (+)
btg4 LOC104941696 coding downstream 631938 12375900 ~ 12378914 (+)
LOC120575699 LOC103363899,LOC104924193,LOC102296018,LOC102776456,LOC104941697,LOC108250331 coding downstream 638855 12382817 ~ 12391830 (+)
LOC120575701 LOC103354648,LOC100698795 coding downstream 673549 12417511 ~ 12418379 (+)
G164750 NA non-coding upstream 27151 11716325 ~ 11716539 (+)
G164749 NA non-coding upstream 39545 11702480 ~ 11704145 (+)
G164699 NA non-coding upstream 49966 11645027 ~ 11693724 (+)
LOC120544686 gatsl2 non-coding upstream 697238 11041208 ~ 11046452 (+)
LOC120544687 NA non-coding upstream 703843 11024362 ~ 11039847 (+)
G164844 NA non-coding downstream 351617 12095579 ~ 12095824 (+)
LOC120544195 NA non-coding downstream 604975 12348937 ~ 12352185 (+)
G164894 NA non-coding downstream 745712 12489674 ~ 12541314 (+)
G165000 LOC103376870 non-coding downstream 850559 12594521 ~ 12594746 (+)
G165037 NA non-coding downstream 1063822 12807784 ~ 12808093 (+)
lig3 tmem248,lig3,LOC102796031,LOC102796838 other upstream 494371 11216561 ~ 11249319 (+)
rcc1l rcc1l other upstream 719491 11013623 ~ 11024199 (+)
mpzl1l LOC104919192,LOC102794867,LOC102196015,LOC103357763 other upstream 833937 10889807 ~ 10909753 (+)
rabep1 rabep1 other upstream 857363 10852285 ~ 10886327 (+)
LOC120543733 myo7a,LOC101463922,LOC102291063 other upstream 1046939 10649997 ~ 10696751 (+)
klf8 LOC101477270,LOC100704719 other downstream 121639 11865601 ~ 11961889 (+)
slc25a14 slc25a14,LOC103146102,LOC106926506 other downstream 550488 12294450 ~ 12370867 (+)
LOC120544113 LOC104924140 other downstream 550631 12294593 ~ 12311869 (+)
LOC120575591 LOC104924162 other downstream 585995 12329957 ~ 12347052 (+)
lcp2a lcp2 other downstream 706800 12450762 ~ 12468314 (+)

Expression


Co-expression Network