G164844


Basic Information

Item Value
gene id G164844
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 12095579 ~ 12095824 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU223435
aaataaatgtagtggagtattaaAAAGGATTACACAAGAAGTATGCCTATACTGTACTTGATTGAGTAAATGTTTTGAGGTAATAGGTGAAATTAGTTTATGCTCTTTTCCCCTCATCAATACTtcacagacgcacgcacgcacagacacacgcatacacacgcacacacactcacacagacatgcacgaacgcatgcgcgcgcgcacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223435 True 246 lncRNA 0.44 1 12095579 12095824

Neighbor

gene id symbol gene type direction distance location
cldn2 cldn2,LOC102201381,LOC101477941,LOC103375965 coding upstream 253862 11836615 ~ 11841717 (+)
dtx2 dtx2,LOC101480294,LOC102304721,LOC103146114,LOC106924423,LOC103476279,LOC106954657 coding upstream 357183 11716728 ~ 11738396 (+)
arhgef12b LOC103374540 coding upstream 1092020 10963159 ~ 11003559 (+)
lrrc32 lrrc32,LOC104944766 coding upstream 1166937 10920209 ~ 10928642 (+)
kcnj1b LOC103357767,LOC108243594,LOC102313312,LOC100709539 coding upstream 1293491 10798318 ~ 10802088 (+)
zgc:158291 zgc:158291,LOC107387148,LOC104965395,LOC101076515,LOC103395138,LOC107697335,LOC107675183,LOC107587290,LOC105901510 coding downstream 7961 12103785 ~ 12108468 (+)
btg4 LOC104941696 coding downstream 280076 12375900 ~ 12378914 (+)
LOC120575699 LOC103363899,LOC104924193,LOC102296018,LOC102776456,LOC104941697,LOC108250331 coding downstream 286993 12382817 ~ 12391830 (+)
LOC120575701 LOC103354648,LOC100698795 coding downstream 321687 12417511 ~ 12418379 (+)
zmat2 zmat2 coding downstream 348326 12444150 ~ 12447615 (+)
G164759 NA non-coding upstream 351617 11743690 ~ 11743962 (+)
G164750 NA non-coding upstream 379040 11716325 ~ 11716539 (+)
G164749 NA non-coding upstream 391434 11702480 ~ 11704145 (+)
G164699 NA non-coding upstream 401855 11645027 ~ 11693724 (+)
LOC120544686 gatsl2 non-coding upstream 1049127 11041208 ~ 11046452 (+)
LOC120544195 NA non-coding downstream 253113 12348937 ~ 12352185 (+)
G164894 NA non-coding downstream 393850 12489674 ~ 12541314 (+)
G165000 LOC103376870 non-coding downstream 498697 12594521 ~ 12594746 (+)
G165037 NA non-coding downstream 711960 12807784 ~ 12808093 (+)
G165026 NA non-coding downstream 734937 12830761 ~ 12887695 (+)
klf8 LOC101477270,LOC100704719 other upstream 133690 11865601 ~ 11961889 (+)
lig3 tmem248,lig3,LOC102796031,LOC102796838 other upstream 846260 11216561 ~ 11249319 (+)
rcc1l rcc1l other upstream 1071380 11013623 ~ 11024199 (+)
mpzl1l LOC104919192,LOC102794867,LOC102196015,LOC103357763 other upstream 1185826 10889807 ~ 10909753 (+)
rabep1 rabep1 other upstream 1209252 10852285 ~ 10886327 (+)
slc25a14 slc25a14,LOC103146102,LOC106926506 other downstream 198626 12294450 ~ 12370867 (+)
LOC120544113 LOC104924140 other downstream 198769 12294593 ~ 12311869 (+)
LOC120575591 LOC104924162 other downstream 234133 12329957 ~ 12347052 (+)
lcp2a lcp2 other downstream 354938 12450762 ~ 12468314 (+)
G165033 NA other downstream 698736 12794560 ~ 12797300 (+)

Expression


Co-expression Network