G165000 (LOC103376870)


Basic Information

Item Value
gene id G165000
gene name LOC103376870
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 12594521 ~ 12594746 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU223642
acaaccttgaggcggatgggctacaccagcagaagaccccaccgggtaccactcatctccactaaaaataggaaaatgaggctacaatttgcacgagctcaccaaaattggacagttgaagactggaaaaatgttgcctggtctgatgagtctcgatttctgttgagacattcagatggtagagtcagaatttggcgtaaacagaatgagaacatggatccgtcat

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223642 True 226 lncRNA 0.46 1 12594521 12594746

Neighbor

gene id symbol gene type direction distance location
larp1 larp1 coding upstream 5935 12529315 ~ 12588586 (+)
foxi3a LOC105026277,LOC108269392,LOC103035522 coding upstream 120586 12471784 ~ 12473935 (+)
zmat2 zmat2 coding upstream 146906 12444150 ~ 12447615 (+)
LOC120575701 LOC103354648,LOC100698795 coding upstream 176142 12417511 ~ 12418379 (+)
LOC120575699 LOC103363899,LOC104924193,LOC102296018,LOC102776456,LOC104941697,LOC108250331 coding upstream 202691 12382817 ~ 12391830 (+)
LOC120544088 LOC102798793,LOC104924243,LOC101475378,LOC100699679,LOC101078553,LOC103363335,LOC108238083,LOC107386699 coding downstream 17110 12611856 ~ 12632887 (+)
pitx1 pitx1,LOC100690583 coding downstream 153221 12747967 ~ 12760276 (+)
LOC120575626 NA coding downstream 203251 12797997 ~ 12800012 (+)
sar1b sar1b,LOC107713617,LOC107603246,LOC102795722 coding downstream 270501 12865247 ~ 12874039 (+)
cdkn2aipnl cdkn2aipnl,LOC102794961 coding downstream 520137 13114883 ~ 13116904 (+)
G164894 NA non-coding upstream 53207 12489674 ~ 12541314 (+)
LOC120544195 NA non-coding upstream 242336 12348937 ~ 12352185 (+)
G164844 NA non-coding upstream 498697 12095579 ~ 12095824 (+)
G164759 NA non-coding upstream 850559 11743690 ~ 11743962 (+)
G164750 NA non-coding upstream 877982 11716325 ~ 11716539 (+)
G165037 NA non-coding downstream 213038 12807784 ~ 12808093 (+)
G165026 NA non-coding downstream 236015 12830761 ~ 12887695 (+)
G165062 NA non-coding downstream 323687 12918433 ~ 12930274 (+)
G165076 NA non-coding downstream 485033 13079779 ~ 13124053 (+)
G165078 NA non-coding downstream 526063 13120809 ~ 13121842 (+)
lcp2a lcp2 other upstream 126207 12450762 ~ 12468314 (+)
slc25a14 slc25a14,LOC103146102,LOC106926506 other upstream 223654 12294450 ~ 12370867 (+)
LOC120575591 LOC104924162 other upstream 247469 12329957 ~ 12347052 (+)
LOC120544113 LOC104924140 other upstream 282652 12294593 ~ 12311869 (+)
klf8 LOC101477270,LOC100704719 other upstream 632632 11865601 ~ 11961889 (+)
G165033 NA other downstream 199814 12794560 ~ 12797300 (+)
G165043 ddx46,LOC102797024 other downstream 222485 12817231 ~ 12820709 (+)
gabra6b NA other downstream 2267915 14862661 ~ 14901003 (+)
G165556 yipf5,LOC102777143 other downstream 3361734 15956480 ~ 15958135 (+)
G165702 NA other downstream 3990396 16585142 ~ 16626346 (+)

Expression


Co-expression Network