LOC120544326 (bod1,LOC103369971,LOC101484775,LOC100697254,LOC102215513,LOC102291330,LOC102786418,LOC105939389)


Basic Information

Item Value
gene id LOC120544326
gene name bod1,LOC103369971,LOC101484775,LOC100697254,LOC102215513,LOC102291330,LOC102786418,LOC105939389
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 17342780 ~ 17362284 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU225002
TACCCAAAACTACAAGCTCCGACGGCCCAGCTAGCATTCCTTGTAGCTAGCCAGCAGGTACGTAACTAACAAGCAAACCTTTACTTCGGTTTGGCATGGCGGAGGGTAGCGGTAACGTTAACGTCGGTGCGGCCAACCTTCCTCCGGGAGACCCACAGCTGATCGGTATGATTGTGGAGCATCTGAAGAACCGGGGGCTTTTTGATGAGTTCCGTCGGGACTGTCTCGCCGACGTTGATACGAAGGTAACGTCAGCTAATGCTACCTTGCTTCTTTTGTGGTTTACGTTAACTTTAGCatatcattacttagaattggtatgtagctaacgttagttattgACTCGTTGCTGATTTAATTGGAATACATGTAGCAGTGTGTTCCTTCCCTTGTTGCTACAATATACTTTTCAGTATATGTACTATGATGTCCCTGTCATTGCTGCCAGCCCGCCTATCAGAACCTGCGACAGAAAGTTGACAACTATGTCACGTCGCACCTGAGCACACAGGATTGGAACCCGTCTATCAACAAGAACCAGATGAGGAACGGACTGAGACAAAGTGTTGTTCAatcAGGTATGCTGGAGTCCGGTGTGGACAGGATCATCACCCAGGTTGTGGACCCCAAGATGAACCACACTTTCCGGCCGCACATAGAAACTGCCATCCATGATTTCTTGTCAGGGGACAGGAAGGAGGAGAACGCCTTGTGTCCTAACTCTGCACTGCCTGAACAGACGGAACTACAGGAAGCTCCGTCTGCTTCTGGCCCCCAAACCCCCTGAGGTctgtttttaaaaactgaaatacaaTGTACACATGCTGGTCTACACATAATGTTGTATGGGTGGCCTTTTGAAATGTGCAGCATCAGACAAGaggacaaagaagaagaagaggggatTGTTTCCTGCTACCTCTGTTTAAAAGACTGGAGTCAGGAGCCTGGAGTGtttctgcattcaaaatgttcaGCATGAGATGTTGTTTCATTGCCCGTCTGTGCTGCACAAGGCTACTGCTGGAGAAGTTGGACAATGCCTGCTCtgcctataaaaaaaaacatggcacaAACCTGgattattagtttttatttttttatatgcaagttgtatattgtatatttctCACTCaggctgtttgtgtgtattttccaCAGATAACATGTTGCCTAACAATATGTTAAACTAAAGAAACTACACTGATTCAGAATGATAAGTGAAGTCAATGTTCTGGTTCCAGTTAGGAGGAttagaggaaggagaggcttcATTTTATTCTTACTCAAATTTTTGAAAGACATTcatgtaaatatgttttgatCAGTATCTAGAGGTCTTCATTTTTCATCAACCGTGTCCGATTTCCTTTTGGTGCCTGTATTTAGTATGTAGCATTGGTTGTGCATCCTATGTGCTTTACTAAACACAATTGGCATCATGTTTCTCTGTGTTCTTTTTCTTATTATACCAATTTATAGTTCCTGTGCCTTTATTAGTAAAGATACTCTAATGTATGTAAAGCTATTGGGTAAGTTTATGAAAATATGGAAGCCACACAGTCAATTGTT
>TU225020
tgttCTACTTGAGCGATCACATTTCATACAGACCCCAGGTTTCAAGCTATGTTTTgtaagtttttatttaaattaatctaaaaaaaacaaacatttgtaaGCATTTTGATTGAAGTTAAATAAACTACAATGGCATcactggagagagagaagtgtgttAATTAGTCAGCCCTGTGCTGTAAAATAGTTCTTCACACAAATTTACAGTACAGCATCTCTGATGGTATTAAATGTTAGGCATCCTGCCACCTACTGGCGCATCTGTGGCAATGCCTCACAACAATGCATCCCTCAAAATATTGGAAATATTCACCTTTATTCTATCAAACATTGGTTAGCATTCACACAGTCTTTGACTCAACATGGCAGACGCCCTTTAAAGGATCATTAAGTAATCAGATTTCTAAATCTGTTGTCTGGACGACCGAAGGAAGAAAGGCACAAAGTAAACTCCCTAGTAACTAACAATGGTGAGAGCAGACAAACGTGCACACTTTCTcagttgaacacacacacagattgtaATTTTACAAAAAGTAAACAAAGTGAGGGTTATTGCACACTATGGCTTTGACCCTGGTTAGTTCTGAATGCCAGATGAAGTATTAAGGCCTTAGTATGCTTCAAAGTGTTTTTCTAAACAGTCACTTTGTGCAGCGTCGGATCAGATGTGCAGAGGTGTGAAAGTAGGCAGGATTTGAACTTGAGTGCTCTACTGCAGTCACTTTTCATGAAACACCGTGAAAGCCTTCAAGTCACTCAAAAGTCACAGTTCTTAGAGATAGTCGGATGAGGCTATGACAGGTGGCTTCTTTGCCCTTGCTCCGAATGCGGCCATTTGCAAAAAGTATAACAACTTTTACCTTTAGACATGGTTGAACACCACAAGTTTGTTTAAAGCATGCAAAGGCTTTAACCCTATCATTGTTGTCGCAAGAAACCTCATCACAATACCAGATACAGTTTACCCTTCATACCCATTTTATAAACCCACATATTGCATATTGTTCAAGCTAAATAAGAAGGTGCTACACAAGATGAAAGGTTTTCACTTGACACTATGTGCGGCAGTCCAGTCTCAGGACTTTTTCTAACTCTCCATGTAGTCCAGCTTTGACTTCATACCTGCTAAAATCCTTGCGGTAACTTTCTGCTGAGTGAAATTAAGTGGAAAACATTCTTCCTGAAGCCTGGGTGCATTCTTTAGCTAAATCCATCAAGCTAAATGAAGGGGAAGATACGTTTCTTAAGGATGTAGAGGACGGTGGCGAGGAAGAGGGCCAGAGCCAGGAAGATGAGCAGCTTGTCTGTCAGCTCCCGCCGGTTGTACTTGAGGATCAGTTTCCTCCCCAGGTGGATTGTTCCTGTCATGCTTTTAAACTCGTCGTTGGTTTCCTGCACCGTCCTGGAGGAGGTGGCCAGCGTGCCAATGGTGTCCTCGCTCTGCTTCACCTGTTCAGCCATCATCCTGCTCATAGACATCAGATTCTCTGTGATGCTACTACTGGTTTCTACTAGGCTTTCTTTGGTCGCCTTCCTCTGTCTGGTGCTGTGGTTTTCTACTCCATGCAGCAGCTCGTCCTTCTCCGTGTTGTCTATGGCTAGTTTACATGCCAGGTTAGCTTTCCTCCACGCTGTTTGGTTACTCAGCATTTGCTTTCgct
>XM_039777976.1
TAACAAGCAAACCTTTACTTCGGTTTGGCATGGCGGAGGGTAGCGGTAACGTTAACGTCGGTGCGGCCAACCTTCCTCCGGGAGACCCACAGCTGATCGGTATGATTGTGGAGCATCTGAAGAACCGGGGGCTTTTTGATGAGTTCCGTCGGGACTGTCTCGCCGACGTTGATACGAAGCCCGCCTATCAGAACCTGCGACAGAAAGTTGACAACTATGTCACGTCGCACCTGAGCACACAGGATTGGAACCCGTCTATCAACAAGAACCAGATGAGGAACGGACTGAGACAAAGTGTTGTTCAatcAGGTATGCTGGAGTCCGGTGTGGACAGGATCATCACCCAGGTTGTGGACCCCAAGATGAACCACACTTTCCGGCCGCACATAGAAACTGCCATCCATGATTTCTTGTCAGGGGACAGGAAGGAGGAGAACGCCTTGTGTCCTAACTCTGCACTGCCTGAACAGACGGAACTACAGGAAGCTCCGTCTGCTTCTGGCCCCCAAACCCCCAGCATGCCGGCCAACTTGTCCGCTGTGTTTTTTCTGCTCCTGGCCTGTCAACAGACTGTGTTGACCATGGATCAGCATGATGTCCTGGAGAAACAACTAACCAAAAGACGCCTCTCTCTGCAGGGCACAGCGGAGATTCAGAGTTGCCTGGTGAGTTCAGGGGATGTCGGTTGTGGGACATTCCAGTGTTTCAACAACAACTCCTGTGAAATCCAAGGGCTGCACCACATCTGCCTCACTCTGCTGCACAACGCTGGGCGCTACGACTCACAGGGCAAGTCATTTGTGAAGGATGCGTTGCGGTGCATGGCGCTGGGACTGCGGCAGCGCTTCAGCTGTGTGAGCCGCCGGTGTTCAGCGGTAAAAGAGATGGTGTTCTCGCTCCAGAGAGATTGCTACTCCAAACACCAGCTCTGCCTGGCGCTAAGAGACCACATGGATACCATGGGCAACCTGGTTCAATTCCACCTGATGTTTCCCTCGGGACCGTACGTGGAGCTGATGAACTTCCTGTTGAAGTGTGGAGACGAGGTCGGGTTGTGGGTCGGCCAGCGGCTGCGCGGGCAATGCATGCAACACTGGGGGGCGCTGTGCAGCAGCTTCGGCAGCACCTGCTCTCTCAGCCAATCGGACGCTCCGCAGCACACCACCACCCCACCACCCACTGTGCCCTTGGCTTTCACCACTCAGGGACCCCTGCAGCAGCCAACCAGAGCAGCCGGACCAGAGGACAGGACCGGGTTTAGTCAGATCGacaacgcgacagaatctctcCCCGTGTCTAAGAAATCCAATGTTACTGCTTCCTAAACAGACAGACGAGTTATACAGAGTTGCAGACAGGGTACGCAAAGATCAAGCACTTATTActattatacagtataatatataAGTAGTAGAATGAGTAAAAGTAGTGGTAGTGGTTTGGTGTTGAATTGCTGGTGAAAGCAATGCAACATAACTTATTTAATCTGTTGGATATTTGTGCTATATTAATATTTTCCTTTACACTTGACTTTGTACAAGGATGAAAACCAATTATCTACCTCACTTCAACATAACAGTACACCACAGTGGCTGTATGCTTCAGCAAAGGGCATGGACGCACACGAGTTAACACTACAGGGAATCACTCCTCAAGTGCAGCTGATGGCTCAGAGTCAGTATTCTACCTatttaaatctgtttttgtaTATATGAGGATTGTTATGGGCACCATAAAGTTGACAGGTTATCAAAAGTTATCTTGTAGTCAGTCAGGGTGCAGTCTGCAAGAAGGGAAGCACTCTTTGGTTATCACGtgttataaatatgtatttttaatgttCTACTTGAGCGATCACATTTCATACAGACCCCAGGTTTCAAGCTATGTTTTgtaagtttttatttaaattaatctaaaaaaaacaaacatttgtaaGCATTTTGATTGAAGTTAAATAAACTACAATGGCATcactggagagagagaagtgtgttAATTAGTCAGCCCTGTGCTGTAAAATAGTTCTTCACACAAATTTACAGTACAGCATCTCTGATGGTATTAAATGTTA

Function

symbol description
bod1 Predicted to enable protein phosphatase 2A binding activity and protein phosphatase inhibitor activity. Predicted to be involved in negative regulation of phosphoprotein phosphatase activity. Predicted to act upstream of or within cell division. Predicted to be located in chromosome; cytoplasm; and cytoskeleton. Predicted to be part of outer kinetochore. Predicted to be active in centrosome; spindle microtubule; and spindle pole. Orthologous to human BOD1 (biorientation of chromosomes in cell division 1).

NR:

description
PREDICTED: biorientation of chromosomes in cell division protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225002 False 1572 lncRNA 0.43 3 17342780 17346802
TU225020 False 1664 TUCP 0.42 4 17359132 17362284
XM_039777976.1 True 2074 mRNA 0.48 7 17342846 17359367

Neighbor

gene id symbol gene type direction distance location
LOC120543786 rnf145 coding upstream 146499 17176441 ~ 17196281 (+)
il12bb NA coding upstream 175332 17163715 ~ 17167448 (+)
LOC120544081 NA coding upstream 220966 17110867 ~ 17121814 (+)
LOC120544325 LOC104933051,LOC104966984,LOC100710405 coding upstream 363070 16963959 ~ 16979710 (+)
LOC120544388 NA coding upstream 449324 16890450 ~ 16893456 (+)
LOC120543932 NA coding downstream 102123 17464407 ~ 17467578 (+)
asl asl coding downstream 127728 17490012 ~ 17498266 (+)
LOC120544634 NA coding downstream 163362 17525646 ~ 17527150 (+)
trnat-agu_7 NA coding downstream 164951 17527235 ~ 17527308 (+)
slc13a2 slc13a2,LOC108238977,LOC106523460,LOC103362294 coding downstream 172950 17535234 ~ 17544619 (+)
G165905 NA non-coding upstream 180332 17161933 ~ 17162448 (+)
G165865 LOC103376153,LOC104933044,LOC106917154,LOC105916235,LOC103138852 non-coding upstream 387500 16948670 ~ 16955280 (+)
G165849 NA non-coding upstream 421538 16917859 ~ 16921242 (+)
LOC120544389 NA non-coding upstream 452444 16885988 ~ 16890336 (+)
G165764 dpp3 non-coding upstream 477120 16864145 ~ 16865660 (+)
G165995 NA non-coding downstream 38325 17400609 ~ 17409951 (+)
G166000 NA non-coding downstream 67957 17430241 ~ 17430648 (+)
G166024 NA non-coding downstream 144555 17506839 ~ 17507735 (+)
G166028 LOC104958813,LOC105939289,LOC101064037,LOC102197733 non-coding downstream 148893 17511177 ~ 17514560 (+)
G166032 NA non-coding downstream 166424 17528708 ~ 17530096 (+)
LOC120544493 LOC103370065,LOC101073234,LOC102787924,LOC100696184 other upstream 57438 17198697 ~ 17285342 (+)
ubtd2 ubtd2,LOC102788971,LOC100712015 other upstream 182635 17145476 ~ 17160145 (+)
fgf13b LOC104966980,LOC101465170,LOC103376159,LOC100710934,LOC108238960,LOC103138886,LOC103475676,LOC107084161,LOC106524025 other upstream 322364 16995758 ~ 17020416 (+)
LOC120544384 LOC100708800,LOC102793722,LOC102204659,LOC102301331,LOC103375969,LOC101471849,LOC101156840 other upstream 505609 16809886 ~ 16837171 (+)
LOC120544324 NA other upstream 588491 16736664 ~ 16754289 (+)
LOC120575677 LOC103362304,LOC102306182,LOC100703890 other downstream 307831 17670115 ~ 17685280 (+)
G166064 NA other downstream 392587 17754871 ~ 17766415 (+)
LOC120543551 LOC104929447,LOC101164739,LOC103354082 other downstream 1113875 18476159 ~ 18477783 (+)
ccdc169 ccdc169,LOC104928215,LOC103354101,LOC102289504,LOC102794168 other downstream 1691859 19054143 ~ 19061286 (+)
G166610 NA other downstream 1849138 19211422 ~ 19215527 (+)

Expression


Co-expression Network