G166028 (LOC104958813,LOC105939289,LOC101064037,LOC102197733)


Basic Information

Item Value
gene id G166028
gene name LOC104958813,LOC105939289,LOC101064037,LOC102197733
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 17511177 ~ 17514560 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU225070
atgttttcatcgaatcgaatgtgtctgtagcttgaaacaagctactgCAAACCGGTGATTAGCTTGTAATACTAGTAGttggggcagagggtaaatcgctatttctacaccaccaTCTACttaaggctcaaaatagcaccacacttccaacggtagcataatgagggtccctacatgtaaaccgaagcattgagaactttgtaagtgtacagacagtttaaataatgtaaaaagatagattataaagacgtagcgttcatgtttacatgcggccgccatcttgggaaaaagGTCATAaccagtcgaaccacgaacaccgtgcaaccagtaaccagtaacatagctcaagcaggGCGTTCGTgatgcatgaaaacatatcccagagaacggtcgactcggtacacatatatgttattaacccctaggttcattttgcaccggaattgtcctttaagttaTCAGAGAAACAAGCAGAGAAAACGTTAGTGGCAGCTTGTCGTTTGTCCATCAAAGAAACGTGAAATTGATTATTCAATGCTTTTAGTTTGGTCTTAATCACCTGCTCCCTTTGTTTTAGAGAGGAGGGGACCTCTGTGGATAATTTGGCTTCCGGTAAAAAACTCCTGAGTGATGAACACTGAAGGAATCGTATACCGAGAGAAGCTGACTACAATGACGGCAATGGTGGAGAAGACAACCGTGGTCCCACACTACTTCAAGACATCACCAAACTGGGTCTTTTATAGTTTTGATTAAGAGCCCCCTAGCAGCAGAAAATGACGTATTGTGGGTTTAACGACTctgctgtgcgtgtgtgtgcaatgtCTGTTGTTAGGGACCTTGTTATCTGATGAGAAGACGTAGAGAGCCAGGGGTTTCTCTCCTTTGTTGATAAACTTGATTGCTTCGTCCAGGCTGCTGACCGACAAGATGGGAAGCAGAGGTCCAAATATCTCCTCCTGCATCACCTTCGCCTCTGGCTTCACGTCCCGCAGAACTGTGGGGGCTATGTAGCAGTCTGACTCGTCGTTGTCTCCGCCTACAGCGATGGTGCTGTCTTCCATCATGTTTATTATCCTCTTGAAGTGGCGCTGGTTGATGATGCGTCCGTAGTCAGGGCAGGTCTTTGGGTTGTCCGTGTAGAACTCCTTTATGGCCTTCTTGACCTCTTCGATGACCCGGTCCTGGATGCTGGGGTCACACAGGATGTAGTCGGGGGCGATGCATGTCTGACCACAGTTTGTGTACTTTCCCCAGGCAACACGCCTGCAGGCTATGGTGATGTCACAGTTCCTGTCAATGTAGCAGGGGCTCTTGCCGCCCAGCTCCAGGGTGACAGGCGTGAGGTGTTTGGCAGCAGCCTCCATGATCAGTTTGCCCACCACGCTGTTGCCGGTGTAGAAGATGTGATCGAACCTCTGACGCAGCAGCTCCTGGGTCTCTGACACTCCTCCAGTTACTACGGGGTAAAGCTCCTGATGCATAGGGTAG

Function

NR:

description
PREDICTED: fatty aldehyde dehydrogenase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225070 True 1491 lncRNA 0.48 4 17511177 17514560

Neighbor

gene id symbol gene type direction distance location
asl asl coding upstream 12911 17490012 ~ 17498266 (+)
LOC120543932 NA coding upstream 43599 17464407 ~ 17467578 (+)
LOC120543786 rnf145 coding upstream 314896 17176441 ~ 17196281 (+)
il12bb NA coding upstream 343729 17163715 ~ 17167448 (+)
LOC120544081 NA coding upstream 389363 17110867 ~ 17121814 (+)
LOC120544634 NA coding downstream 11086 17525646 ~ 17527150 (+)
trnat-agu_7 NA coding downstream 12675 17527235 ~ 17527308 (+)
slc13a2 slc13a2,LOC108238977,LOC106523460,LOC103362294 coding downstream 20674 17535234 ~ 17544619 (+)
cryba1b LOC103139184,LOC104958815,LOC104934409,LOC103475646,LOC103362292 coding downstream 54210 17568770 ~ 17570951 (+)
LOC120544640 LOC103362291,LOC104958819,LOC100699206,LOC103139201 coding downstream 58056 17572616 ~ 17614138 (+)
G166024 NA non-coding upstream 3442 17506839 ~ 17507735 (+)
G166000 NA non-coding upstream 80529 17430241 ~ 17430648 (+)
G165995 NA non-coding upstream 101226 17400609 ~ 17409951 (+)
G165905 NA non-coding upstream 348729 17161933 ~ 17162448 (+)
G165865 LOC103376153,LOC104933044,LOC106917154,LOC105916235,LOC103138852 non-coding upstream 555897 16948670 ~ 16955280 (+)
G166032 NA non-coding downstream 14148 17528708 ~ 17530096 (+)
LOC120544639 NA non-coding downstream 49156 17563716 ~ 17565417 (+)
G166042 NA non-coding downstream 71881 17586441 ~ 17606988 (+)
trnaw-cca_17 NA non-coding downstream 116081 17630641 ~ 17630712 (+)
G166049 NA non-coding downstream 120209 17634769 ~ 17635430 (+)
G165984 tcerg1,LOC102783943 other upstream 20489 17349566 ~ 17490688 (+)
LOC120544326 bod1,LOC103369971,LOC101484775,LOC100697254,LOC102215513,LOC102291330,LOC102786418,LOC105939389 other upstream 148893 17342780 ~ 17362284 (+)
LOC120544493 LOC103370065,LOC101073234,LOC102787924,LOC100696184 other upstream 225835 17198697 ~ 17285342 (+)
ubtd2 ubtd2,LOC102788971,LOC100712015 other upstream 351032 17145476 ~ 17160145 (+)
fgf13b LOC104966980,LOC101465170,LOC103376159,LOC100710934,LOC108238960,LOC103138886,LOC103475676,LOC107084161,LOC106524025 other upstream 490761 16995758 ~ 17020416 (+)
LOC120575677 LOC103362304,LOC102306182,LOC100703890 other downstream 155555 17670115 ~ 17685280 (+)
G166064 NA other downstream 240311 17754871 ~ 17766415 (+)
LOC120543551 LOC104929447,LOC101164739,LOC103354082 other downstream 961599 18476159 ~ 18477783 (+)
ccdc169 ccdc169,LOC104928215,LOC103354101,LOC102289504,LOC102794168 other downstream 1539583 19054143 ~ 19061286 (+)
G166610 NA other downstream 1696862 19211422 ~ 19215527 (+)

Expression


Co-expression Network