LOC120543536 (LOC104931089,LOC104947899)


Basic Information

Item Value
gene id LOC120543536
gene name LOC104931089,LOC104947899
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 5163005 ~ 5163949 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776636.1
TTGATGGAAAACTACACCTACAACAGCTTTACCCTCAAACTGGAAGGGTTTAAGGTTACAGAACTGTCCATGTAccctgtctttctctttttctttttctcctaccTAATTATTATATTAGCAAATGTTGGCATTGTAGTCCTGATTTTCATGGACAAAAGCCTTCACCAGCCCATGTATCTGCTTTTCTGCAACCTGCCGGTTAATGACATTATTGGAAATTCTATCTTGCTGCCCCGTTTATCTTCAGATATCTTGCAGTCTTCATTTGTGCACATAATCAGTTATTATGAATGTGTGATTCAAGCTTTTACCATACACATATATGCAACCACTTGCCACACAGCGCTCATGATTATGGCCTTTGACAGATATGTGGCCATCTGCAATCCCCTGCGCTATGCTGCCATAATGACCAACAAAATGGTGATCAAGCTGACAGTTTCTGCCTGGGGAGTGGCCTTTGTGTTGGTCGGGATTCTGCTCGGTCTGACCATACGGCTGAACCGATGCAGGACTCTGATCACAAATCCTTACTGTGACAATGCCTCACTGTTTAAACTCTCCTGTGAGGATGTGTTCATTAATAATGTCTATGGCCTGGCTTTCACTGTAGTTCTTTTCACAGGTTCAATCGGCAGCATGGTTCTCACCTATACTAAGATTGCAGTAGTGTGTCTCACCAGTAATAACAAGTCTCTGAACAGTAAAGCCTTGAAGACCTGCAGCACTCATCTCTTTGCATATCTAATTATGTTGTCGAGTGGAATGCTTGTCATTATCCTGCATCGCTTCCCTCAGTATTCAGACTACAGAAAACTGGCCGCTATTTTGTTTCACATCATCCCCGGCTGCCTTAACCCCATTATTTATGGCGTGCAGTCTAAAGAGATTCGGAAATTCCTGTCACAATGGTTCCAGTTGAGAAAGGTTTTGCCATCATAA

Function

NR:

description
PREDICTED: olfactory receptor 146

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050911 detection of chemical stimulus involved in sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776636.1 True 945 mRNA 0.43 1 5163005 5163949

Neighbor

gene id symbol gene type direction distance location
LOC120544291 NA coding downstream 61522 5100548 ~ 5101483 (-)
LOC120544290 NA coding downstream 69856 5092205 ~ 5093149 (-)
LOC120544289 NA coding downstream 79551 5082510 ~ 5083454 (-)
LOC120544286 NA coding downstream 88314 5073756 ~ 5074691 (-)
LOC120544284 NA coding downstream 100020 5062035 ~ 5062985 (-)
LOC120544301 LOC104947899,LOC104931089 coding upstream 5122 5169071 ~ 5170024 (-)
LOC120544302 LOC104931089,LOC104947899 coding upstream 9365 5173314 ~ 5174267 (-)
LOC120544303 NA coding upstream 22054 5186003 ~ 5189027 (-)
serpinf1 serpinf1 coding upstream 132012 5295961 ~ 5315558 (-)
LOC120575590 sap30l,sp30l,LOC105890504 coding upstream 326113 5490062 ~ 5508288 (-)
G163456 NA non-coding downstream 6846 5155837 ~ 5156159 (-)
G163450 NA non-coding downstream 219614 4943176 ~ 4943391 (-)
G163447 NA non-coding downstream 260688 4902063 ~ 4902317 (-)
G163444 NA non-coding downstream 273164 4889635 ~ 4889841 (-)
G163423 NA non-coding downstream 348634 4806490 ~ 4814371 (-)
G163460 NA non-coding upstream 32712 5196661 ~ 5197174 (-)
G163517 NA non-coding upstream 43546 5207495 ~ 5208147 (-)
G163527 NA non-coding upstream 67841 5231790 ~ 5232680 (-)
G163535 NA non-coding upstream 100388 5264337 ~ 5266415 (-)
G163536 NA non-coding upstream 101027 5264976 ~ 5265413 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 341133 4281773 ~ 4821872 (-)
G163315 NA other downstream 342506 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 412575 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 468389 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 669654 4491005 ~ 4493351 (-)
G163767 NA other upstream 2093189 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2166965 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 2697504 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 3182879 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 3204546 8368495 ~ 8380575 (-)

Expression


Co-expression Network