LOC120543578


Basic Information

Item Value
gene id LOC120543578
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 8773824 ~ 8779122 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776701.1
ttattcGCGATCTTATGTTGAAAAAcaacactacccacaatcctaagcgttgCAACGACGTCATTGTTTGGTTCAAGAAgctgttgccatggaaatgtttacagTTCCATGTACCGTGAACGGCGAGAGCGAGCAACTACAATAGAAGTCTATGAtagtttcaaaatgttttttttagcgCCAAATCCATTATCACTGACCACCACCAAGATAAAAGAAAACGAATCGCGGCACGAAACGACCAAAGGGGGGAGccgagaaaaagagagagaaaacaaagcttCTGTTTCACAAACGCCAGTATACAACGAAAAATCATTGAGAAAATGTTTAGCTCCATTTTTGGACAAAACTTCTTTACAAGACATCGGTCTTCAGGAGATATGGACTCTTCTTCGAAGAAGTCCAAACGAAGGCGTGAGAGACCTTCGTCTCCTGAAGACCTCAACCCTCCCACCATCTTGAGGGAGCACGGACGAAGGGGTGAGAGACCTTCGTCTAGTGGAGGCACCAACCCTTCTACCATCATGAAGGGGCACAGGGAAAGGGGTGAGGGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTATCACCAGGCAGCAAGAACGAAGGGATGTGTACTCTTTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGGCGAgagctctttgtcttcctcttctgAAGATGATGAGCCTTCTCCCACCAGGCAGCGAGTACGAAGGTTTGAGAGCccttcttcttcatcctccaAAGACAAGCAGCCTTCTACTCCAAGGCGGAAGCAAGCATGGAGGGGTGAGAGCCCTTCATCGTCATCTTCTGAAGATGACCAGCATTGTACCACCAGGCTGCGAGTACGAAGGTTTGAGAGCCCTTCCTTTTTATCCTCTGAAGGCAAGCAGCCTACTACTCGGAAGCGGCAGCAAGCATGGAGGGGTGAGAGCCCTTCATCGTCATCTTCTGAGGATGACCAGCGTTCTACCTTAAGGCTGCAAGTACGAAGGGATGTGAGCTCTCTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGAAGAgagctctttgtcttcctcttctgAAGAGGATGAGCCTTCTACCACCAGGCAGCGAGTACGAAGGTTTGAGAGCCCGTCCTCTTCATCCTCCGAAGACAAGCACCCTACTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGCTCTTCGTCGTCATCTTCTGAAGATGACCAGCGTTGTACCACCAGGCTGCGAGTACGAAGGGATGTGAGCTCTTTGTTCTTCGTAGGCACAAACATGAAGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACACGCCCTCTACCACCAGTGCAAGAAAGGAGACGGAGATCATtgaaagagaaaagcagcatttggaggaggagggtttaaaaagagaaagagagaggtgtgaaaagatgaagagaaagaaccaggagaaggagaggaaaatgTTTAGTCCGCGTTCAAGAATGTACATTTGGTGGCTCAGTTGCAAGATAGACAACATTGCCAGGGACATCCAATCGACCTTTGTGGATGAGCGCTACCTCCTGCGTCATGATCCCCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGCTTGACCGAAGGAGGGAGCTGGTCGTGTACAAACGCAGACAAGAATTTAAGGTGGAGAGGGAAGTGAGGAAGCAAAGACTGAAGGTAGAGAGGAAGGAAATAAATGCGAAGAAGATGGAGAATATCTCTGAGTTATGGAGCAACTCAGAATACCCAGCTCTGTTAAATTTTCTCTACGGACCAATGCCAATCAggtcacatatatatataaattaagaTAAAAGTAGAGCAATCAGAAAAATGGCACCAAATAGAGAGAGGTAATTGAGGGAGACGGCAAACATTTCAGATTTGACAAAATAGaagtaaagaaaagtaaaatatttttttaaacattagcaACCACCATCAAATATCCTTGTAACCACATGATAACACCCTAGATGTTGGCTTTAATTTAGTTATACAGTCAAAGAGCATTGTGCCAATAACAGTGTCCTAACTTAGCGCCACCTGACCCAATTTAATTCATCCTAACCTAGGCTAATTTAACCAAGGTTAGCCCAACACCTATCCTAATTTAGCTTTGGTTAGGCTCTGGCAGAGaccttagggttagggttagaccctaaagacagtagaaagaagaaagtaaggcaagaataggttgaaaatagtaataaaaacttataaaaaaaaacagtagaaagaaggaaggcaacactagggcgacaaaagtgaaaaattcaAATAGCCTAAGTGACAAACTTTGTAAATTAGCAgaataaaactttgaaaaaaagagacaaaaactttgaagaagggctcccggttagctcagttggtagagcgggcgca
>XM_039776702.1
AACTCTCCTGATAAGCTACACGACAATGAGCCTCAGTctttataagacattttaaaaatgtctggGACTCTGCTTCTTTCTCCAATCAAATCCATACAATTTGccattttaattaattgaatTAAAACTTGAAACTAAAACTTACAGCTAGCTAAGTTAGCTTTAATTGATACCATTAACTTTTCCCAAACGATCAAAAGAATCAACTAGGAAGTACAAACAGGGAGTGTAATGAAGAATGAATTATTTCAGGCTCAGTAAAAATATAAGCAGTGAGTGTTATAAAGACTTATTTCATTCAGACGTACCAgaaatactgtaggctacgATCACCGGAGACCTCCGTTGACCGCAGCGGTAGGTTCAGCTTTGAATGTCGGCGTGTGATTGGTAGGCGGTCGGCGAATCCTACGTTTCCAATTGGTAGTCTGAAGTCAAACGGAGCGATTTAATTGGGGGAGACTACGGTCAGTCGACGAATCAGAACGCATAACTGAACGTACACTTTGCACAACGGTAGACTCAGCCTGTGCTTTTATTTAAaatccaaaacaaaacaaagcaacagAACTACAGTGGCACACAGAGTTCCTTTCAAAACAATCCTTTGGAGAGTTTCACAAACGCCAGTATACAACGAAAAATCATTGAGAAAATGTTTAGCTCCATTTTTGGACAAAACTTCTTTACAAGACATCGGTCTTCAGGAGATATGGACTCTTCTTCGAAGAAGTCCAAACGAAGGCGTGAGAGACCTTCGTCTCCTGAAGACCTCAACCCTCCCACCATCTTGAGGGAGCACGGACGAAGGGGTGAGAGACCTTCGTCTAGTGGAGGCACCAACCCTTCTACCATCATGAAGGGGCACAGGGAAAGGGGTGAGGGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTATCACCAGGCAGCAAGAACGAAGGGATGTGTACTCTTTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGGCGAgagctctttgtcttcctcttctgAAGATGATGAGCCTTCTCCCACCAGGCAGCGAGTACGAAGGTTTGAGAGCccttcttcttcatcctccaAAGACAAGCAGCCTTCTACTCCAAGGCGGAAGCAAGCATGGAGGGGTGAGAGCCCTTCATCGTCATCTTCTGAAGATGACCAGCATTGTACCACCAGGCTGCGAGTACGAAGGTTTGAGAGCCCTTCCTTTTTATCCTCTGAAGGCAAGCAGCCTACTACTCGGAAGCGGCAGCAAGCATGGAGGGGTGAGAGCCCTTCATCGTCATCTTCTGAGGATGACCAGCGTTCTACCTTAAGGCTGCAAGTACGAAGGGATGTGAGCTCTCTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGAAGAgagctctttgtcttcctcttctgAAGAGGATGAGCCTTCTACCACCAGGCAGCGAGTACGAAGGTTTGAGAGCCCGTCCTCTTCATCCTCCGAAGACAAGCACCCTACTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGCTCTTCGTCGTCATCTTCTGAAGATGACCAGCGTTGTACCACCAGGCTGCGAGTACGAAGGGATGTGAGCTCTTTGTTCTTCGTAGGCACAAACATGAAGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACACGCCCTCTACCACCAGTGCAAGAAAGGAGACGGAGATCATtgaaagagaaaagcagcatttggaggaggagggtttaaaaagagaaagagagaggtgtgaaaagatgaagagaaagaaccaggagaaggagaggaaaatgTTTAGTCCGCGTTCAAGAATGTACATTTGGTGGCTCAGTTGCAAGATAGACAACATTGCCAGGGACATCCAATCGACCTTTGTGGATGAGCGCTACCTCCTGCGTCATGATCCCCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGCTTGACCGAAGGAGGGAGCTGGTCGTGTACAAACGCAGACAAGAATTTAAGGTGGAGAGGGAAGTGAGGAAGCAAAGACTGAAGGTAGAGAGGAAGGAAATAAATGCGAAGAAGATGGAGAATATCTCTGAGTTATGGAGCAACTCAGAATACCCAGCTCTGTTAAATTTTCTCTACGGACCAATGCCAATCAggtcacatatatatataaattaagaTAAAAGTAGAGCAATCAGAAAAATGGCACCAAATAGAGAGAGGTAATTGAGGGAGACGGCAAACATTTCAGATTTGACAAAATAGaagtaaagaaaagtaaaatatttttttaaacattagcaACCACCATCAAATATCCTTGTAACCACATGATAACACCCTAGATGTTGGCTTTAATTTAGTTATACAGTCAAAGAGCATTGTGCCAATAACAGTGTCCTAACTTAGCGCCACCTGACCCAATTTAATTCATCCTAACCTAGGCTAATTTAACCAAGGTTAGCCCAACACCTATCCTAATTTAGCTTTGGTTAGGCTCTGGCAGAGaccttagggttagggttagaccctaaagacagtagaaagaagaaagtaaggcaagaataggttgaaaatagtaataaaaacttataaaaaaaaacagtagaaagaaggaaggcaacactagggcgacaaaagtgaaaaattcaAATAGCCTAAGTGACAAACTTTGTAAATTAGCAgaataaaactttgaaaaaaagagacaaaaactttgaagaagggctcccggttagctcagttggtagagcgggcgca
>XM_039776703.1
TAAAGGCTGACATACCAGTTATCTAGATTTTCTTGTTCTCTAAAACATAATTGTATATCATTCTTCATTTTCAGAAGGGTTGATTGCTGTAAACTGGAGGATAAGAAGTTAACAGTTTCACAAACGCCAGTATACAACGAAAAATCATTGAGAAAATGTTTAGCTCCATTTTTGGACAAAACTTCTTTACAAGACATCGGTCTTCAGGAGATATGGACTCTTCTTCGAAGAAGTCCAAACGAAGGCGTGAGAGACCTTCGTCTCCTGAAGACCTCAACCCTCCCACCATCTTGAGGGAGCACGGACGAAGGGGTGAGAGACCTTCGTCTAGTGGAGGCACCAACCCTTCTACCATCATGAAGGGGCACAGGGAAAGGGGTGAGGGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTATCACCAGGCAGCAAGAACGAAGGGATGTGTACTCTTTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGGCGAgagctctttgtcttcctcttctgAAGATGATGAGCCTTCTCCCACCAGGCAGCGAGTACGAAGGTTTGAGAGCccttcttcttcatcctccaAAGACAAGCAGCCTTCTACTCCAAGGCGGAAGCAAGCATGGAGGGGTGAGAGCCCTTCATCGTCATCTTCTGAAGATGACCAGCATTGTACCACCAGGCTGCGAGTACGAAGGTTTGAGAGCCCTTCCTTTTTATCCTCTGAAGGCAAGCAGCCTACTACTCGGAAGCGGCAGCAAGCATGGAGGGGTGAGAGCCCTTCATCGTCATCTTCTGAGGATGACCAGCGTTCTACCTTAAGGCTGCAAGTACGAAGGGATGTGAGCTCTCTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGAAGAgagctctttgtcttcctcttctgAAGAGGATGAGCCTTCTACCACCAGGCAGCGAGTACGAAGGTTTGAGAGCCCGTCCTCTTCATCCTCCGAAGACAAGCACCCTACTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGCTCTTCGTCGTCATCTTCTGAAGATGACCAGCGTTGTACCACCAGGCTGCGAGTACGAAGGGATGTGAGCTCTTTGTTCTTCGTAGGCACAAACATGAAGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACACGCCCTCTACCACCAGTGCAAGAAAGGAGACGGAGATCATtgaaagagaaaagcagcatttggaggaggagggtttaaaaagagaaagagagaggtgtgaaaagatgaagagaaagaaccaggagaaggagaggaaaatgTTTAGTCCGCGTTCAAGAATGTACATTTGGTGGCTCAGTTGCAAGATAGACAACATTGCCAGGGACATCCAATCGACCTTTGTGGATGAGCGCTACCTCCTGCGTCATGATCCCCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGCTTGACCGAAGGAGGGAGCTGGTCGTGTACAAACGCAGACAAGAATTTAAGGTGGAGAGGGAAGTGAGGAAGCAAAGACTGAAGGTAGAGAGGAAGGAAATAAATGCGAAGAAGATGGAGAATATCTCTGAGTTATGGAGCAACTCAGAATACCCAGCTCTGTTAAATTTTCTCTACGGACCAATGCCAATCAggtcacatatatatataaattaagaTAAAAGTAGAGCAATCAGAAAAATGGCACCAAATAGAGAGAGGTAATTGAGGGAGACGGCAAACATTTCAGATTTGACAAAATAGaagtaaagaaaagtaaaatatttttttaaacattagcaACCACCATCAAATATCCTTGTAACCACATGATAACACCCTAGATGTTGGCTTTAATTTAGTTATACAGTCAAAGAGCATTGTGCCAATAACAGTGTCCTAACTTAGCGCCACCTGACCCAATTTAATTCATCCTAACCTAGGCTAATTTAACCAAGGTTAGCCCAACACCTATCCTAATTTAGCTTTGGTTAGGCTCTGGCAGAGaccttagggttagggttagaccctaaagacagtagaaagaagaaagtaaggcaagaataggttgaaaatagtaataaaaacttataaaaaaaaacagtagaaagaaggaaggcaacactagggcgacaaaagtgaaaaattcaAATAGCCTAAGTGACAAACTTTGTAAATTAGCAgaataaaactttgaaaaaaagagacaaaaactttgaagaagggctcccggttagctcagttggtagagcgggcgca

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776701.1 False 2480 mRNA 0.46 3 8775329 8779122
XM_039776702.1 True 2809 mRNA 0.45 3 8773981 8779122
XM_039776703.1 False 2309 mRNA 0.45 3 8773824 8779122

Neighbor

gene id symbol gene type direction distance location
LOC120543844 NA coding upstream 1713 8746864 ~ 8772111 (+)
trnay-gua_52 NA coding upstream 22711 8751028 ~ 8751113 (+)
ap2b1 ap2b1,LOC103360248 coding upstream 27867 8721039 ~ 8745957 (+)
mks1 mks1 coding upstream 54585 8711261 ~ 8719239 (+)
pou2f3 pou2f3 coding upstream 205249 8545217 ~ 8568575 (+)
LOC120544310 NA coding downstream 7633 8786755 ~ 8788439 (+)
styxl1 styxl1 coding downstream 25670 8804792 ~ 8814293 (+)
tmem120a LOC104921110,LOC103360253 coding downstream 36581 8815703 ~ 8824512 (+)
mcama NA coding downstream 77991 8857113 ~ 8911648 (+)
lrwd1 LOC107098205,LOC104945841 coding downstream 169293 8948415 ~ 8962917 (+)
G164163 NA non-coding upstream 74851 8698232 ~ 8698973 (+)
G164162 NA non-coding upstream 76946 8696445 ~ 8696878 (+)
G164136 NA non-coding upstream 136779 8636831 ~ 8637045 (+)
G164135 NA non-coding upstream 139516 8634060 ~ 8634308 (+)
G164115 NA non-coding upstream 178403 8595130 ~ 8595421 (+)
G164208 NA non-coding downstream 24762 8803884 ~ 8804190 (+)
LOC120544514 NA non-coding downstream 160691 8939813 ~ 8944602 (+)
G164293 NA non-coding downstream 229602 9008724 ~ 9183840 (+)
G164309 NA non-coding downstream 301367 9080489 ~ 9178209 (+)
G164334 zbtb16 non-coding downstream 453568 9232690 ~ 9233949 (+)
G164156 NA other upstream 91770 8680133 ~ 8682054 (+)
LOC120544397 LOC101484903,LOC104947545,LOC103360243 other upstream 142963 8628410 ~ 8630861 (+)
kcnj6 kcnj9,kcnj6 other upstream 411381 8353458 ~ 8362443 (+)
LOC120575583 LOC101066275 other upstream 478544 8292709 ~ 8295280 (+)
nsd1b nsd1 other upstream 518285 8212479 ~ 8255539 (+)
bckdk bckdk,LOC102785460 other downstream 186238 8965360 ~ 8987592 (+)
G164466 NA other downstream 1429049 10208171 ~ 10208658 (+)
G164531 NA other downstream 1781521 10560643 ~ 10562266 (+)
LOC120544459 cul5 other downstream 1793243 10572365 ~ 10589296 (+)
LOC120543733 myo7a,LOC101463922,LOC102291063 other downstream 1870875 10649997 ~ 10696751 (+)

Expression


Co-expression Network