LOC120543676


Basic Information

Item Value
gene id LOC120543676
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 3597711 ~ 3599732 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776833.1
tgtgtactatGGGCATTGCAACACACCCAGTATCTCTCTCAAACTGCTCCTCCTCCAGGAATGAAACAAGACTTGATAACTCCTCCCACACAGTTTCACATCTCAGGAAGAGAGACTCAGACAGTCGTCGTCACTGAGtgagaggtgaaatggcgcagaaaggagttcagctggaccgggaaaccttctcttgttccatctgtctggatctactgaaggatccggtgactactccctgtggacacaactactgcatgaactgtattaaaagccactggGATGGAGAGCATTGTAAGTACATCTACAGCTGTCCTCAGTGCAGGAAGACATTCACATCGAGGCCTGACCTGCTGAAAAACAACTTGTTagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcacggggagaaaactcaaagcacacaagtcctgtcttgtctgtctggctGCTTTCTGTGAGAAACACCTTCAGCCTCATTATGAATCAGCTCCattaaagaaacacaagctggtggagccgtccaagaagctccaggagaacatctgctctcgtcatgatgaggtgatgaagattttctgtcgtactgatcagcagcttatctgttCTCTCTGCTTAATGGAggaacataaaggccacgacacagtctcagctgcagcagagagagctgagaggcagagagagctcgaggggagtcgacagaccatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcgCAGGCCATCAATCTCTCTgctgataaagcagtggaggacagcgagaagatcttcactgagctgatccgtctgctgaagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacacacagaggatcacagcCAGTTTCTACAGaactacccctcactgtcaccactcagccaatcaacatccagcatccataactgtcctctgagctgctttgaggacgtgacagcggccgtgtcagaagtcagagataaactacaggacgtcctgagagagaagtggacaaacgtctcactgacagggactgaagtggacgttttactgctacaaccagagcccaagaccagagctggattcttaaaatattcacgtgaaatcacactggatccaaacacagcacacacacagctgttattatctgaggggaacaggaaagcaacaGTAATGAGACAACAACAGtcttattctagtcacccagaAAGATTCACTGGCTGGTggcaggtcctgagtagagagggtctgactggacgttgttactgggaggtggagaggagaggggaaggAGGAGTTAAtgtagcagtcgcatacaagaaTGTCAGCAGAGCAGGGGGGTCGGATGAATGTAGATTTGGACGAAATGACAAATCTTGGATGTTAGATTGTTACAACAAcagttatatattttattacaaCAATGTCCGAACTCCCGTCTCAGGTcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccggTCTATGCTGGACTAAGGTTTTATTGGTATTCTGGATACTCTGCTGAGATGTATAAAATGAGATATGCTGTACGTCAGTTGTATGGTTGGTCTGCATTCTATGCTGAGTTgtctgctgagttgtgtaaattgaaatagacagaagtcatttaagggttaaattctgtgttttaactcttcaacatatttagtctccatgtttgttACTGAGAGCTGATTGTTGTGACATTCtatttttttgacgttttttgtcagtgttttagAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776833.1 True 2022 mRNA 0.47 1 3597711 3599732

Neighbor

gene id symbol gene type direction distance location
LOC120543677 NA coding downstream 5589 3590311 ~ 3592122 (-)
trnaa-agc_20 NA coding downstream 153793 3443846 ~ 3443918 (-)
trnav-aac_4 NA coding downstream 165133 3432506 ~ 3432578 (-)
trnai-aau_27 NA coding downstream 173026 3424613 ~ 3424685 (-)
trnav-cac_1 NA coding downstream 181273 3416366 ~ 3416438 (-)
LOC120543685 LOC106675582 coding upstream 3712 3603444 ~ 3604114 (-)
LOC120543675 LOC100703014,LOC103354664,LOC102796844,LOC102305065,LOC101476254 coding upstream 25998 3625730 ~ 3639477 (-)
LOC120543681 NA coding upstream 64097 3663829 ~ 3664776 (-)
LOC120543683 NA coding upstream 262037 3861769 ~ 3867234 (-)
LOC120543678 NA coding upstream 269026 3868758 ~ 3885873 (-)
G163032 NA non-coding downstream 25458 3572005 ~ 3572253 (-)
G163029 NA non-coding downstream 29058 3568140 ~ 3568653 (-)
trnav-uac_20 NA non-coding downstream 56688 3540951 ~ 3541023 (-)
trnas-uga_24 NA non-coding downstream 59245 3538385 ~ 3538466 (-)
G163017 NA non-coding downstream 71433 3525526 ~ 3526278 (-)
G163055 NA non-coding upstream 60230 3659962 ~ 3660294 (-)
G163057 NA non-coding upstream 93217 3692949 ~ 3693160 (-)
G163072 NA non-coding upstream 185030 3784762 ~ 3786728 (-)
G163090 NA non-coding upstream 224738 3824470 ~ 3856548 (-)
G163267 NA non-coding upstream 293781 3893513 ~ 3893888 (-)
LOC120544249 alg8 other downstream 364429 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other downstream 399463 3185970 ~ 3198248 (-)
LOC120543772 NA other downstream 502237 3037923 ~ 3095474 (-)
G162910 NA other downstream 768117 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 946308 2342150 ~ 2651403 (-)
G163259 NA other upstream 270593 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 548131 4147863 ~ 4157624 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other upstream 682041 4281773 ~ 4821872 (-)
G163334 NA other upstream 702834 4302566 ~ 4304048 (-)
G163315 NA other upstream 735111 4334843 ~ 4820499 (-)

Expression


Co-expression Network