Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120543685 |
| gene name | LOC106675582 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053127.1 |
| NCBI id | CM020924.1 |
| chromosome length | 37730433 |
| location | 3603444 ~ 3604114 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| tripartite motif-containing protein 16-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039776843.1 | True | 671 | mRNA | 0.47 | 1 | 3603444 | 3604114 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120543676 | NA | coding | downstream | 3712 | 3597711 ~ 3599732 (-) |
| LOC120543677 | NA | coding | downstream | 11322 | 3590311 ~ 3592122 (-) |
| trnaa-agc_20 | NA | coding | downstream | 159526 | 3443846 ~ 3443918 (-) |
| trnav-aac_4 | NA | coding | downstream | 170866 | 3432506 ~ 3432578 (-) |
| trnai-aau_27 | NA | coding | downstream | 178759 | 3424613 ~ 3424685 (-) |
| LOC120543675 | LOC100703014,LOC103354664,LOC102796844,LOC102305065,LOC101476254 | coding | upstream | 21616 | 3625730 ~ 3639477 (-) |
| LOC120543681 | NA | coding | upstream | 59715 | 3663829 ~ 3664776 (-) |
| LOC120543683 | NA | coding | upstream | 257655 | 3861769 ~ 3867234 (-) |
| LOC120543678 | NA | coding | upstream | 264644 | 3868758 ~ 3885873 (-) |
| LOC120543692 | NA | coding | upstream | 508755 | 4112869 ~ 4124813 (-) |
| G163032 | NA | non-coding | downstream | 31191 | 3572005 ~ 3572253 (-) |
| G163029 | NA | non-coding | downstream | 34791 | 3568140 ~ 3568653 (-) |
| trnav-uac_20 | NA | non-coding | downstream | 62421 | 3540951 ~ 3541023 (-) |
| trnas-uga_24 | NA | non-coding | downstream | 64978 | 3538385 ~ 3538466 (-) |
| G163017 | NA | non-coding | downstream | 77166 | 3525526 ~ 3526278 (-) |
| G163055 | NA | non-coding | upstream | 55848 | 3659962 ~ 3660294 (-) |
| G163057 | NA | non-coding | upstream | 88835 | 3692949 ~ 3693160 (-) |
| G163072 | NA | non-coding | upstream | 180648 | 3784762 ~ 3786728 (-) |
| G163090 | NA | non-coding | upstream | 220356 | 3824470 ~ 3856548 (-) |
| G163267 | NA | non-coding | upstream | 289399 | 3893513 ~ 3893888 (-) |
| LOC120544249 | alg8 | other | downstream | 370162 | 3178767 ~ 3233282 (-) |
| LOC120544311 | LOC101470105,LOC107380983,LOC102214284 | other | downstream | 405196 | 3185970 ~ 3198248 (-) |
| LOC120543772 | NA | other | downstream | 507970 | 3037923 ~ 3095474 (-) |
| G162910 | NA | other | downstream | 773850 | 2827089 ~ 2829594 (-) |
| LOC120543939 | NA | other | downstream | 952041 | 2342150 ~ 2651403 (-) |
| G163259 | NA | other | upstream | 266211 | 3870325 ~ 3874115 (-) |
| rnasekb | rnasek,LOC107554319,LOC101475670 | other | upstream | 543749 | 4147863 ~ 4157624 (-) |
| LOC120544555 | siah2,LOC101471392,LOC102786130 | other | upstream | 677659 | 4281773 ~ 4821872 (-) |
| G163334 | NA | other | upstream | 698452 | 4302566 ~ 4304048 (-) |
| G163315 | NA | other | upstream | 730729 | 4334843 ~ 4820499 (-) |
