LOC120543735 (LOC104919183,LOC103357773)


Basic Information

Item Value
gene id LOC120543735
gene name LOC104919183,LOC103357773
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 10697026 ~ 10716079 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776947.1
GTACTTCTTGAAGACGAATCCTGTAGCTTCATGGAACCCGTGTAGGTAACTGTGGTGAGCTTGACATCCTCATCATCCGAGGCTACTTTCTCTGCACCGGGAAACCGAGGAAGAACAGCGCATTGCGTCTTCTCTGGAGGATTACTGGAGGATTgacgctgtgtgtgtgagccatGGCGTCCACGTTATCCCAGAAGCAGTTCGGCCATCTGCGTGGTCTTCGAGCTAAAGTGCTGCGGCGCTACGAGCACCAGCCTTTAGTGTTATGTCTGTCTGGTCTGTACGGCTGCCAGTGGAGACGCTATGAAAAGGGCTCCACTCAGCCGGGAGACTGCTGCTGCAACAAGGTGGAAGCTGTGAGCTTTGCTCTGCTTGTGGCGGCTTTCTGCGTAACGCTGGTGTTTCTCTACTTCTGGGGACAAGCAAAGAACGACTACAATGACTTTGACTGGTTTAACTTTGGGAAGCTGGGCTTCTGGTTTCCTTGGTCTGTGGTGCTGCTGGTCATCGCTGCAGGCTTCTTCACCTACATCACGATTCTCATGctgctggctgtgtgtttgttgtcAGAAGGCCAGAAGCTTTATTTACACTGGAGTCACAAGATTGGAATCCTGGTGAGTCTGACGTTCTCCATCGTAGCCACGGCCGTCTTATTTGACCTGTGGAGGGAAGAGTTGAGGACTTTACTACTTTCCTTCCAGATAACTGCACCTTATTTACATGTTGGTGGAGTCTTACTGGTGACAGCGCTGGCTTGGCCGATAGCTTTGCATTTCTTTCGCATGAACAGCAGAGTAAGGCGGGGCCTGATCATGGGGGTGTACCTGTCCATCCTGTCTGCCCTCTACCTGGTGCCCCTCGGTTTGTATTCTCCTTGTATCAAAGAGGACGGGACCCTTGGCCCCGCACCGGCCCTCATTGGCCACAGAGGAGCACCCATGCTCGCTCCAGAAAACACACTGATGTCATTTGAGAAAGCCGTTGAAGCAGGAAGTGAAGGTCTGGAGACGGATGTCACGATCAGCGTTGATGGGGTGCCTTTCCTGATGCATGACCACACCCTGCAACGGACCACCAACGTCCACCAGGTTTTCCCCAACCGGACTGACACCCCGGCTGCCATGTTCACCTGGGCCGAGCTGGAGAGCCTGAACGCAGGGGCCTGGTTCCTCTCTCACAATCCGTTTGGTACAGCTGGCTTTCTGGGAGCAGAGGAGCTACTGCAGGCAGGAAAGCAGTGTGTTTGCAGCCTGCAAGCCTTCCTCCAGCTGGCAGCTCAGAGAGACAAACTGGTGATCTTTGACCTCTACCGTCCACCCAGTGGTCACCCATACAGAGACTCCTGGATCCAACGCACGCTGGATGTTATCGAGAACGAGTCCTCCATTCACTCCTCACAGgtgCTGTGGCTGCCGTCAGATCAGCGGGCCTTTGTCCAAAGTAATCATCCCGAGCTCCAGCAGACGTCAGGCAGTCGGCTCCCTCTAGAGGAGCTCCAGAACAACCACATCGTCAAACTCAACCTGCACTACAGCTCCATGTCCACTGAGCtcaccagGGAGTCCGCTGCAGTGAACATCACCACCAACCTGTACGTGATCAGCCGGCCGTGGCTCTTCTCTCTGGCCTGGTGTACTGGAGTCCATTCGGTCACCACCGATGCTCCCCAGCTCCTCAGCACCATGCGCTCCCCTCTCTTCCTCATGAGTCCAGACGAGTATAACCTGATGTGGATTCTCACTGATCTGATGTCGCTCGTGCTGATCACCATCATCTTCATCTTCCACTGGTGGCGAGAGCGAGGACTGGCTTTCTGCTCGGGCAGCAAAATCACACTGGATAATGGCACTTATAGCAAGTTCAAAACAGAAATGAGTGATATATGGTCAGTCTCCAGCAGCAACTCCCAAGCAGAGAAGATGCCCAACCTAGCAACCGTCACTGAGCACTAACATCTGCCTCTGAGAGGCATACTTGGCATCAATaattaacacatacagtatgtttaatttgtacaaaaactgtgtaaaaatgacaaatggTGGTTTTACAGACCTGATACTTTATAATAAATGTTGTATTTCCATATTTACGACAAAGAACACTGTCCTTTTTTGCCTTATGTATACTATATACATTAATGAATATAAAACTGTGAATAAAAATATTCAGTAGATACTTA
>XM_039776948.1
CAACAGAGCTGGAAGGTGGACGCCGCTTCGAGGAGGTAGACCCGATGGACTCCGGGGGAAAGACGCGCTGCTGTCCGCCGGACAGCCTCGCTGAGAAGCACCGCAGCTGCCAACACCGCCAATGAAACGTACAGGATTgacgctgtgtgtgtgagccatGGCGTCCACGTTATCCCAGAAGCAGTTCGGCCATCTGCGTGGTCTTCGAGCTAAAGTGCTGCGGCGCTACGAGCACCAGCCTTTAGTGTTATGTCTGTCTGGTCTGTACGGCTGCCAGTGGAGACGCTATGAAAAGGGCTCCACTCAGCCGGGAGACTGCTGCTGCAACAAGGTGGAAGCTGTGAGCTTTGCTCTGCTTGTGGCGGCTTTCTGCGTAACGCTGGTGTTTCTCTACTTCTGGGGACAAGCAAAGAACGACTACAATGACTTTGACTGGTTTAACTTTGGGAAGCTGGGCTTCTGGTTTCCTTGGTCTGTGGTGCTGCTGGTCATCGCTGCAGGCTTCTTCACCTACATCACGATTCTCATGctgctggctgtgtgtttgttgtcAGAAGGCCAGAAGCTTTATTTACACTGGAGTCACAAGATTGGAATCCTGGTGAGTCTGACGTTCTCCATCGTAGCCACGGCCGTCTTATTTGACCTGTGGAGGGAAGAGTTGAGGACTTTACTACTTTCCTTCCAGATAACTGCACCTTATTTACATGTTGGTGGAGTCTTACTGGTGACAGCGCTGGCTTGGCCGATAGCTTTGCATTTCTTTCGCATGAACAGCAGAGTAAGGCGGGGCCTGATCATGGGGGTGTACCTGTCCATCCTGTCTGCCCTCTACCTGGTGCCCCTCGGTTTGTATTCTCCTTGTATCAAAGAGGACGGGACCCTTGGCCCCGCACCGGCCCTCATTGGCCACAGAGGAGCACCCATGCTCGCTCCAGAAAACACACTGATGTCATTTGAGAAAGCCGTTGAAGCAGGAAGTGAAGGTCTGGAGACGGATGTCACGATCAGCGTTGATGGGGTGCCTTTCCTGATGCATGACCACACCCTGCAACGGACCACCAACGTCCACCAGGTTTTCCCCAACCGGACTGACACCCCGGCTGCCATGTTCACCTGGGCCGAGCTGGAGAGCCTGAACGCAGGGGCCTGGTTCCTCTCTCACAATCCGTTTGGTACAGCTGGCTTTCTGGGAGCAGAGGAGCTACTGCAGGCAGGAAAGCAGTGTGTTTGCAGCCTGCAAGCCTTCCTCCAGCTGGCAGCTCAGAGAGACAAACTGGTGATCTTTGACCTCTACCGTCCACCCAGTGGTCACCCATACAGAGACTCCTGGATCCAACGCACGCTGGATGTTATCGAGAACGAGTCCTCCATTCACTCCTCACAGgtgCTGTGGCTGCCGTCAGATCAGCGGGCCTTTGTCCAAAGTAATCATCCCGAGCTCCAGCAGACGTCAGGCAGTCGGCTCCCTCTAGAGGAGCTCCAGAACAACCACATCGTCAAACTCAACCTGCACTACAGCTCCATGTCCACTGAGCtcaccagGGAGTCCGCTGCAGTGAACATCACCACCAACCTGTACGTGATCAGCCGGCCGTGGCTCTTCTCTCTGGCCTGGTGTACTGGAGTCCATTCGGTCACCACCGATGCTCCCCAGCTCCTCAGCACCATGCGCTCCCCTCTCTTCCTCATGAGTCCAGACGAGTATAACCTGATGTGGATTCTCACTGATCTGATGTCGCTCGTGCTGATCACCATCATCTTCATCTTCCACTGGTGGCGAGAGCGAGGACTGGCTTTCTGCTCGGGCAGCAAAATCACACTGGATAATGGCACTTATAGCAAGTTCAAAACAGAAATGAGTGATATATGGTCAGTCTCCAGCAGCAACTCCCAAGCAGAGAAGATGCCCAACCTAGCAACCGTCACTGAGCACTAACATCTGCCTCTGAGAGGCATACTTGGCATCAATaattaacacatacagtatgtttaatttgtacaaaaactgtgtaaaaatgacaaatggTGGTTTTACAGACCTGATACTTTATAATAAATGTTGTATTTCCATATTTACGACAAAGAACACTGTCCTTTTTTGCCTTATGTATACTATATACATTAATGAATATAAAACTGTGAATAAAAATATTCAGTAGATACTTA

Function

NR:

description
PREDICTED: glycerophosphodiester phosphodiesterase domain-containing protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776947.1 True 2185 mRNA 0.51 16 10697026 10712093
XM_039776948.1 False 2169 mRNA 0.52 16 10697026 10716079

Neighbor

gene id symbol gene type direction distance location
ompb omp,LOC104919181,LOC103395359 coding downstream 77522 10618757 ~ 10619504 (-)
LOC120544706 slc35f2 coding downstream 128677 10560040 ~ 10568349 (-)
LOC120544314 NA coding downstream 183305 10512542 ~ 10513721 (-)
LOC120543908 LOC103363285,LOC103395367,LOC100690133 coding downstream 251321 10327909 ~ 10445705 (-)
LOC120575563 NA coding downstream 484756 10206291 ~ 10212270 (-)
rsf1b.1 LOC106962404,LOC103145544,LOC103131284 coding upstream 9260 10725339 ~ 10745340 (-)
LOC120543827 LOC103357770 coding upstream 33373 10749452 ~ 10778550 (-)
vps37d vps37d,LOC103357766,LOC100712407,LOC108243620,LOC101486403,LOC102312367 coding upstream 99424 10815503 ~ 10839874 (-)
emsy emsy coding upstream 225512 10941591 ~ 10961644 (-)
tlcd5b LOC102308441,LOC101483771,LOC102197541,LOC100707923,LOC103374539,LOC102795433 coding upstream 290918 11006997 ~ 11011776 (-)
G164605 LOC105011052,LOC106603713,LOC108248158 non-coding downstream 37466 10657816 ~ 10659560 (-)
G164564 NA non-coding downstream 51207 10641572 ~ 10645819 (-)
G164563 NA non-coding downstream 61788 10635016 ~ 10635238 (-)
G164562 NA non-coding downstream 63224 10633602 ~ 10633802 (-)
G164520 NA non-coding downstream 215695 10481108 ~ 10481331 (-)
G164616 NA non-coding upstream 31272 10747351 ~ 10747848 (-)
G164620 NA non-coding upstream 92555 10808634 ~ 10815239 (-)
G164631 NA non-coding upstream 125012 10841091 ~ 10841305 (-)
G164633 NA non-coding upstream 127742 10843821 ~ 10844808 (-)
G164640 NA non-coding upstream 129485 10845564 ~ 10845897 (-)
elmod1 elmod1 other downstream 139750 10542218 ~ 10557276 (-)
LOC120543909 NA other downstream 207862 10463211 ~ 10489164 (-)
plekhb1 LOC107387206,LOC100711952 other downstream 569419 10109156 ~ 10127607 (-)
G164179 NA other downstream 2057865 8637714 ~ 8639161 (-)
trim37 trim37,LOC102780947 other downstream 2153523 8512174 ~ 8543503 (-)
G164728 NA other upstream 307962 11024041 ~ 11025991 (-)
G164798 NA other upstream 1131526 11847605 ~ 11850970 (-)
pof1b pof1b other upstream 1545596 12261675 ~ 12293365 (-)
fam53c LOC101064484,LOC106511557,LOC103354649,LOC107090569,LOC102206536,LOC102303322 other upstream 1707095 12423174 ~ 12432292 (-)
sec24a NA other upstream 2114657 12830736 ~ 12864464 (-)

Expression


Co-expression Network