LOC120543747 (LOC104919174,LOC103354811)


Basic Information

Item Value
gene id LOC120543747
gene name LOC104919174,LOC103354811
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 10274665 ~ 10280871 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776967.1
TTAAGCAGCGTGAATGCAGCGCAGCGCTTCCCATTGACCAGGCATCCCTTCCGGTAGATGAGGTCAACTTTTCCCTAGATCCGCCATTTCAGTCCCGGAGTTTCTTGTTGCACATTAGTTTTGCATTtaatagtttgtcattttaaCGTTTAACCTGTTGATTGTTAGGTTTTGTGGTGCAACAGAAGTTCCGTCAACTTAAACGTATTAATAGTACTAGTGGAAGTTGCAAAAATTGGGGtattatacagttttttttcagggGAGGCGTTAGTCTACCAAAGTTTTGTATGAGTTGCGGATAGGGAGAGGCGAAGGGGAAAGGCCTCAAGCCTCGGACAGGATTTCACAGCCATGGCCGGTAATTTTGATGCCGAAGACCGTGCTAGCTGGTACTGGGGAAAGCTAAGCCGTCAGGAGGCAGTTTCTCTTTTACAGGGACAGAGACATGGCGTTTTCTTGGTGAGAGACTCAATTACCAGCCCTGGTGACTACGTGCTGTCCGTATCAGAGAACTCCAAAGTGTCCCATTATATAATCAACAGCATCAGTAACAACCGGCAATCTGGCTCAGGTATTGCTCCTCCTCGTTTTCGGATAGGGGATCAGGAGTTTGAAGCGCTGCCGGCTCTGTTGGAGTTTTATAAGATCCACTACCTGGACACGACCACACTCATAGAGCCCGTAAACAAGGCTAACAACACAGGATTCATCAGCTCCCCCTCTGTTGGCGTCCCGCCGCAGCCCGAGGAGGCGGAGTTTGTACGGGCGCTATTTGACTTCCCTGGCAACGATGAGGAGGACCTCCCCTTCCGCAAAGGTGATATCCTGCGTGTGCTGGAAAAGCCCGAGGAGCAGTGGTGGAACGCTGCTAACCAGGAGGGCCGAGCCGGGATGATCCCTGTGCCCTACGTGGAGAAGTACCGACCTGCCTCGCCCACCGCTGCCGGCCTGGGTCCCCCTGTTGTGGGGACTGGACAGGGGGGGCAAGTTGGAGGGCTAGGGGGCAGCACAGACGGAACAGGGAGCCCTCAGGCAAATCCTCTGGGGGACCCAGGCCAGTACGCTCAGCCTGTGGCCAATGCCCAGCTCCCTAACTTACAGAATGGGCCCGTCTATGCTCGAGCCATTCAGAAGAGGGTGCCCAACGCCTACGACAAGACGGCACTCGCTCTGGAGGTGGGAGACATGGTACAAGTGACCAAGATCAACGTGAACGGCCAATGGGAGGGTGAGTGCAAGGGCAAACGAGGCCACTTTCCCTTCACCCACGTTCGACTGTTGGAACAGCACCATCCCGATGACGAGAGCTGAGAAACGCACGCGCTCCCATCACCTCGAcagtgtccagcacagccctTCCCTTTCGGTCATTTTGTCATGctcagaaagaaaaaagatttaTACAAGCACACAGTATATGAACCTATGACCTCAACCGGTCAGGCACTACTGGCCCTGCCAACACAAGACGTGTTGGGTGATATTGCCTACTGTCATTTTGAAAAGTTTACACTTAGGTCAGACTGATATCGGTTCCCCTAAATTAGcttctgtcttctttctttttttttaaagtcagcaTTACACACTGCCATTGTTGGCTCCCTCTTAATTACTTTTCCGAAACTTGCAATTAAATATGTCTTGTATTCAGaaagaattacatttttacagaATTGCAGCA

Function

NR:

description
PREDICTED: adapter molecule crk isoform X1

GO: NA

KEGG:

id description
K04438 CRK, CRKII; C-crk adapter molecule crk

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776967.1 True 1687 mRNA 0.51 3 10274665 10280871

Neighbor

gene id symbol gene type direction distance location
LOC120543746 LOC103476347 coding upstream 678 10255903 ~ 10273987 (+)
tlcd3a LOC103354813,LOC104919172,LOC100712488,LOC101468971,LOC101174853 coding upstream 20333 10220219 ~ 10254332 (+)
LOC120544214 LOC103354814 coding upstream 76151 10188536 ~ 10198514 (+)
tecta tbcel,tecta coding upstream 95893 10110445 ~ 10178772 (+)
LOC120544618 sc5d,LOC102788886 coding upstream 167298 10099871 ~ 10107367 (+)
LOC120543748 LOC103145510,LOC105929018,LOC107081867,LOC103354810,LOC100689869,LOC106936767,LOC107387197 coding downstream 5424 10286295 ~ 10299147 (+)
LOC120543654 NA coding downstream 31507 10312378 ~ 10316886 (+)
capn5b capn5,LOC106514630,LOC104919182,LOC101464883,LOC108248155,LOC103395360 coding downstream 312335 10593206 ~ 10645795 (+)
LOC120543736 LOC104919184,LOC103357772 coding downstream 434940 10715811 ~ 10718566 (+)
foxred1 foxred1 coding downstream 502184 10783055 ~ 10793842 (+)
G164462 NA non-coding upstream 74766 10199005 ~ 10199899 (+)
G164425 NA non-coding upstream 112824 10161125 ~ 10161841 (+)
G164427 NA non-coding upstream 118888 10155340 ~ 10155777 (+)
G164392 NA non-coding upstream 144498 10129500 ~ 10130167 (+)
G164391 LOC100711952,LOC107387206,LOC102778776,LOC102209318 non-coding upstream 161441 10109662 ~ 10113224 (+)
G164475 NA non-coding downstream 1249 10282120 ~ 10285258 (+)
G164493 NA non-coding downstream 193799 10474670 ~ 10475022 (+)
G164521 NA non-coding downstream 261347 10542218 ~ 10547596 (+)
G164537 NA non-coding downstream 352598 10633469 ~ 10633682 (+)
G164538 NA non-coding downstream 352937 10633808 ~ 10634030 (+)
G164466 NA other upstream 66007 10208171 ~ 10208658 (+)
bckdk bckdk,LOC102785460 other upstream 1287073 8965360 ~ 8987592 (+)
G164156 NA other upstream 1592611 8680133 ~ 8682054 (+)
LOC120544397 LOC101484903,LOC104947545,LOC103360243 other upstream 1643804 8628410 ~ 8630861 (+)
kcnj6 kcnj9,kcnj6 other upstream 1912222 8353458 ~ 8362443 (+)
G164531 NA other downstream 279772 10560643 ~ 10562266 (+)
LOC120544459 cul5 other downstream 291494 10572365 ~ 10589296 (+)
LOC120543733 myo7a,LOC101463922,LOC102291063 other downstream 369126 10649997 ~ 10696751 (+)
rabep1 rabep1 other downstream 571414 10852285 ~ 10886327 (+)
mpzl1l LOC104919192,LOC102794867,LOC102196015,LOC103357763 other downstream 608936 10889807 ~ 10909753 (+)

Expression


Co-expression Network