LOC120543770


Basic Information

Item Value
gene id LOC120543770
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 2882355 ~ 2884569 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777002.1
CTCACACAGGTTTACAAACGGCAAAGTTAAACAGTAAGCTGCCAGTGCGAGAATGAAGATCTTTGTGAGTTTTTCGCTGTGGCTGCTGCTCGGCGCCGTCTCTGCTGAAAAAAGTACCAACTATCAGCTGCCTTTTCCTCAAGACATCTACGCTGCGCTGAAACAGATAACTGCCTCGTTGGATCAACAGAAGGCAGACATGAGCTTGTTGCAAAGAGAGACTCAAGAACAAGTATCACAGCTGAAGACTGAAGTGGACAAGCTGAAGCAAGAACAGCAAGgCCGACAGGTTGCGTTCTCAGCCTCTCTGTCGGCTGGGGGCCCAGCAGTAACTTTAGGACCCTTTCCCTCGGCTCCTACCCTGGTCTTCAAACACGTTGTCACCAACATCGGAAATGCCTACAACTCAAACTCAGGTGTGTTCACTGCCCCGGTGAGAGGAGCGTACAACTTTGACTGGTCGATCGGTGCACATGCAAACAACCGCAATCCTTCAGCTGCCTGGTTGGTCAAGAACACAGAGAATGTTTTCATTGCATATGAGTCTGAGCCAGCCGGTTTTATGAGTTCTTCTAAAGGCGCTACGCTGCTGCTGGAGGTGGGAGATGTTGTGTTTGTGCGTCTGGCGGGTGACACTAGGGCGTATGACGACATAAATCACCACACCACCTTCAGTGGGTCTCTGCTGTTCACCATGTAAGACAgaaacagcagctctgtgataGTCACGCAGGTTTTGTCTTCATAGCACTTCATAGATTTTCTCTGATTTCATCTGAATCTAAATATCAATAAGTAATAATTGTCGACAGGAATCTTTTTTCCTTCAAATATAAATTGATTAATGTTTCTGATTCTCTCTTGTGTCTGTAattttaatcaaataataaaGATATATCATTGCAATTA

Function

GO: NA

KEGG:

id description
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777002.1 True 909 mRNA 0.46 4 2882355 2884569

Neighbor

gene id symbol gene type direction distance location
LOC120544248 NA coding downstream 14025 2855026 ~ 2868330 (-)
pcf11 pcf11 coding downstream 27300 2814061 ~ 2855055 (-)
LOC120543944 NA coding downstream 395236 2476851 ~ 2487119 (-)
LOC120544242 NA coding downstream 501140 2379567 ~ 2381215 (-)
ncf1 NA coding downstream 638268 2235522 ~ 2244087 (-)
LOC120543768 NA coding upstream 39913 2924482 ~ 2937752 (-)
ncbp3 LOC102780188 coding upstream 185501 3070070 ~ 3086217 (-)
LOC120575705 NA coding upstream 463051 3347620 ~ 3354553 (-)
trnad-guc_8 NA coding upstream 520618 3405187 ~ 3405258 (-)
trnav-aac_3 NA coding upstream 521461 3406030 ~ 3406102 (-)
G162906 NA non-coding downstream 17129 2824866 ~ 2865226 (-)
G162908 NA non-coding downstream 30951 2847321 ~ 2851404 (-)
G162911 NA non-coding downstream 40621 2841304 ~ 2841734 (-)
G162904 NA non-coding downstream 198251 2683596 ~ 2684104 (-)
G162903 NA non-coding downstream 200148 2681807 ~ 2682207 (-)
G162922 NA non-coding upstream 29440 2914009 ~ 2914569 (-)
LOC120543774 NA non-coding upstream 145405 3029974 ~ 3035752 (-)
G162939 NA non-coding upstream 203352 3087921 ~ 3089697 (-)
G162940 NA non-coding upstream 205703 3090272 ~ 3090937 (-)
G162938 NA non-coding upstream 216883 3101452 ~ 3534641 (-)
G162910 NA other downstream 52761 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 230952 2342150 ~ 2651403 (-)
LOC120544171 NA other downstream 990932 1887629 ~ 1891423 (-)
G162787 NA other downstream 1045853 1835969 ~ 1836502 (-)
G162399 NA other downstream 1441537 1437253 ~ 1440818 (-)
LOC120543772 NA other upstream 153354 3037923 ~ 3095474 (-)
LOC120544249 alg8 other upstream 294198 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other upstream 301401 3185970 ~ 3198248 (-)
G163259 NA other upstream 985756 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 1263294 4147863 ~ 4157624 (-)

Expression


Co-expression Network