LOC120543771


Basic Information

Item Value
gene id LOC120543771
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 2873229 ~ 2898462 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777003.1
CTTACAAGTAAAAACGAACCTTTGAGAGAACTCCAGTCATTTTGTCCACACTTTCAACATAAGATATACAACAGAATGAAGATCTCTGTGAGTTTTacgctgttgctgctgctcggCGCCGTCTCCGCTGAAGAAAGTAACGATTATCAGCTGCCTTTTCCTCAAGATATCTACATTGCGCTGGAACAGATGACCGCCTCGTTGGATCAACAGAAGGCAGACATGAGATTGTTGCAAAGAGAGACTCAAGAACAAGTATCACAGCTGAAGACTGAAGTGGACAAGCTGAAGCAACAACAGCAAGgcCGACAGGTTGCGTTCTCAGCCTCTCTGTTGGCTGGAGGCCAAGCAGGAACTTTAGGACCCTTTCCCTCGGCTCCTACCCTGGTCTTCCAACACGTTGTCACCAACATCGGAAATGCCTACGACCCAAACTCAGGTGTGTTCACTGCCCCGGTGAGAGGAGCGTACAACTTTGACTGGTCGATCGGTGCACATGCAAACAACCGCAATCCTTCAGCTGCCTGGTTGGTCAAGAACTCAGAGCATGTTTTCATTGCATACGAGCATGAGACGGCCGGTTTTATGAGTTCTTCTAAAGGCGCTACGCTGCTGCTGGAGGTGGGAGACATTGTGTTTGTGCGTCTGGCGGGTGACACTAGGGCGTATGACGACATAAATCACCACACCACCTTCAGTGGCTCTCTGCTGTTCACCATGTAAGACAGAAACAGCAGCTCTGAGATAGTCACGCAGGTTTTGTCTTCATAGCACTTCATAGATTTTCTCTGATTTCATCTGCATCTAAATATCAATAAGTAATAATTGTCGACAGGAATCTTTTTTCCTTCAAATATAAAGTGATTCATGTTTCTCATTCTCTCTTGTTTCTGTAatttta
>XM_039777004.1
ATTTCTGCATGTTGCTGTGAGTGTAAACTGACTCTACTTACAAGTAAAAACGAACCTTTGAGAGAACTCCAGTCATTTTGTCCACACTTTCAACATAAGATATACAACAGAATGAAGATCTCTGTGAGTTTTacgctgttgctgctgctcggCGCCGTCTCCGCTGAAGAAAGTAACGATTATCAGCTGCCTTTTCCTCAAGATATCTACATTGCGCTGGAACAGATGACCGCCTCGTTGGATCAACAGAAGGCAGACATGAGATTGTTGCAAAGAGAGACTCAAGAACAAGTATCACAGCTGAAGACTGAAGTGGACAAGCTGAAGCAACAACAGCAAGgcCGACAGGTTGCGTTCTCAGCCTCTCTGTCGGCTGGGGGCCCAGCAGTAACTTTAGGACCCTTTCCCTCGGCTCCTACCCTGGTCTTCGCACACGTTGTCACCAACATCGGAAATGCCTACAACCCAAACTCAGGTGTGTTCACTGCCCCGGTGAGAGGAGCGTACCACTTTGACTGGTCGATCGGTGCACATGGAAACAACCTCAATCCTTCAGCTGCCTGGTTGGTCAAGAACTCAGAGCATGTTTTCATTGCATACGAGTATGAACCAGTCGGTTTTATGAGTTCTTCTAAAGGCGCTACGCTGTTACTGGAGGTGGGAGATGTTGTGTTTGTGAGTCTGGCGGGTGACACTAGGGCGTATGACGACATAAATCACCACACCACCTTCAGTGGCTCTCTGCTGTTCACCATGTAAGACAgaaacagcagctctgtgataGTCACGCAGGTTTTGTCTTCATAGCACTTCATAGATTTAAACTGATTTCGTCTGAATCTAAATATCA
>XM_039777006.1
TCATTTCTGCATGTTGCTGTGAGTGTAAACTGACTCTACTTACAAGTAAAAACGAACCTTTGAGAGAACTCCAGTCATTTTGTCCACACTTTCAACATAAGATATACAACAGAATGAAGATCTCTGTGAGTTTTacgctgttgctgctgctcggCGCCGTCTCCGCTGAAGAAAGTAACGATTATCAGCTGCCTTTTCCTCAAGATATCTACATTGCGCTGGAACAGATGACCGCCTCGTTGGATCAACAGAAGGCAGACATGAGATTGTTGCAAAGAGAGACTCAAGAACAAGTATCACAGCTGAAGACTGAAGTGGACAAGCTGAAGCAACAACAGCAAGgcCGACAGGTTGCGTTCTCAGCCTCTCTGTCGGCTGGGGGCCCAGCAGTAACTTTAGGACCCTTTCCCTCGGCTCCTACCCTGGTCTTCGCACACGTTGTCACCAACATCGGAAATGCCTACAACCCAAACTCAGGTGTGTTCACTGCCCCGGTGAGAGGAGCGTACAACTTTCAGTGGTGGGTTGGTGCATTTGGAAACAATGGCTGGGGTTCAGGTTCTTGGTTGGTCAAGAACGCAGACCAACTTTTCATGGCATATGAGCAACAGGCGGCCGGTTTTATGAGTTCTTCTAAAGGCATGACGCTTCTGCTGGAGGTGGGAGACATCGTCTTTATTCGTCTGCAGGCTAACACTGCTGTGTTTGATGACCCAGGGCACCACAACACCTTTAGTGGGCATCTGCTGTTCCCCATGTGAGACAgaaacagcagctctgtgataGTCACGCAGGTTTTTGTTGTCTTAAACAAGTCTTGATAGCACTTCATAGGTTTTCTCTGATTTCATCTGCAtccaaataataataagtaataattgTCGACGGGaa

Function

GO:

id name namespace
GO:0031667 response to nutrient levels biological_process
GO:0009991 response to extracellular stimulus biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777003.1 True 901 mRNA 0.46 5 2873229 2898424
XM_039777004.1 False 850 mRNA 0.47 4 2896265 2898460
XM_039777006.1 False 891 mRNA 0.47 4 2887536 2898462

Neighbor

gene id symbol gene type direction distance location
LOC120544248 NA coding downstream 4899 2855026 ~ 2868330 (-)
pcf11 pcf11 coding downstream 18174 2814061 ~ 2855055 (-)
LOC120543944 NA coding downstream 386110 2476851 ~ 2487119 (-)
LOC120544242 NA coding downstream 492014 2379567 ~ 2381215 (-)
ncf1 NA coding downstream 629142 2235522 ~ 2244087 (-)
LOC120543768 NA coding upstream 26020 2924482 ~ 2937752 (-)
ncbp3 LOC102780188 coding upstream 171608 3070070 ~ 3086217 (-)
LOC120575705 NA coding upstream 449158 3347620 ~ 3354553 (-)
trnad-guc_8 NA coding upstream 506725 3405187 ~ 3405258 (-)
trnav-aac_3 NA coding upstream 507568 3406030 ~ 3406102 (-)
G162906 NA non-coding downstream 8003 2824866 ~ 2865226 (-)
G162908 NA non-coding downstream 21825 2847321 ~ 2851404 (-)
G162911 NA non-coding downstream 31495 2841304 ~ 2841734 (-)
G162904 NA non-coding downstream 189125 2683596 ~ 2684104 (-)
G162903 NA non-coding downstream 191022 2681807 ~ 2682207 (-)
G162922 NA non-coding upstream 15547 2914009 ~ 2914569 (-)
LOC120543774 NA non-coding upstream 131512 3029974 ~ 3035752 (-)
G162939 NA non-coding upstream 189459 3087921 ~ 3089697 (-)
G162940 NA non-coding upstream 191810 3090272 ~ 3090937 (-)
G162938 NA non-coding upstream 202990 3101452 ~ 3534641 (-)
G162910 NA other downstream 43635 2827089 ~ 2829594 (-)
LOC120543939 NA other downstream 221826 2342150 ~ 2651403 (-)
LOC120544171 NA other downstream 981806 1887629 ~ 1891423 (-)
G162787 NA other downstream 1036727 1835969 ~ 1836502 (-)
G162399 NA other downstream 1432411 1437253 ~ 1440818 (-)
LOC120543772 NA other upstream 139461 3037923 ~ 3095474 (-)
LOC120544249 alg8 other upstream 280305 3178767 ~ 3233282 (-)
LOC120544311 LOC101470105,LOC107380983,LOC102214284 other upstream 287508 3185970 ~ 3198248 (-)
G163259 NA other upstream 971863 3870325 ~ 3874115 (-)
rnasekb rnasek,LOC107554319,LOC101475670 other upstream 1249401 4147863 ~ 4157624 (-)

Expression


Co-expression Network