LOC120543846 (LOC103360252,LOC102202538,LOC101472723,LOC102784315)


Basic Information

Item Value
gene id LOC120543846
gene name LOC103360252,LOC102202538,LOC101472723,LOC102784315
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 8757077 ~ 8765566 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777149.1
CAACATGTACTCAGTCCCAGCAGAGTCTGAATGGACGACTTGTGTTCTCCGTCCCAGAGTCACGAATCATGCTGGTTGTCTGGGAGGAAAACAAAGCTTGAGACCCAAGATGAAGGCAGAGAAGGAGGCTCCTTCAAAAGCTAAAATTATTTCCCAAATAGTTCTGTTCATGTGTCTCGGTTCCTTCAATTCAGGTGGGGTGCTGGCAGTGAATATGACTATCCCCAACACTCTCATTAGAGGAACACTAGGGGGGGAGGCCCTGCTGTCTGTCCGTTACAATAGCTTCAGCCTCGACCTGCCGGTCATCAAGTGGCAGCTCAAGAGGGAAAAGTCTGTCACTGTTGTCCAGTCGATTGGAACTGACATCATTGGGACCCTGAGGCCCGAGTATCGTGACCGCATCCTGGTATTTGAGAATGGGACACTGCTTCTCCACAACCTCAGAATCTCTGATGACGGAACTTATGACGTGGAGATCTCAATCACAGATGATACCTTTACAGGAGAGGGCAGCATCACGCTCACTGTGGATGAGTCTATATCCAGGCCCTATATCCACATGGAGGCTTTGTCAGTCCTGGAGCTCAGCGAAAACGTCGTCCTCAACTGCTCCCACGACAATGGAACCAGGACTACATACAGGTGGTTCAAAGGTGGAAAGCCGCTGACCAATATGACGAGGTTCGTGTTGTCCCCTGACCAGAAGTTCTTGACCATCACACGAGTGTTGATGGGAGATGATGACATCTACAGCTGCGCAGTGGAGAATCCTGTGGGCAATATGACAAGCCTGCCTGTCAGACTGACTGTCTACAGAAGAAGCTCTCTCTATATTATCCTTTCCACGGGGGgcatcttcctcctcatcacCTTGGTAACAGTATGTGCCTGCTGGACGCCTTCCAAAAAGAAAAGACATCCAGCTAGAAAGCCTCTCACCCGCTTTTATGACCACGCTGATCTCTCACCAATCAATCACACAGATGATGTGCTTCCAAAAATGACAGCGCATAATGGAATAAATGCTGTAACTTCACTTTACATCCTGCAGCAAAAGGATCCCTCCATGGATGACTCCTCCAGCAACAGTATTGGATCTCCATCTTCTGAGCTTGACAACCCGCCCTGCTACACCAGTTGCCCCAACTACACTGGCTCTCTTACCCAATCTAATGGGTCCCCTGCCCGCTCCTCCCACAGCCATACCTGAACGCCCGTCAGTTTAAACTCTCCACATCGCAAGTGGAAGGTCAGACCGTCTTACTGTATCCTGACTCTGGGTGGCAACTTGCTGCACATCTGCCCGGAGTTTGGGAAATATCTCAAAACCATTTTCTGGGTTTTTAAAATAATGTCACTACTGCCTGTGATCAGTgtccaaaattaactttttgacTCACCGGCCAAGTTGGCGGGTAGATGAAAAAAATCTACCGGCCAAGCATATTTTTACCAgccaaaatattaaattgcatttctttttgtaacgtacatcacaacattttctgGTTGGGGTTGCAAGTCCTGCTGGTTTATCTTTTTCGTTTTCATCGTACTTTCTTTTGGAAGGATGTCTGATTCTTGCCAAAAATCGCCACATTCTGGCTAATTAATTAGCCCGCGGTAAATTCTagctatcagtaaacagaagtgaCCTGTTGGCTCTCGTTCCGGTGTGTGCGGGTCTTTGCATtagtgtatgttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttggcccgCCCCCGCGAAGCTCCGACATGCAgacatgttcccacatttcctttttcataaatttgtttcatagattttatccccctttctcccagtttggtagccaattacacccaacctgttatccagtagcaatggactacagatgga
>XM_039777150.1
ACAACATGTACTCAGTCCCAGCAGAGTCTGAATGGACGACTTGTGTTCTCCGTCCCAGAGTCACGAATCATGCTGGTTGTCTGGGAGGAAAACAAAGCTTGAGACCCAAGATGAAGGCAGAGAAGGAGGCTCCTTCAAAAGCTAAAATTATTTCCCAAATAGTTCTGTTCATGTGTCTCGGTTCCTTCAATTCAGGTGGGGTGCTGGCAGTGAATATGACTATCCCCAACACTCTCATTAGAGGAACACTAGGGGGGGAGGCCCTGCTGTCTGTCCGTTACAATAGCTTCAGCCTCGACCTGCCGGTCATCAAGTGGCAGCTCAAGAGGGAAAAGTCTGTCACTGTTGTCCAGTCGATTGGAACTGACATCATTGGGACCCTGAGGCCCGAGTATCGTGACCGCATCCTGGTATTTGAGAATGGGACACTGCTTCTCCACAACCTCAGAATCTCTGATGACGGAACTTATGACGTGGAGATCTCAATCACAGATGATACCTTTACAGGAGAGGGCAGCATCACGCTCACTGTGGATGAGTCTATATCCAGGCCCTATATCCACATGGAGGCTTTGTCAGTCCTGGAGCTCAGCGAAAACGTCGTCCTCAACTGCTCCCACGACAATGGAACCAGGACTACATACAGGTGGTTCAAAGGTGGAAAGCCGCTGACCAATATGACGAGGTTCGTGTTGTCCCCTGACCAGAAGTTCTTGACCATCACACGAGTGTTGATGGGAGATGATGACATCTACAGCTGCGCAGTGGAGAATCCTGTGGGCAATATGACAAGCCTGCCTGTCAGACTGACTGTCTACAGAAGAAGCTCTCTCTATATTATCCTTTCCACGGGGGgcatcttcctcctcatcacCTTGGTAACAGTATGTGCCTGCTGGACGCCTTCCAAAAAGAAAAGACATCCAGCTAGAAAGCCTCTCACCCGCTTTTATGACCACGCTGATCTCTCACCAATCAATCACACAGATGATGTGCTTCCAAAAATGACAGCGCATAATGGAATAAATGCTGTAACTTCACTTTACATCCTGCAGCAAAAGtgaactgaatatctttgagttgtggacaaaacaagacatttgaggacgtcatcttgggctttgggaaacactgactgACAATTTTCACCACTTCTGATATTttgtatagaccaaacaactggatcgagaaaataatggacagattaatcgacaataaaATTAATCGCTAGGTGCGGCCGTAAATAAACTATGCAGACTCTGACTCTTACGTAAAACTACTATGCTAAACGGTAAAGAACATGCATACTTGTCATTGTTAGCGTCCCACacagacaataaaacacaacattacAAATAGAAAAGTTAGGCACTTACAAATAGCtgcatgcccacacacacaagcagcaaCAAGCAGCCTCTGTATGATCCATCTCCTCAACTGCAGAAACTCAGGACTAATCTAGGAGCCTTTTCCACAATATAAATAGTATTTTACTACATGAACTTTGTTTTACTGGATAATTGGTAGCAGAGAAGGGATTTGGGCTGAAGTCGTCCTGTTTTGCAGGATCCCTCCATGGATGACTCCTCCAGCAACAGTATTGGATCTCCATCTTCTGAGCTTGACAACCCGCCCTGCTACACCAGTTGCCCCAACTACACTGGCTCTCTTACCCAATCTAATGGGTCCCCTGCCCGCTCCTCCCA

Function

NR:

description
PREDICTED: hepatocyte cell adhesion molecule-like

GO: NA

KEGG:

id description
K23116 HEPACAM; hepatocyte cell adhesion molecule

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777149.1 True 1894 mRNA 0.48 7 8757077 8765565
XM_039777150.1 False 1709 mRNA 0.47 7 8757771 8765566

Neighbor

gene id symbol gene type direction distance location
trnay-gua_54 NA coding downstream 4714 8752278 ~ 8752363 (-)
trnay-gua_53 NA coding downstream 5165 8751824 ~ 8751912 (-)
zw10 zw10 coding downstream 46999 8698230 ~ 8710078 (-)
LOC120543560 LOC104952473,LOC101069911,LOC105023963 coding downstream 61126 8689379 ~ 8695951 (-)
pom121 pom121c,pom121 coding downstream 67949 8677283 ~ 8689128 (-)
LOC120544511 LOC103375958 coding upstream 152916 8918482 ~ 8939789 (-)
alkbh4 alkbh4 coding upstream 176542 8942108 ~ 8947527 (-)
orai2 orai2,LOC101071969,LOC103395401,LOC107685638 coding upstream 231310 8996876 ~ 9007783 (-)
usp28 NA coding upstream 244119 9009685 ~ 9043931 (-)
zbtb16a zbtb16 coding upstream 321269 9086835 ~ 9239856 (-)
G164196 ap2b1,LOC103395083 non-coding downstream 10921 8739849 ~ 8746156 (-)
G164193 NA non-coding downstream 19574 8735379 ~ 8737503 (-)
G164188 NA non-coding downstream 32781 8721110 ~ 8724296 (-)
G164175 LOC101484903,LOC104947545,LOC103360243 non-coding downstream 126191 8627797 ~ 8630886 (-)
G164079 NA non-coding downstream 247018 8499765 ~ 8510059 (-)
G164243 NA non-coding upstream 64305 8829871 ~ 8830426 (-)
G164267 NA non-coding upstream 150069 8915635 ~ 8926325 (-)
G164278 bckdk non-coding upstream 199843 8965409 ~ 8965767 (-)
G164282 NA non-coding upstream 210113 8975679 ~ 8976225 (-)
G164283 NA non-coding upstream 213184 8978750 ~ 8979021 (-)
G164179 NA other downstream 117916 8637714 ~ 8639161 (-)
trim37 trim37,LOC102780947 other downstream 213574 8512174 ~ 8543503 (-)
smg8 smg8,LOC102779993 other downstream 291278 8451577 ~ 8465799 (-)
rabgef1 rabgef1,LOC102778478 other downstream 376502 8368495 ~ 8380575 (-)
G164022 kctd7,LOC102776841 other downstream 404572 8346828 ~ 8352505 (-)
plekhb1 LOC107387206,LOC100711952 other upstream 1343590 10109156 ~ 10127607 (-)
LOC120543909 NA other upstream 1697645 10463211 ~ 10489164 (-)
elmod1 elmod1 other upstream 1776652 10542218 ~ 10557276 (-)
G164728 NA other upstream 2258475 11024041 ~ 11025991 (-)
G164798 NA other upstream 3082039 11847605 ~ 11850970 (-)

Expression


Co-expression Network