XLOC_004884


Basic Information

Item Value
gene id XLOC_004884
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 35705133 ~ 35706948 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010977
CTTCTAGAGGAGGGGGAGGAGAGCCAGATCGTGCGGAGATTCTTTTCCGTCCTTCTCCTTCACAGTCCTTACTCTTGGATTTTAGCTCCTCATGTGTAGGAGAGTCATTCTTTTCTGCTTTTTCCTTTTGAGACTGTAGTTCCTCTTCGGACAAAATGGCACAGCTGACATCTTTGACTATGTCCTCTTCGTTCTCATCAGTAAGTACCTCTGGATTGGGCTTGTTTACAAGATCGCCTTCAAAAGTAACTTGGTCATGAGACAGACTATCTTCACTTTCTACTTGTTTGAAAGATTCCTCTTGCTTTCCATCAGTACCAAGTTCTTCAGATGCTAAAAGTTCTGCAGAGAGATCTGAAACAACACCAATATTTTCATTATCTTCAAAACTACTTTTTATGGTAGAAACGTCTTTAAGAGGTGAGAGAGACACGCTACAGATTGTGCCACACACAGACAAACTTTCATCTGTCATTGATGGAAGGTTTGAGATTGAATGATCAGACAGTTCAGGGATTTTTTCACTCTTCTTTGTAGATGGCATAAGATATTCATCTACATCTGTCTCCTTTTGTGGAGGAAGTTGTTCCTCTTTATATATAATTTCCCCTGGTCTGTCTTTCTGATCTTCAAGTTCATTGATGTCCTCTTCGCTTTCTTTATCTTTGCCAGCATCATAATCAGAAAAGTAGGCAGAATCTCTGTATGGTGTTTTATCACTCAGTGCTTTCAGCTCTCCATCACTGCTCTCAGATGCTGTCAAGGCCACTGCAGTATAAAAATCACCCTCAAGCTTCTCACATTCTGTTGTTGTAATCTCTTGGTCTTCACTGACAAAACTTGTCCCAGATGTTACCTTTCCCAAAGTATTGCTTTTAATCGGTGCCTCCAAGTAGTCAACAGGTTTGGTCATATGGTATGACAGGGTCTGCTGCTCTGGCCATGTATCCTCAATATCAGTCATTGGCAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010977 True 970 lncRNA 0.41 2 35705133 35706948

Neighbor

gene id symbol gene type direction distance location
XLOC_004883 baiap2b coding upstream 15894 35654749 ~ 35689239 (+)
XLOC_004882 baiap2b coding upstream 52082 35650321 ~ 35653051 (+)
XLOC_004881 FO681473.1 coding upstream 93319 35611698 ~ 35611814 (+)
XLOC_004879 NA coding upstream 356722 35345825 ~ 35348411 (+)
XLOC_004878 ndst2b coding upstream 365569 35203091 ~ 35339564 (+)
XLOC_004885 NA coding downstream 131340 35838288 ~ 35842371 (+)
XLOC_004886 NA coding downstream 214229 35921177 ~ 35925412 (+)
XLOC_004887 NA coding downstream 274968 35981916 ~ 35984381 (+)
XLOC_004888 NA coding downstream 338365 36045313 ~ 36049933 (+)
XLOC_004889 btbd17a coding downstream 385270 36092218 ~ 36107156 (+)
XLOC_004876 CU459210.1 non-coding upstream 597135 35106575 ~ 35107998 (+)
XLOC_004874 NA non-coding upstream 645525 35058147 ~ 35059608 (+)
XLOC_004869 CR854979.1 non-coding upstream 823238 34881777 ~ 34881895 (+)
XLOC_004891 NA non-coding downstream 567674 36274622 ~ 36277231 (+)

Expression


Co-expression Network