LOC120543932


Basic Information

Item Value
gene id LOC120543932
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 17464407 ~ 17467578 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777357.1
CTGGAGTGATAGCCTGGTTGCCATGGTGATCGTCCTGCAGCAGCATAGTAACAACCTCAGCACCGGCCACAGCTCCGTGTCGGACCCCGCCGCCGGCGGGCTGAGCCGGGCGCATCACACCGCTGCAGCCGTAGTCCTCGGGTTCATCCTGGTCCTGGGCTTCCTCGGTAACCTACTCGTGCTCCTGGTGTTCTCGCGCTTCCCCGGACTGGTGACTCCGGTGAACTTGCTGCTGATCAACATCAGCGCCAGCGACATGCTCGTCTGCATCTTCGGAACTCCCCTCAGCTTCGCGGCCAACGTGCGCGGCCGGTGGCTGACCGGCTCCTACGGGTGCCGATGGTACGGTTTCTCCAACGCGTTTTTCGgtGTAGTATCTCtggtgtctctgtctctgctgtcCTTTGAGCGGTACTCTGTGGTGCTCGGCAGAACTCAGTCGGACTCTTCTCAGTACTGCAGGGCCAGGCTTGCTGTCGCGGCCTCCTGGCTTTACTCGCTGATCTGGACTCTGCCACCGCTGCTGGGCTGGAGCAGCTATGGCCCAGAGGGTCCTGGCACCATCTGCTCCATCCAATGGCACCAGCGCTCAACGACAGCTCGCTCCTACATCAGCTGTTTGTTCATCTTTtgcctgctgctgccgctgctgctcaTGTTCTTCTGCTACGGGAGGATCCTGCTGGCTGTGCGAGCAGTGGAGAGACAGgtcaCCAGGGTCAACCAGTCCTCAGCTGAGCGGAGGGAAGTCCGTTTCCTTGTAATGGTGGTCTCCATGGTGACTAGCTACCTATTGTGCTGGATGCCATACGGAGTTGTTGCGATGCTCGCCTCCTTTGGACAGCCCGGCATTGTGCCGCCTGCAGCCAGTTTAATCCCGTCCCTGCTGGCAAAGACCAGCACTGTCCTCAACCCTGTTATTTATGTGCTGCTCAACAAACGGTTCTCCAGGTGTTTCCTGTACATGATCAGGTGCAGCTCAGAAGGTGCCATGTTCACATCCAGGGCCCAACAGGTACAGCGGCCCGCTCTGGTGCTAGTGGCTCAATATTCAACatagaggtcaaaggtcaccc

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777357.1 True 1076 mRNA 0.59 5 17464407 17467578

Neighbor

gene id symbol gene type direction distance location
LOC120543786 rnf145 coding upstream 268126 17176441 ~ 17196281 (+)
il12bb NA coding upstream 296959 17163715 ~ 17167448 (+)
LOC120544081 NA coding upstream 342593 17110867 ~ 17121814 (+)
LOC120544325 LOC104933051,LOC104966984,LOC100710405 coding upstream 484697 16963959 ~ 16979710 (+)
LOC120544388 NA coding upstream 570951 16890450 ~ 16893456 (+)
asl asl coding downstream 22434 17490012 ~ 17498266 (+)
LOC120544634 NA coding downstream 58068 17525646 ~ 17527150 (+)
trnat-agu_7 NA coding downstream 59657 17527235 ~ 17527308 (+)
slc13a2 slc13a2,LOC108238977,LOC106523460,LOC103362294 coding downstream 67656 17535234 ~ 17544619 (+)
cryba1b LOC103139184,LOC104958815,LOC104934409,LOC103475646,LOC103362292 coding downstream 101192 17568770 ~ 17570951 (+)
G166000 NA non-coding upstream 33759 17430241 ~ 17430648 (+)
G165995 NA non-coding upstream 54456 17400609 ~ 17409951 (+)
G165905 NA non-coding upstream 301959 17161933 ~ 17162448 (+)
G165865 LOC103376153,LOC104933044,LOC106917154,LOC105916235,LOC103138852 non-coding upstream 509127 16948670 ~ 16955280 (+)
G165849 NA non-coding upstream 543165 16917859 ~ 16921242 (+)
G166024 NA non-coding downstream 39261 17506839 ~ 17507735 (+)
G166028 LOC104958813,LOC105939289,LOC101064037,LOC102197733 non-coding downstream 43599 17511177 ~ 17514560 (+)
G166032 NA non-coding downstream 61130 17528708 ~ 17530096 (+)
LOC120544639 NA non-coding downstream 96138 17563716 ~ 17565417 (+)
G166042 NA non-coding downstream 118863 17586441 ~ 17606988 (+)
LOC120544326 bod1,LOC103369971,LOC101484775,LOC100697254,LOC102215513,LOC102291330,LOC102786418,LOC105939389 other upstream 102123 17342780 ~ 17362284 (+)
LOC120544493 LOC103370065,LOC101073234,LOC102787924,LOC100696184 other upstream 179065 17198697 ~ 17285342 (+)
ubtd2 ubtd2,LOC102788971,LOC100712015 other upstream 304262 17145476 ~ 17160145 (+)
fgf13b LOC104966980,LOC101465170,LOC103376159,LOC100710934,LOC108238960,LOC103138886,LOC103475676,LOC107084161,LOC106524025 other upstream 443991 16995758 ~ 17020416 (+)
LOC120544384 LOC100708800,LOC102793722,LOC102204659,LOC102301331,LOC103375969,LOC101471849,LOC101156840 other upstream 627236 16809886 ~ 16837171 (+)
LOC120575677 LOC103362304,LOC102306182,LOC100703890 other downstream 202537 17670115 ~ 17685280 (+)
G166064 NA other downstream 287293 17754871 ~ 17766415 (+)
LOC120543551 LOC104929447,LOC101164739,LOC103354082 other downstream 1008581 18476159 ~ 18477783 (+)
ccdc169 ccdc169,LOC104928215,LOC103354101,LOC102289504,LOC102794168 other downstream 1586565 19054143 ~ 19061286 (+)
G166610 NA other downstream 1743844 19211422 ~ 19215527 (+)

Expression


Co-expression Network