cdkn2aipnl (cdkn2aipnl,LOC102794961)


Basic Information

Item Value
gene id cdkn2aipnl
gene name cdkn2aipnl,LOC102794961
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 13114883 ~ 13116904 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777710.1
TTCGCAGACAGGAAGTTGCCTTTGTTGACTCGTCAAGGAAAAAGCAAGATGGCTAACCTGGACGTGGAGGATTTTATTCAGCAAAACAGAGCTTTGGCGGACCAGGTAGAAACATTTCGAGGTTACTGGGAGAGTGAAAAACACTGGCAGGCCAGGAGGGAGTTCATCCTACGGAACATAAGCGACTTTGAGGACCCGCATCTGGACCACCTGATCTCCCTGTCCATGGTCTGGGCTAACAACGTCTTCCTCGGCTGTCGGTATAGCACAGAGCTCCTGGAGAAAGTGAAGGAAATGGCTGAAGGCGTCGTGGTGGAGGACGCACCGGTCTTCAAGACAAGAGATGAGATTATGAAGAAGCAACAGGGTCGATGACCGGCTCAGTCGCATTATCCCTTCTGGTCGCGTCTGATCAAGCCTGAAGACTGATGGGACTCAGCTGTTACGTACATGTATACAGGCTGCGATTTTAAGAAGTCTGGCCACTTACACTGTAGGATTGTAACACTATGATGGTAACTGATGTGATCAGAGTGTAAACatcaacaatcttttttttttttttttttttttcaacaaaagcAGAGATATTGTTATTCTGCATTTAATTGTATAGACACAACTAAGATGTTTTTGACAGTGTGGGAGCTTCACTGCTCATCCATTTTTAcactttcttttaaaaagcGTACTCATTGTTtttggtattgtttttttaaataaattttagATGAAAGATGACACATAATCTTGTCATTATGTGTTTAGCAAAATAAATAACATCCTTTCTTCTCA

Function

symbol description
cdkn2aipnl Orthologous to human CDKN2AIPNL (CDKN2A interacting protein N-terminal like).

NR:

description
PREDICTED: CDKN2AIP N-terminal-like protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777710.1 True 795 mRNA 0.42 3 13114883 13116904

Neighbor

gene id symbol gene type direction distance location
sar1b sar1b,LOC107713617,LOC107603246,LOC102795722 coding upstream 240844 12865247 ~ 12874039 (+)
LOC120575626 NA coding upstream 314871 12797997 ~ 12800012 (+)
pitx1 pitx1,LOC100690583 coding upstream 354607 12747967 ~ 12760276 (+)
LOC120544088 LOC102798793,LOC104924243,LOC101475378,LOC100699679,LOC101078553,LOC103363335,LOC108238083,LOC107386699 coding upstream 481996 12611856 ~ 12632887 (+)
larp1 larp1 coding upstream 526297 12529315 ~ 12588586 (+)
ppp2cab ppp2ca,LOC107085894 coding downstream 28029 13144933 ~ 13155644 (+)
skp1 skp1,Skp1,SKP1 coding downstream 40178 13157082 ~ 13162735 (+)
vdac1 vdac1 coding downstream 164991 13281895 ~ 13293010 (+)
c16h5orf15 kct2,clg07h5orf15,LOC106603818,LOC106911376 coding downstream 177386 13294290 ~ 13303379 (+)
fstl4 fstl4,LOC103365844 coding downstream 382174 13499078 ~ 13742749 (+)
G165062 NA non-coding upstream 184609 12918433 ~ 12930274 (+)
G165026 NA non-coding upstream 227188 12830761 ~ 12887695 (+)
G165037 NA non-coding upstream 306790 12807784 ~ 12808093 (+)
G165000 LOC103376870 non-coding upstream 520137 12594521 ~ 12594746 (+)
G164894 NA non-coding upstream 573569 12489674 ~ 12541314 (+)
G165078 NA non-coding downstream 3905 13120809 ~ 13121842 (+)
LOC120544692 NA non-coding downstream 190468 13307372 ~ 13387090 (+)
G165161 NA non-coding downstream 354114 13471018 ~ 13471231 (+)
G165162 NA non-coding downstream 359097 13476001 ~ 13476222 (+)
G165179 NA non-coding downstream 632960 13749864 ~ 13750173 (+)
G165043 ddx46,LOC102797024 other upstream 294174 12817231 ~ 12820709 (+)
G165033 NA other upstream 317583 12794560 ~ 12797300 (+)
lcp2a lcp2 other upstream 646569 12450762 ~ 12468314 (+)
LOC120575591 LOC104924162 other upstream 767831 12329957 ~ 12347052 (+)
LOC120544113 LOC104924140 other upstream 803014 12294593 ~ 12311869 (+)
gabra6b NA other downstream 1745757 14862661 ~ 14901003 (+)
G165556 yipf5,LOC102777143 other downstream 2839576 15956480 ~ 15958135 (+)
G165702 NA other downstream 3468238 16585142 ~ 16626346 (+)
LOC120544324 NA other downstream 3619760 16736664 ~ 16754289 (+)
LOC120544384 LOC100708800,LOC102793722,LOC102204659,LOC102301331,LOC103375969,LOC101471849,LOC101156840 other downstream 3692982 16809886 ~ 16837171 (+)

Expression


Co-expression Network