mat2b (mat2b)


Basic Information

Item Value
gene id mat2b
gene name mat2b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 392067 ~ 427766 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777749.1
CAGTTAGCTACACACCAGAAGAATAAGAGTGTCAACATCCGTCTGATTGCTCTGTCACTCCGGACACTTTCTACAGATTTCTACCGGACCCTGCTGGTCTGTTCTGGACCCTGCTGGTCTGAGAGGATCGTATATGCCTGGATTTGAGTTCCCTGTTTCGGAGACAGAAGCAGAGATGAGCTGCGCAGGCGCAGAACTGAGAATCATCTTCAGCCCAGGTCGCGTGCAGCTGATTCAGGAGGAGGCGATGGTGCCGGCGGCTCCGAGCGTCCTTGTTACCGGGGCGACGGGTCTGCTGGGTCGGGCCGTACTCAGAGAGTTCCAGAGCAGCGGCTGGTTGGTCAGCGGGACGGGATACCGGAGGGCCAGGCCCCGCCTCCTCCGCTGTGACCTCACAGACGAGGACGCCGTCAGGGCGCTGATGCAGCAGCTCAAGCCTGACGTGGTGGTCCACTGTGCAGCAGAGAGACGTCCAGATGTTATGGAGAGACACACTGAAGCCGCTGTCAATCTCAACGTGCACGCCACGAGCACGCTCGCCAAGGAGGCCGCTGTGTGTGGAGCCTTCCTGCTCTACATCAGCACGGACTACGTGTTTGACGGGAGGAACCCTCCGTACGGAGAAGACGACAGTCCCAACCCTCTCAACGTTTACGGACGCAgcaaagtagagggagagagagagacactaagACACTGTCcaggtgcTGCGGTGCTGCGGGTGCCCGTTCTGTTCGGGGAGGTGGAGTCTGTGACGGAGAGTGCGGTGACGTCTCTGTGGCTGGACGTCCAGAACGACTCCGAGGTCTCTCTGGATCACCGCCTGCAGAGGTTCCCCACAGACACCAGAGACGTGGCCGCGGTCTGCAGGAAGCTGgcccagagacagagacagGACCCGTCCATCAGAGGAATCTTTCATTTTTCGGCTAAAGAGCAGATGACCAAATATGAGATGGCCGTCGCCATGGCAACAGCCTTCAACCTGCCGTCCAACCACCTTATTCCTctgaCGGAGCAGCTGGCGGCGGCGACTCCTCGACCAATCAACAGCCAGTTGAACTGTTGTCGTCTGGAGCAGCTGAACCTGAGCATGGAGCCGCGAGCTTTCACCTCCGCCATCACAGACTGTTTGTGGCCCTTTACCCCGGACAAACGCTGGAGACAGACCGTCTTCCACtgacgtggagagagagagagagagaggcaggcagacagacagacagacattccaGTGActacaggcaggcagacagacagacagatatatattttatgtttagcTATCAATAAGGAAATTTTACTTAAAAACTActgatttatttttcagaataaaagtctgTCATTAGAGAAGATAGTTATTAATTGTGACTGAGAGAATAAATATGTACGGTGTATATTTAGTGTAACctaacccccctccccccgtgATTCTACTCTAGCTCATGTAAAGACTGTCAACACTTCACAATAAACATCTGAAGTTCTGAA
>XM_039777750.1
AGTTAGCTACACACCAGAAGAATAAGAGTGTCAACATCCGTCTGATTGCTCTGTCACTCCGGACACTTTCTACAGATTTCTACCGGACCCTGCTGGTCTGTTCTGGACCCTGCTGGTCTGAGAGGATCGTATATGCCTGGATTTGAGTTCCCTGTTTCGGAGGAGGAGGCGATGGTGCCGGCGGCTCCGAGCGTCCTTGTTACCGGGGCGACGGGTCTGCTGGGTCGGGCCGTACTCAGAGAGTTCCAGAGCAGCGGCTGGTTGGTCAGCGGGACGGGATACCGGAGGGCCAGGCCCCGCCTCCTCCGCTGTGACCTCACAGACGAGGACGCCGTCAGGGCGCTGATGCAGCAGCTCAAGCCTGACGTGGTGGTCCACTGTGCAGCAGAGAGACGTCCAGATGTTATGGAGAGACACACTGAAGCCGCTGTCAATCTCAACGTGCACGCCACGAGCACGCTCGCCAAGGAGGCCGCTGTGTGTGGAGCCTTCCTGCTCTACATCAGCACGGACTACGTGTTTGACGGGAGGAACCCTCCGTACGGAGAAGACGACAGTCCCAACCCTCTCAACGTTTACGGACGCAgcaaagtagagggagagagagagacactaagACACTGTCcaggtgcTGCGGTGCTGCGGGTGCCCGTTCTGTTCGGGGAGGTGGAGTCTGTGACGGAGAGTGCGGTGACGTCTCTGTGGCTGGACGTCCAGAACGACTCCGAGGTCTCTCTGGATCACCGCCTGCAGAGGTTCCCCACAGACACCAGAGACGTGGCCGCGGTCTGCAGGAAGCTGgcccagagacagagacagGACCCGTCCATCAGAGGAATCTTTCATTTTTCGGCTAAAGAGCAGATGACCAAATATGAGATGGCCGTCGCCATGGCAACAGCCTTCAACCTGCCGTCCAACCACCTTATTCCTctgaCGGAGCAGCTGGCGGCGGCGACTCCTCGACCAATCAACAGCCAGTTGAACTGTTGTCGTCTGGAGCAGCTGAACCTGAGCATGGAGCCGCGAGCTTTCACCTCCGCCATCACAGACTGTTTGTGGCCCTTTACCCCGGACAAACGCTGGAGACAGACCGTCTTCCACtgacgtggagagagagagagagagaggcaggcagacagacagacagacattccaGTGActacaggcaggcagacagacagacagatatatattttatgtttagcTATCAATAAGGAAATTTTACTTAAAAACTActgatttatttttcagaataaaagtctgTCATTAGAGAAGATAGTTATTAATTGTGACTGAGAGAATAAATATGTACGGTGTATATTTAGTGTAACctaacccccctccccccgtgATTCTACTCTAGCTCATGTAAAGACTGTCAACACTTCACAATAAACATCTGAAGTTCTGAA

Function

symbol description
mat2b Predicted to enable methionine adenosyltransferase regulator activity. Predicted to be involved in S-adenosylmethionine biosynthetic process. Predicted to act upstream of or within one-carbon metabolic process. Predicted to be part of methionine adenosyltransferase complex. Is expressed in anterior neural tube and optic cup. Orthologous to human MAT2B (methionine adenosyltransferase 2B).

NR:

description
methionine adenosyltransferase 2 subunit beta isoform X2

GO:

id name namespace
GO:0045226 extracellular polysaccharide biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0008831 dTDP-4-dehydrorhamnose reductase activity molecular_function

KEGG:

id description
K00789 metK; S-adenosylmethionine synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777749.1 True 1491 mRNA 0.54 8 392067 427766
XM_039777750.1 False 1415 mRNA 0.54 7 392067 427765

Neighbor

gene id symbol gene type direction distance location
LOC120544159 NA coding downstream 25818 362006 ~ 366249 (-)
LOC120544162 NA coding downstream 72452 312392 ~ 319615 (-)
LOC120544147 NA coding downstream 197712 185412 ~ 194355 (-)
slc23a1 NA coding upstream 10185 437951 ~ 462468 (-)
oatx LOC103373994,LOC104932490 coding upstream 80371 508137 ~ 536952 (-)
pfdn1 pfdn1 coding upstream 132578 560344 ~ 568709 (-)
tmprss15 NA coding upstream 163268 591034 ~ 632939 (-)
LOC120544220 NA coding upstream 208888 636654 ~ 663746 (-)
LOC120544187 NA non-coding downstream 13381 371982 ~ 378686 (-)
G162242 NA non-coding downstream 35541 356211 ~ 356526 (-)
G162186 NA non-coding downstream 71249 320246 ~ 320818 (-)
G162185 NA non-coding downstream 127597 262633 ~ 264470 (-)
G162221 NA non-coding downstream 139077 250212 ~ 252990 (-)
G162258 NA non-coding upstream 34912 462678 ~ 462884 (-)
G162265 NA non-coding upstream 52707 480473 ~ 480767 (-)
G162269 NA non-coding upstream 106427 534193 ~ 535481 (-)
G162261 NA non-coding upstream 124632 552398 ~ 592059 (-)
G162262 NA non-coding upstream 164002 591768 ~ 600857 (-)
LOC120544212 LOC101481373,LOC102305685,LOC102212117 other downstream 235252 101803 ~ 156815 (-)
ndufa2 ndufa2 other downstream 291360 94635 ~ 100707 (-)
G162166 NA other downstream 368630 21716 ~ 23437 (-)
pwwp2a pwwp2a,slc23a1,LOC102781148,LOC103395589 other upstream 43326 471092 ~ 502104 (-)
LOC120544218 LOC103373995,LOC103459907,LOC105918498 other upstream 115938 543704 ~ 558922 (-)
ttc1 ttc1 other upstream 142469 570235 ~ 578849 (-)
G162311 rps14,RPS14,LOC100194652 other upstream 359005 786771 ~ 794731 (-)
LOC120544221 NA other upstream 401329 829095 ~ 844858 (-)

Expression


Co-expression Network