LOC120544162


Basic Information

Item Value
gene id LOC120544162
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 312392 ~ 319615 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777762.1
CGGGCTTCAGACAGCAGCCATGTTGGTTCTGCTCTGGTTATTGatcctgatgatgatgatgatgatgatgaagattgACGcTGTCTCTGCAGAGACGGTCAGGGCTCTGAGTGGGGAGGGGGTCCTGCTGTCCTCCCAGCTGCGGGGGGGATTGGGGGGGGGTCAGGACGTCCGGTGGACCCACCCCCGCCTGCTGCTGTCCCTGAAGAACAACGTGACGGCGTGCCACCACGGCCGCTGCTCGCTGCAGAGAGACGGCTCGCTGAGGTTCAGCCGCGTCACGCCAGCAGACGCAGGAAACTACAGTCTGGAGGTGTTCGCCGCAGACGGGACCAGACTGCTGCACAGGCACTTCCTGCTCACAGTGGGGGGGTCTGCAGataaTATCAGCAGCAGTGTGTTGGTGCCGGTGTTGATCTGCTGCTTCCTCTTCCTGCtgttcttcatcatcttcttcatcCTCAGAAGGAGGCGGAGCCAGAGCACAAGGAGCACAGGTCGGCTGGAGGAAAATGTTTACGTAGAGATGAAGAGTCACCATGACAACAAGACGAAAGATGAGGAGAAGTCTCAGtatgTTCCCTGTCATCCTGTTGTTTCCATGGAAACCCCAATCACAGAGCCAAGGTCTGTGGATGAAGACATCTACGTGTGACGACCAATCAGAACCCTCCACTCCCCTTCAGTCTGGTGTCCTCTCTCAGTTATTAACATGAAAATAAACTTTAGGATGTTTCAGTTCTTCTTGTTTATTAATAACCTGAGTCAGAACTCAAAGTAGACGTTTGCCTTCATGTGTGAAAAGTTTGGTCCAGACTTTTGAATGACGTCATACTTTCACAGCCGCAGACGGCGCCAAACAGCCAGGATGACCCGGAGCAGGAAGTGACACGGGCCACATGTTTCTGTCCCAACTTGACCAAACATACTGAACATTTTTCAGATAAACTACAAACTCAGCAGACTCACGCTACGCTCCACACCACCGGCACAACACAACGCAAAATATACACAAACTAAAaggtaataataaaaacagatcaagACATGCGATTACAGGATGTAAATAAAGCATCATTTCAGTA
>XM_039777764.1
CAGACAGCAGCCATGTTGGTTCTGCTCTGGTTATTGatcctgatgatgatgatgatgatgatgaagattgACGAGACGGTCAGGGCTCTGAGTGGGGAGGGGGTCCTGCTGTCCTCCCAGCTGCGGGGGGGATTGGGGGGGGGTCAGGACGTCCGGTGGACCCACCCCCGCCTGCTGCTGTCCCTGAAGAACAACGTGACGGCGTGCCACCACGGCCGCTGCTCGCTGCAGAGAGACGGCTCGCTGAGGTTCAGCCGCGTCACGCCAGCAGACGCAGGAAACTACAGTCTGGAGGTGTTCGCCGCAGACGGGACCAGACTGCTGCACAGGCACTTCCTGCTCACAGTGGGGGGGTCTGCAGataaTATCAGCAGCAGTGTGTTGGTGCCGGTGTTGATCTGCTGCTTCCTCTTCCTGCtgttcttcatcatcttcttcatcCTCAGAAGGAGGCGGAGCCAGAGCACAAGGAGCACAGGTCGGCTGGAGGAAAATGTTTACGTAGAGATGAAGAGTCACCATGACAACAAGACGAAAGATGAGGAGAAGTCTCAGtatgTTCCCTGTCATCCTGTTGTTTCCATGGAAACCCCAATCACAGAGCCAAGGTCTGTGGATGAAGACATCTACGTGTGACGACCAATCAGAACCCTCCACTCCCCTTCAGTCTGGTGTCCTCTCTCAGTTATTAACATGAAAATAAACTTTAGGATGTTTCAGTTCTTCTTGTTTATTAATAACCTGAGTCAGAACTCAAAGTAGACGTTTGCCTTCATGTGTGAAAAGTTTGGTCCAGACTTTTGAATGACGTCATACTTTCACAGCCGCAGACGGCGCCAAACAGCCAGGATGACCCGGAGCAGGAAGTGACACGGGCCACATGTTTCTGTCCCAACTTGACCAAACATACTGAACATTTTTCAGATAAACTACAAACTCAGCAGACTCACGCTACGCTCCACACCACCGGCACAACACAACGCAAAATATACACAAACTAAAaggtaataataaaaacagatcaagACATGCGATTACAGGATGTAAATAAAGCATCATTTCAGTA
>XM_039777765.1
CGGGCTTCAGACAGCAGCCATGTTGGTTCTGCTCTGGTTATTGatcctgatgatgatgatgatgatgatgaagattgACGcTGTCTCTGCAGAGACGGTCAGGGCTCTGAGTGGGGAGGGGGTCCTGCTGTCCTCCCAGCTGCGGGGGGGATTGGGGGGGGGTCAGGACGTCCGGTGGACCCACCCCCGCCTGCTGCTGTCCCTGAAGAACAACGTGACGGCGTGCCACCACGGCCGCTGCTCGCTGCAGAGAGACGGCTCGCTGAGGTTCAGCCGCGTCACGCCAGCAGACGCAGGAAACTACAGTCTGGAGGTGTTCGCCGCAGACGGGACCAGACTGCTGCACAGGCACTTCCTGCTCACAGTGGGGGGGTCTGCAGataaTATCAGCAGCAGTGTGTTGGTGCCGGTGTTGATCTGCTGCTTCCTCTTCCTGCtgttcttcatcatcttcttcatcCTCAGAAGGAGGCGGAGCCAGAGCACAAGGAGCACAGGTCGGCTGGAGGAAAATGTTTACGTAGAGATGAAGAGTCACCATGACAACAAGACGAAAGATGAGGAGAAGTCTCATTCCCTGTCATCCTGTTGTTTCCATGGAAACCCCAATCACAGAGCCAAGGTCTGTGGATGAAGACATCTACGTGTGACGACCAATCAGAACCCTCCACTCCCCTTCAGTCTGGTGTCCTCTCTCAGTTATTAACATGAAAATAAACTTTAGGATGTTTCAGTTCTTCTTGTTTATTAATAACCTGAGTCAGAACTCAAAGTAGACGTTTGCCTTCATGTGTGAAAAGTTTGGTCCAGACTTTTGAATGACGTCATACTTTCACAGCCGCAGACGGCGCCAAACAGCCAGGATGACCCGGAGCAGGAAGTGACACGGGCCACATGTTTCTGTCCCAACTTGACCAAACATACTGAACATTTTTCAGATAAACTACAAACTCAGCAGACTCACGCTACGCTCCACACCACCGGCACAACACAACGCAAAATATACACAAACTAAAaggtaataataaaaacagatcaagACATGCGATTACAGGATGTAAATAAAGCATCATTTCAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777762.1 True 1085 mRNA 0.51 5 312392 319615
XM_039777764.1 False 1066 mRNA 0.51 5 312392 319608
XM_039777765.1 False 1080 mRNA 0.51 5 312392 319615

Neighbor

gene id symbol gene type direction distance location
LOC120544147 NA coding downstream 118037 185412 ~ 194355 (-)
LOC120544159 NA coding upstream 42391 362006 ~ 366249 (-)
mat2b mat2b coding upstream 72452 392067 ~ 427766 (-)
slc23a1 NA coding upstream 118336 437951 ~ 462468 (-)
oatx LOC103373994,LOC104932490 coding upstream 188522 508137 ~ 536952 (-)
pfdn1 pfdn1 coding upstream 240729 560344 ~ 568709 (-)
G162185 NA non-coding downstream 47922 262633 ~ 264470 (-)
G162221 NA non-coding downstream 59402 250212 ~ 252990 (-)
G162218 NA non-coding downstream 63235 248672 ~ 249157 (-)
G162206 NA non-coding downstream 91951 220136 ~ 220441 (-)
G162187 NA non-coding downstream 118778 116055 ~ 193614 (-)
G162186 NA non-coding upstream 631 320246 ~ 320818 (-)
G162242 NA non-coding upstream 36596 356211 ~ 356526 (-)
LOC120544187 NA non-coding upstream 52367 371982 ~ 378686 (-)
G162252 NA non-coding upstream 78208 397823 ~ 398179 (-)
G162258 NA non-coding upstream 143063 462678 ~ 462884 (-)
LOC120544212 LOC101481373,LOC102305685,LOC102212117 other downstream 155577 101803 ~ 156815 (-)
ndufa2 ndufa2 other downstream 211685 94635 ~ 100707 (-)
G162166 NA other downstream 288955 21716 ~ 23437 (-)
pwwp2a pwwp2a,slc23a1,LOC102781148,LOC103395589 other upstream 151477 471092 ~ 502104 (-)
LOC120544218 LOC103373995,LOC103459907,LOC105918498 other upstream 224089 543704 ~ 558922 (-)
ttc1 ttc1 other upstream 250620 570235 ~ 578849 (-)
G162311 rps14,RPS14,LOC100194652 other upstream 467156 786771 ~ 794731 (-)
LOC120544221 NA other upstream 509480 829095 ~ 844858 (-)

Expression


Co-expression Network