XLOC_004886


Basic Information

Item Value
gene id XLOC_004886
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 35921177 ~ 35925412 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010979
CTTTGCTGAAGCAATGAGTTCATTTTTGCATAGTGACTCTTCCATGTCCATCTGAATCAGAAGAATGTGCACTGAGGGCCCTGATTCCCTCAGGAAGGACCTGTGGAAGAACACATAAAAGAATGAAGCCTCTGTGTCAAACTGGTGTAAAGAGAGCAGAAGAAAACGCTCAGTGGACAAGCCCAAGGCTGGACCAAGGTTTCTCACATCAGCTCCAGTGAGAAGATTGGAGAATGTTGTTACCTGACAGAAACCATGATCATTAATATGACTACATGAGacaaaattgtaccttaaaaGTCCCTTAATACTATTAGAATAACAACATTTGATATCTACAATTCTATAAAGATTAAACATTACCTCTAAGAATCTGTTCTTGTCCTGATTAGTTTTGTTCAGATGGTTGTTTAACAGGTCTCTAAGAGACTGATGGGTTTGCAGATGGAAATACATTTTCTGAAGTTCTTCTGTCTCCTGATTTCCAAATTCTGAATACTTCAACCTAAGAACAGAGTCTGGTGTAGAACAATTCAAGAGAAAGCTTTTGGCAATTTCATAGACTTCCTCCTCATCCATGGTTTTGTTTGACTCAATTTTGTCTCTTGTCTCAACAAAAACAGGACCTTCAACCATTTTCACAAGATCAGAATCATCTTCAAGAGTCTCCATTTCTTCATCAATCTCTGCATCTTGTACCTTGTCAACTTCCATAGAAGCATCATCTTCTTGTGCCTCATCAGGGAATTTGTTAACTTTCTCTTGAAACTCAGTAAATTCTCTGTCAATGTGATGAGCTTCACTTTCTTCTCTATTTTCCTCTTTATTATGATGCAATTTGTCAATTTTCTTTAAAGCCTGCAGGAGTGCACTAGCACAAGCATCACCATGGAAGCCAACAAATGCATCGGTTACGCTAAAATTGGCTTCACTTGAATCAGAATGCTGGATTTTTGAAAACTCCCGCGCCCACTTTTTGAGTTTTTCCAAAACTCTGTGTTGCCAAGGAGCCAAATCTGTACTCCTATCAACTTTGTGTTTTTCCAGTCTGTTCTTAAGAGGAACAGGAAACTTTTTGTAGACCTTTTCCTGGTCTTCCACCACAACAAGTCTGAAGTCTCTGTGAACTCGACACTTTACTCTATGTGAACCTAGTCCCAAGTCAACATACTGCTGCCCACTGAAGTAGACATAGTATTGATTCAAGGCATCATACAGGCTCTCATAGAGATTAAGGAGATTCAACAGGATTACAGTTCGACCTGTCTCCATGCACGCCTTGATTCTGCTCACATTGCGACATATCTGGGCATACTCCTGATCTTTGGGAAACCCTGATCCAAAGACAATTTCTGGGCATTTCTGTGTATAATTCTCCTTTGAGAAAATATGGTGTTGGATAATGTACAAGGCAGCATTGTTAGTTGTGAGCAAAAGAAGGTATCGGCATTCTTTGTCAATGTGGTGGTCGAGATTCTGTTCAATCATGTTCAATGTGTTTGGCCTTTGGACATTTTGAATGTTTTGGAAGATGTCCTTGAAGTAATCAAGTGGATCAAATCCATCCCTTTGTCCACTGAAGTTTCTCAACACTGCCTCTGCCAACTCTTTGTCAGATGGCTCCTGATCTGAACATTTGACTGTGTCAAAAAGCATTTTTATCAAGCCATAATAATCTCTGAGTCCAAAGAATTGTTCACTGTCAGTTTTACAGATGCTCAGAAAACATTTTGCCAACTTTGACAGTAGGTGCTTTATTTTGAGAAGAACAGGTTGGGAGGATGAGCAGATACCTTCGGCTGTCTCTACTAAGTCTTTTTCACTCGGGTCCCAACGTGACACAAAAATACCTCTGTTCATTTTTGCTGGATCGAGAGCCCAGTTTGAGATTCCAACAAACCCAACTTTCATGTATGACTCTGGGTTGTCACTGTCTATGCATCCATCCTCAAGAAGAGGATGCAATGTCTTCAGTGGCATCTGTGGCGAGTCCTCTGCAAGTCCTATTTCATCCAGTACGACTACTGACACATACTCATCTAAGTTCTTATCCTTTTGGAAACGAGCACAGTTTCGGAAGGTTCCGATGATTCCTTCAGGGCTTGAGTGAGGGCTGCATTGAAAAGACACCATGTGAACCTCCTTGAGTTTCTTGAATAAATCACAGTGTGAAGCCTGGCGTTGCATTGCATCTGCTATGACAGTCTTAGCAAGAGATTTAGAGCTCCCAGGTTTGCCAACCAGAAAGAGTGGAATCCTCAACTCAATGCAGACCACCATAAGGAACACATTCTCTTTCAAAGCCATATTTTTGGCAATCGTTTCTCTTGTTTGAATGTTCTTAAGTAAAAAGTCTTGGCATGAAGCTATCTCCTGCTCCAGAGACTCTTCAGAGTTGAACTGATCAGGAAAGCATTTGCTGATAGTCGCTAGGTATGGTCTTTTGTTTTCAAGAGATGGGTAATAGCAAACACCAACTGCAAGCACCAAGCATTTCAAGACCATCTGCACATTTTCAAATCTCGGAAAATCTTGGGatggaaaaaaaatgtctctgtgGTTGTAAAACCAAAGAAGGACACCCATTGATCTCTCCACATCTCTAAGGCTTACAAAGCTGCATTCATCTGCTTGGTTGCGCATGTATTTCTGAGATGCAGCCAAAACATTCGTGATCACATTCTGGCATGAAAGAGGCAATCTATGATCTCTCATCTTTTTTTTCACAATCTGTCGAATGTAAGAGAGTTCAGTTGAATCGCTTAATTGTCCAAAATCCCACACCAGAGGCACCATGCTCGGGGGTAAAGGGTGCACACGGTACACAAGCTGTCTCATGGGGACTTTACCAAGGCGATCCTCAGTTTCCTCAGCTTTTACTCTGTATCCTAGACCGGCTCGCTCTAAGCGATCAACCATCTTTGTCGTGTGTCTTCTGTATGGATTGCAGGCAGCAATTATTTTCAGACCAGAGTTTTTCTTCAAAGGGTATCCTTTTACAGTTTTGTCACATAGTACTTCTTTGATGGCAAAGATTGCTTCGGTTGTGTTGGCTTcatcaaaaaacaaaactgtgtcAAGTTTATATTTTTGACGATTTTTCTGAGCAAGTTCCTCTGCTTCCCGAACCTTCTTATAGATGGTCTCTGAAGTTGTACCGCCATGAACTTTGACTAGCTTCATGTTTTCAACATCTCTGCCTTCGCGTTGTAGATCACATAGAAAGCGAACAAGCCGAGTCTTTCCACAGCCAGTTTCCCCCATGATGATAACAGGAATTTCACATCTGAATCTCATATGTATAGCCAGCATCTTCATGACATTGTCAGTGGTTAACTCATATGTAGGATCTGGATCAAACTTGCCTTTTTCACATCCTTTTTCGGCACCAACAACAAAGGACATTTTTTGTAACTTGTCCTCTCTGGTCAGGTCATCAAAGTCCTTTGACAGATTGATCATTTGTCGTTGAATGTCTGAAAATAGCTCTTGTGTCATCACATTTCTCATTAGCACTTTGCCACTTTTTGAATCAACCGCATTAAGAATTGTCCCATTTTGTTTCACATGAAATCCTAAGAAAGACATGCTTACGTGATCTGCATTGAAAAATATGTATGGGTGAGACTCATTTTCCCATCGTTTTCGGAAAGACAGGATTTCTTCCTCATCTTCATTCTTAGAGAAAAAGGAGGGGCTCTGGTCAGAGATGTCAATGGAAGGTGAGGCAAAATCTCGAGCCATGTGAATCATGAATTTTACTATGAAGTCTTTGAAGCCACTTAAGGTCTCCCCACAAAAGTCTGAATCACAGAACAAAGATTTCTCACAGTCTTTAAGCTGCAGGTTAAGAAACCAAGTAAAGTGCTTAAGTTCAGCCCAGGATGGGTCCTTCAAGCCATAGTTTGACAAAAGATGATGGAGACAATCAACTGGATCCCCTTCTACAGAATGAGCTTGATATGTAAATCTATCCAAGTTCATACTCCTGTTAAACCGCCTGAGGTATTGGTAGGGTCTCTGAATGTCTTCACTTTCAAACTCTTCTTTATCCATTAGTGGATCCAATGATCTAAAGCTCTCGTTTGTTTTCATGATCTCTTTGATGTCTTTAGGAGGCCTGCAGAAGATAGTAGGTAATGTATTCAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010979 True 4149 lncRNA 0.41 2 35921177 35925412

Neighbor

gene id symbol gene type direction distance location
XLOC_004885 NA coding upstream 78806 35838288 ~ 35842371 (+)
XLOC_004880 chmp6b coding upstream 213819 35587971 ~ 35707358 (+)
XLOC_004884 NA coding upstream 214229 35705133 ~ 35706948 (+)
XLOC_004883 baiap2b coding upstream 231938 35654749 ~ 35689239 (+)
XLOC_004882 baiap2b coding upstream 268126 35650321 ~ 35653051 (+)
XLOC_004887 NA coding downstream 56504 35981916 ~ 35984381 (+)
XLOC_004888 NA coding downstream 119901 36045313 ~ 36049933 (+)
XLOC_004889 btbd17a coding downstream 166806 36092218 ~ 36107156 (+)
XLOC_004890 map2k6 coding downstream 183659 36109071 ~ 36161256 (+)
XLOC_004891 NA coding downstream 349210 36274622 ~ 36277231 (+)
XLOC_004881 FO681473.1 non-coding upstream 309363 35611698 ~ 35611814 (+)
XLOC_004879 NA non-coding upstream 572766 35345825 ~ 35348411 (+)
XLOC_004876 CU459210.1 non-coding upstream 813179 35106575 ~ 35107998 (+)
XLOC_004892 NA non-coding downstream 429863 36355275 ~ 36376878 (+)
XLOC_004896 NA non-coding downstream 611351 36536763 ~ 36538616 (+)

Expression


Co-expression Network