LOC120544166


Basic Information

Item Value
gene id LOC120544166
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 1701776 ~ 1724485 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777769.1
TATATAAAGCCGCATCCTGATGGGAAAACAAAGACATAATACAACAGAATGAAGATCTCTGTGAGTTTTacgctgttgctgctgctcggCGCTGTCCCCGCAAGTGAAAGCCAGCAGACTTATCCTCCAGACATCAACACTGTGCTGACACAGATGGCCGCCTGGTTGGTTCAAATGAAAGCGGACATGATTACAGGTCAAGCACAGCTGCAGACTCAATTGGACACGctgaaacaacaacagctaGtccagCAGGTTGCATTCTCAGCCTCTCTGGTGGTTGCAGGTGAATCACGTATTGGACCCGTTACATTAGACACTACCCTGATCTACAAATACGTCCCCACCAACATTGGAAATGCCTACAACTCAAACACAGGTCTGTTCAGTGCCCCGGTGAGAGGAGCGTACCACTTTGAGTGGCATTTCAATGGAGACAGCAGCGGCGGTTCAGCGGGTTGGTTGGTCAAGAACTCACAGAAAGTTTTCGCCGTATACGAGCAACAGGCCACCGGTTTTATGAGTGTTTCTAATGGTCTTACACTGCTGCTGGAGGTGGGAGATGTTGTGTTTGTGCGTCTGGCGGCTACCAGTTTCGTGTTTGACAACTTCAATCACCACACCACCTTCAGTGGCCATCTGCTGTTCCCCATGTAAGACAgaaacagcagctctgtgataGTCACACAGGTTTTTGGTGTCTTAAACAAGTCTTCATAGCACTTCATAGATTTAAACTGATTTCATCTGCAtccaaataataataagtaataattgTTAACAGGGATCTTTTTTCCTTCAAATTTTAAAGTGGTTAATGTTTCTGATTCTCTCTTGTTTCTGTCATCTTGATCATATAATAAACAAATATCATTGCAATGCTA
>XM_039777770.1
AATAACAGGAAAGACCTTCTATTTATGTAGTTAATCATTAGACCACAATTTCAACATAACAAGATTATATAAAGCCGCATCCTGATGGGAAAACAAAGACATAATACAACAGAATGAAGATCTCTGTGAGTTTTacgctgttgctgctgctcggCGCTGTCCCCGCAAGTGAAAGCCAGCAGACTTATCCTCCAGACATCAACACTGTGCTGACACAGATGGCCGCCTGGTTGGTTCAAATGAAAGCGGACATGATTACAGGTCAAGCACAGCTGCAGACTCAATTGGACACGctgaaacaacaacagctaGtccagCAGGTTGCATTCTCAGCCTCTCTGGTGGTTGCAGGTGAATCACGTATTGGACCCGTTACATTAGACACTACCCTGATCTACAAATACGTCCCCACCAACATTGGAAATGCCTACAACTCAAACACAGgtgacgcttttcgaacctgctctgggggacgcgacAACGGCCACAACAATGGAACGGGCCGCCACTCGTGGGCCGCCACTCGCATGATGCGATCCAcaggcgcaggggcacacaacaacggggaaatgaagcGCCACAATAActggacggttgtggttagaaaaaaaaaagaatggggaaaggaaccgtcacacacaggacacaccgacaaaggaactgcaacacgcgggacaaaggtACTACCACACGCGGGGCACGATCCAATATGAttcccattaaaatgcattgcttTCTATTTCGTAATCAGCACacgaaaaaaaaaggcttttaagtaacctgtccacgacttaatagattaaaataacgtaaCTATATATCGACCTGCCGTGAGACGTGGACCTCCAACACAGTTTCTGCCAGACCTGGGCTCTGACTGTCAAcctaaacaaaaccaaaatacaGATTTTCCAAAACAGATCTGGGAATTACAGTAAACATCAATTCTACCTAAATACAGTTCAATTAGAAACATGTGAAAAACTACACATATTTAGGTCTCAATATTAGTTCATCAGGTAGTTTTCAAATGGGTGTGAATGAGCTGAGAGACAAATCAAGAAGAGCAttttatgcaattaaaagaaaaatcaaaacaGACATTCCAATTAAAACTTGGTTAAAAACCATCAGAACCCTAAGGCTTCGTCCACGACGCCAAACGGCACCTCTGATTCATATTTAGATAATTTGATAACAGTTTTATGTAGCTTCTTACCGATTTCTCCTGCTAAAAGCTAAGGGGTTAGCAATCACGGGggtgtctttttttgtctttgtagcctttacagaAGTTTTTCCATCCAGTCTGGAACTTTTGCCTCTTTTCGGAGTTGTttagcaataaatccaaactcttacatccaagatttatccactcgatTTCCATAATTTACCACGTTTTCGGTCATTTCTGCTCGTAGCTCCGTGCTGTTCGATGCTTTGCAAGAGTGTGTTGAGatttttcaaccaatgggaaggcaggtccgtcATACAAAGACTATGTAGTGGAAAAGATAGTTCACTCCAGGGAATCCGAGCgagaacaaagagtaaagtgaaaaagagagataactcCGGTCTATTACCGTTCTACTGAGAataatggcgtcactgtttagatatttgggatacatttgggccttttttaaagatgtaatgtaaatag

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777769.1 False 884 mRNA 0.45 4 1701776 1724420
XM_039777770.1 True 1669 mRNA 0.43 4 1703585 1724485

Neighbor

gene id symbol gene type direction distance location
LOC120544170 NA coding downstream 210820 1487403 ~ 1490956 (-)
LOC120544175 NA coding downstream 279568 1418067 ~ 1422208 (-)
ins ins,LOC108250678,LOC103130811,LOC106937878,LOC103476384 coding downstream 454811 1244526 ~ 1246965 (-)
nipal4 NA coding downstream 458612 1222848 ~ 1243164 (-)
LOC120544169 NA coding downstream 575695 1123379 ~ 1126081 (-)
LOC120544161 NA coding upstream 13836 1738321 ~ 1747929 (-)
LOC120544174 NA coding upstream 88929 1813414 ~ 1820635 (-)
apbb3 apbb3,LOC102778778 coding upstream 113091 1837576 ~ 1857594 (-)
LOC120543938 NA coding upstream 239220 1963705 ~ 1975306 (-)
LOC120543937 NA coding upstream 334194 2058679 ~ 2060641 (-)
LOC120544188 NA non-coding downstream 6088 1679898 ~ 1695688 (-)
G162745 NA non-coding downstream 177246 1523977 ~ 1524530 (-)
G162405 NA non-coding downstream 232656 1468875 ~ 1469120 (-)
G162403 NA non-coding downstream 247573 1453897 ~ 1454203 (-)
LOC120544182 NA non-coding downstream 296297 1383060 ~ 1405479 (-)
G162792 NA non-coding upstream 118761 1843246 ~ 1843722 (-)
G162789 NA non-coding upstream 130664 1855149 ~ 1859905 (-)
G162799 NA non-coding upstream 212412 1936897 ~ 1938333 (-)
G162817 NA non-coding upstream 333594 2058079 ~ 2091770 (-)
G162819 NA non-coding upstream 341479 2065964 ~ 2068840 (-)
G162399 NA other downstream 260958 1437253 ~ 1440818 (-)
G162398 NA other downstream 277375 1381761 ~ 1424401 (-)
G162396 NA other downstream 343253 1358186 ~ 1358523 (-)
G162358 NA other downstream 391160 1192802 ~ 1310616 (-)
G162787 NA other upstream 111484 1835969 ~ 1836502 (-)
LOC120544171 NA other upstream 163144 1887629 ~ 1891423 (-)
LOC120543939 NA other upstream 617665 2342150 ~ 2651403 (-)
G162910 NA other upstream 1102604 2827089 ~ 2829594 (-)
LOC120543772 NA other upstream 1313438 3037923 ~ 3095474 (-)

Expression


Co-expression Network