LOC120544175


Basic Information

Item Value
gene id LOC120544175
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 1418067 ~ 1422208 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777782.1
CCAACCCAGGACCAGCCTGATTCACCAGGGCAGGCACAGACAGTCAAAGAGCTGCTGGTGAAGTCCAGTCCCCTCCCAACCCAGGACCAACCTGATTCACCAGCTGACCGGAGGGTGGTGCTGATCGGTCTTCTCGGAGCTGGAAAAAGTTCCTCTGGGAACACCATCTTAGGATCAAATCGGTTTAAATCAGTCAGTGCTGAGACTGTCTCTAAGTCAGCAGAGGTTGAGGGCCGTCAGGTCACAGTGGTTGACACTCCAGGAATCACTGATCCAACCGGTAATTGCCTGTATGAGGGGATCAGGAAGTGGATAGCAGAGGCCAGTCCAGGACCACATGTCTTTGTTATTGTGGTCAGAATCGGCAGCATGTTTACAGCAGACATCAAACTGTTCAAGCTGCTGAAACAACTGTTTGAAAGAGATGCTCTGAAGTACTCCATGGTGCTTTTTACTCACGGAGACGAGCTGGGAGGTCGGTCCATTGATGGTTTGATCCGGTCCAACCAACATGTGTCTGACCTGGTCTCCATGTGGTCGAGATTCTGTGTGTTtgacaacaaaactaaaataagCAGAGATCAGGTCAGAAACTTCCTGAGGAAAGTAGATGAGATGGTCTCAGATAACGGTGGAGAACACTACACTGGTGAGATGGCTCAGACATTCCCAAATGAAAGAAGGAAACTGTCAGGTAATGCAGGACCATCAAACAGCAGTGTAtgggacatatttatgaatctCATAGAGACTCATGAAGAAGACGGTATAAACCTGGCTGCAATAGAAGAAGCAATAGGAGAAGCAATAGGAGAAGCAATAGGAGAAGCAATAGGAGCAGAAGTAGTAGCAGAAGTAGTAGCAGCTATAGAAGCAAACGCAGCAGCGACAGCAGAAGAAACAGAAGCAGAAGAAACACTAGGAGCAAAAGTATTGGAAGCAGCATTGCCAGCAGTTGTAGGACCAAAATaagaccaaataaaaaaaattcagaggATTAGttaatgttttcatttcagaccaaagatttgcgacaAGACGAGTTAACTTGTTGTAGCCGCcgggtctgcagcgttctgaaagctgccagaTCCCACCAATGAGAGGAGACGGTCTATCATCTCCATGGCAACGCCTCTTTGTACTTCTGTTCTAATTTCAgacttttaggcttttttgtatcttgatatatcatttgtttgtgaaaacacattttatttctctgattcaggGC

Function

GO:

id name namespace
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777782.1 True 1234 mRNA 0.46 3 1418067 1422208

Neighbor

gene id symbol gene type direction distance location
ins ins,LOC108250678,LOC103130811,LOC106937878,LOC103476384 coding downstream 171102 1244526 ~ 1246965 (-)
nipal4 NA coding downstream 174903 1222848 ~ 1243164 (-)
LOC120544169 NA coding downstream 291986 1123379 ~ 1126081 (-)
LOC120544177 NA coding downstream 434339 983394 ~ 983728 (-)
LOC120544156 NA coding downstream 602478 806151 ~ 815589 (-)
LOC120544170 NA coding upstream 65195 1487403 ~ 1490956 (-)
LOC120544166 NA coding upstream 279568 1701776 ~ 1724485 (-)
LOC120544161 NA coding upstream 316113 1738321 ~ 1747929 (-)
LOC120544174 NA coding upstream 391206 1813414 ~ 1820635 (-)
apbb3 apbb3,LOC102778778 coding upstream 415368 1837576 ~ 1857594 (-)
LOC120544182 NA non-coding downstream 12588 1383060 ~ 1405479 (-)
G162397 NA non-coding downstream 55842 1361983 ~ 1362225 (-)
G162395 NA non-coding downstream 68004 1349369 ~ 1350063 (-)
LOC120544185 NA non-coding downstream 80210 1320310 ~ 1337857 (-)
G162360 NA non-coding downstream 103775 1310662 ~ 1314292 (-)
G162403 NA non-coding upstream 31689 1453897 ~ 1454203 (-)
G162405 NA non-coding upstream 46667 1468875 ~ 1469120 (-)
G162745 NA non-coding upstream 101769 1523977 ~ 1524530 (-)
LOC120544188 NA non-coding upstream 257690 1679898 ~ 1695688 (-)
G162774 NA non-coding upstream 290298 1712506 ~ 1730625 (-)
G162396 NA other downstream 59544 1358186 ~ 1358523 (-)
G162358 NA other downstream 107451 1192802 ~ 1310616 (-)
G162359 NA other downstream 216633 1196113 ~ 1201434 (-)
G162352 NA other downstream 299379 1117073 ~ 1118688 (-)
chm chm,LOC104936337,LOC106675663,LOC101479632,LOC108251494 other downstream 527657 859932 ~ 890410 (-)
G162399 NA other upstream 15045 1437253 ~ 1440818 (-)
G162787 NA other upstream 413761 1835969 ~ 1836502 (-)
LOC120544171 NA other upstream 465421 1887629 ~ 1891423 (-)
LOC120543939 NA other upstream 919942 2342150 ~ 2651403 (-)
G162910 NA other upstream 1404881 2827089 ~ 2829594 (-)

Expression


Co-expression Network