LOC120544211


Basic Information

Item Value
gene id LOC120544211
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 6286906 ~ 6290324 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777827.1
CTTGACCTGACATGAACCAACGAAATATGAACCAGGAAGTGGCTCCTCGTGCCTGTTTTGCTAAAACTCTTGCGTGTTAAGACGTCACTGTATGTTAAAGCTAAGTAAAATAGgactacaaaaaaaaaggaatatcttcATACTACATTAACATCGAGCTACAAGATGGGTTTTGGACGTTGAAGTCGGTCGAGGATCGCTTGTTTTGGTCGCTGTCCGAGCAGCAGGTTTGTCTCGTCTAAATGTGAGCCGAAGCTGGAACAGCTTTTCGACATGTCGCCACCTCAGAAACATCACCTGTCGCACCTGCTGCTTCTCGCAGTCCTGCTGCCCTGGACGGCCGACGGGGCTAACAACGGGTCCGAGGCCGAGGCGGTGTCCTCCGCGCATCTGGCCGGGACCGGCGTCCACTCCGGCGGGGACGTTACGGTGAAGGAGGGATCCAGCGTGCTGATCGAGTGTAACGTGACCGCAGGCTACGATGACATCAAGTGGTACAACTCTAAAGGGCCTCTGCTTGGCGGGAAGTGGCAGATTCAGGAAGACGGAGCCCTGAACATCACCGAGGTCTCCTTCGGTGACCGCGGCCGCTACACCTGCGTTGCCTCTGGCGGCGCCGGCGTGACCAAAAACTACACCGTCACGCTCCGCGTGGCCCACAACACCAGCACCGGCCTGGGCCTGTACTACGTGATTGTCTGCCTGGTGACGTTCACCATCATCATGGCCCTCAACGTGACGCGCCTCTGCATGGTCAGCAGCCACCTGAAGAAGACCGAGAGGGCCATCAACGAGTTCTTCCGCACCGAGGGCGCCGAGAAGCTGCAGAAGGCGTTCGAGGTCGCCAAGCGCATTCCCATCGTCACGTCGGCCAAGACGCTGGAGCTCGCCAAGCAGACGCAGTACAAGACCATGGAGTTTGCGCGCCACATGGAGGACCTGGCCCGGAGCGTCCCTCTGCCGCCGCTCATCCTGCACTGCCGCACATCGGGGGAGGAGGGAGCCGAGGCGGGAAACCCGGGGCCGCACCCTGCGGAGCAGGCCGGGCCGTCGACCTCTAGGAACAGGCAAGCTATAGGCCCTCCCCACGCCGACAGGAACGGAGAGGGCGCGGAGGTGTGTCAGGCGCTGCTGTCAAATGGAGGGAACAGCGATGTCATAGTTTCAGTGCACACCGTTTCCGTGGAGGCGGACAGCGAGGATAGGGCGGGCCTCCGCGTGCCGGGCTCGCAAACAAGCGCGTCCTATGAGAGCAACGTATAAACCAGGGGTCAGCAACCTGAGGTGCGCGTCCCACCATTGGCTCGTGGTAGCGCAACCAATGGCACACCAGCAACAAAGTGGGGTCTTGAAAGAGGTCATTTGGCATGCGAATTGTGTGAATTAGAACATTTCCAAAAACGGAAATGACCTCTTTCAAAGCCATTAGCAGTTGGGATGggtaccaataccgtgacttcgataacggttcctaaacgatactttttttcaatacaaattttatgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777827.1 True 1508 mRNA 0.57 3 6286906 6290324

Neighbor

gene id symbol gene type direction distance location
LOC120575643 LOC103353475 coding downstream 104945 6072218 ~ 6181961 (-)
LOC120575636 LOC100711410,LOC102305690,LOC102207837,LOC103358844,LOC106960860,LOC102785365 coding downstream 472764 5658407 ~ 5814142 (-)
LOC120575637 NA coding downstream 483567 5799038 ~ 5803339 (-)
LOC120575590 sap30l,sp30l,LOC105890504 coding downstream 778618 5490062 ~ 5508288 (-)
serpinf1 serpinf1 coding downstream 971348 5295961 ~ 5315558 (-)
gemin5 LOC102786240 coding upstream 38523 6328847 ~ 6363792 (-)
LOC120575570 ddc,LOC102780833 coding upstream 90735 6381059 ~ 6396327 (-)
rars1 rars coding upstream 1000272 7290596 ~ 7321787 (-)
nop16 NA coding upstream 1168440 7458764 ~ 7471087 (-)
dbn1 dbn1 coding upstream 1336376 7626700 ~ 7782793 (-)
G163689 NA non-coding downstream 31254 6255384 ~ 6255652 (-)
G163643 NA non-coding downstream 123631 6162584 ~ 6163275 (-)
G163625 NA non-coding downstream 603493 5683153 ~ 5683413 (-)
G163624 NA non-coding downstream 633248 5650699 ~ 5653658 (-)
G163585 NA non-coding downstream 652843 5633351 ~ 5634063 (-)
G163694 NA non-coding upstream 11360 6301684 ~ 6301977 (-)
G163707 mrpl22,LOC102778570 non-coding upstream 78840 6369164 ~ 6370226 (-)
G163709 NA non-coding upstream 116788 6407112 ~ 6407385 (-)
G163712 NA non-coding upstream 260913 6551237 ~ 6556460 (-)
G163715 NA non-coding upstream 356912 6647236 ~ 6647570 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 1465034 4281773 ~ 4821872 (-)
G163315 NA other downstream 1466407 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 1536476 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 1592290 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 1793555 4491005 ~ 4493351 (-)
G163767 NA other upstream 966814 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 1040590 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 1571129 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 2056504 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 2078171 8368495 ~ 8380575 (-)

Expression


Co-expression Network