LOC120544239 (LOC104943257)


Basic Information

Item Value
gene id LOC120544239
gene name LOC104943257
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 4980419 ~ 4981366 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777871.1
CAGATGGAAAACTATACATACAACAGCCTCACTCTTCAGCTTGAGGGGTTAATGGTCACCAAGACTAACAAGTACCCTATCTTCTTATTTCTGCTCTTGGCCTATGTGTTCATCTTAACTGCCAACGTGGGCATCGTGATCTTGATATGGACGAATAGAAGCCTCCATCAGCCGATGTATCTCCTCTTCTGTAACCTGTCGATAAATGATGTAATGGGAAACTCTCTCCTGGTTCCACGGGTGATCGCAGACATCCTGGTGCCCCCGTCTGAGCGTGTTATTCACTACTATGAGTGTCTGATGCAAGCTTTTACCGGACATATGTTCGGCACCAACTCACACACAGTGCTCATGGTTATGGCCTTTGACAGATATGTGGCCATCTGTAACCCCCTGCGATATGCTACGATAATGAACGGCAAAATGGTGATCAAGCTGACAGTTTCTGCCTGGGGAGTGTCCTTTGTTTTGGTGGCCATTCTGCTCGGTCTGACCATACGGCTGAACCGATGCAGGACTCTGATCACAAACCCTTACTGTGATAATCCTTCGCTCTTTAAACTCTCCTGTGAGGATGTGTTCATCAATAACGTCTATGGCCTCGCTTTCACTGTCGTCCTGCTCTCGTCctctatatgcagtataattcTCACATATTCTAATATCACAGCAGCCTGTCTGACTAGTAACAGCAAATCTTTGAACAGTAAAGCCTTGAAGACCTGCAGCACTCATCTGTGCCTGTATCTGATCATGCTTGTCACTGGGCTGATCCCCATCGCCCTTCATCGCTTCCCCCAGTTCCCAGAGTACAGGAAGATTTCAGCCATTCTCTTTTACGTTGTTCCCGGCAGCCTCAACCCTGTTATCTATGGGCTGCAGTTCCAAGAAATACTCAAGTGTTTGTCAAAACTATTCCACCTTAAAAGAGTTAAACCATCATTTTAA

Function

NR:

description
PREDICTED: putative olfactory receptor 52L2

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050911 detection of chemical stimulus involved in sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777871.1 True 948 mRNA 0.46 1 4980419 4981366

Neighbor

gene id symbol gene type direction distance location
LOC120544564 NA coding downstream 230024 4717020 ~ 4750395 (-)
LOC120544566 si:ch1073-153i20.5,LOC103462478,LOC102204254,LOC107386469,LOC101485372,LOC103381127,LOC103379246 coding downstream 352037 4627154 ~ 4628382 (-)
LOC120544576 LOC107723971,LOC107375340,LOC107690788,LOC107579420 coding downstream 375776 4604055 ~ 4604643 (-)
LOC120544567 si:ch1073-153i20.5,si:ch73-368j24.13,LOC103462478,LOC107386469,LOC102204254,LOC103381127 coding downstream 377424 4601695 ~ 4602995 (-)
LOC120544579 LOC107375340,LOC107690788,LOC107719248,LOC107579420 coding downstream 485532 4494519 ~ 4494887 (-)
LOC120544283 NA coding upstream 71989 5053355 ~ 5054317 (-)
LOC120544284 NA coding upstream 80669 5062035 ~ 5062985 (-)
LOC120544286 NA coding upstream 92390 5073756 ~ 5074691 (-)
LOC120544289 NA coding upstream 101144 5082510 ~ 5083454 (-)
LOC120544290 NA coding upstream 110839 5092205 ~ 5093149 (-)
G163450 NA non-coding downstream 37028 4943176 ~ 4943391 (-)
G163447 NA non-coding downstream 78102 4902063 ~ 4902317 (-)
G163444 NA non-coding downstream 90578 4889635 ~ 4889841 (-)
G163422 NA non-coding downstream 164664 4802709 ~ 4815755 (-)
G163423 NA non-coding downstream 166048 4806490 ~ 4814371 (-)
G163456 NA non-coding upstream 174471 5155837 ~ 5156159 (-)
G163460 NA non-coding upstream 215295 5196661 ~ 5197174 (-)
G163517 NA non-coding upstream 226129 5207495 ~ 5208147 (-)
G163527 NA non-coding upstream 250424 5231790 ~ 5232680 (-)
G163535 NA non-coding upstream 282971 5264337 ~ 5266415 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 158547 4281773 ~ 4821872 (-)
G163315 NA other downstream 159920 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 229989 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 285803 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 487068 4491005 ~ 4493351 (-)
G163767 NA other upstream 2275772 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2349548 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 2880087 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 3365462 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 3387129 8368495 ~ 8380575 (-)

Expression


Co-expression Network