LOC120544289


Basic Information

Item Value
gene id LOC120544289
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 5082510 ~ 5083454 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777925.1
ATGGAGAACCAGACTTTAAACGAGGACATCCTGCTCCTGGAGGGGTTAAACATCTCCCCCCAGTCCAACATTCCTGCTttcatcatcctcctcctcatctacGTCTTTGCATTGGTGTCCAATATCAGTTTGGTCACGCTGATCTTCACGAGCAGGAGCCTCCATCAGCCCATGTATCTGCTCTTCTGCAACATGAGCATCAATGACATTTTTGGGGCAACGATTGTCACGCCGCATGTACTCCGAgatattttcattccacattcAGAGCGGTACATTCGTTACGTCCACTGCGCCATCCAGGCCTTCTGTGTTCACCTCTACGCGGCCACCACTCATACTGTTCTTATTATCATGGCTTTCGATCGCTACATGGCCATCTGCAACCCGCTGCGGTACGCCTCTGTCATGACCAACGGGATGGTGGTGAAGCTGTCGGTGTCGGCGTGGGCGGTGTCTTTGTTGATTGCGTCTACGCTCGTGGGACTCAGCATCCGTTTGTCACGCTGCAGGCGGGTTATACCCAACCCGTTCTGCGACAACGCCTCCTTGTTCAACCTCTCCTGTGAAAACGTTACTGTCAACAACATCGTCGGCATCGGCTACACGGTGCTCCTGCTCGGCTTTTCCGTCTGCTGCGTCTCGATCACCTACCTGAATATTGCGGCGGTGTGTGTGCGTAGTAAGAACAAAGCTTTGAACAGCAAAGCGCTGCAGACCTGTTCCACCCACCTGGCCGTGTACGTCTTCCTGTTTGTGTCAGCCGCCGTCATCATCGCCCTGCACCGATTCCCTCGGACGGCGGACTACAGGAAAGTGGTATCGGTGTTATGCGAAGTGACTCTGCCGGCGTTCAACGCCGTTATCTACGGGCTGCAAATTAAAGAGATCAAGCAGAGGATCATCACTTTGTTTTGCAACAGTAAAGGGGCTGGAAAGAAGTGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050911 detection of chemical stimulus involved in sensory perception of smell biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777925.1 True 945 mRNA 0.53 1 5082510 5083454

Neighbor

gene id symbol gene type direction distance location
LOC120544286 NA coding downstream 7819 5073756 ~ 5074691 (-)
LOC120544284 NA coding downstream 19525 5062035 ~ 5062985 (-)
LOC120544283 NA coding downstream 28193 5053355 ~ 5054317 (-)
LOC120544239 LOC104943257 coding downstream 101144 4980419 ~ 4981366 (-)
LOC120544564 NA coding downstream 332115 4717020 ~ 4750395 (-)
LOC120544290 NA coding upstream 8751 5092205 ~ 5093149 (-)
LOC120544291 NA coding upstream 17094 5100548 ~ 5101483 (-)
LOC120543536 LOC104931089,LOC104947899 coding upstream 79551 5163005 ~ 5163949 (-)
LOC120544301 LOC104947899,LOC104931089 coding upstream 85617 5169071 ~ 5170024 (-)
LOC120544302 LOC104931089,LOC104947899 coding upstream 89860 5173314 ~ 5174267 (-)
G163450 NA non-coding downstream 139119 4943176 ~ 4943391 (-)
G163447 NA non-coding downstream 180193 4902063 ~ 4902317 (-)
G163444 NA non-coding downstream 192669 4889635 ~ 4889841 (-)
G163423 NA non-coding downstream 268139 4806490 ~ 4814371 (-)
trnad-guc_15 NA non-coding downstream 278869 4803570 ~ 4803641 (-)
G163456 NA non-coding upstream 72383 5155837 ~ 5156159 (-)
G163460 NA non-coding upstream 113207 5196661 ~ 5197174 (-)
G163517 NA non-coding upstream 124041 5207495 ~ 5208147 (-)
G163527 NA non-coding upstream 148336 5231790 ~ 5232680 (-)
G163535 NA non-coding upstream 180883 5264337 ~ 5266415 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 260638 4281773 ~ 4821872 (-)
G163315 NA other downstream 262011 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 332080 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 387894 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 589159 4491005 ~ 4493351 (-)
G163767 NA other upstream 2173684 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2247460 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 2777999 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 3263374 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 3285041 8368495 ~ 8380575 (-)

Expression


Co-expression Network