LOC120544290


Basic Information

Item Value
gene id LOC120544290
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 5092205 ~ 5093149 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777926.1
ATGGAGAACCAGACATTAAACGAGGACATCCTGCTCCTGGAGGGGTTAAACATCTCCCCCCAGTCCAACATTCCTGctttcatcctcctcctcctcatctacGTCTTTGCATTGGTGTCCAACATCAGTTTGGTCACGGTGATCTTCACAAGCAGGAGCCTCCATCAGCCCATGTATCTGCTCTTCTGCAACATGAGCATCAATGACATTTTTGGGGCGACGATTGTCACGCCGCATGTACTCCGAgatattttcattccacattcAGAGCGGTACATTCGTTACGTCCACTGCGCGGTCCAGGCCTTCTGCGTTCACCTCTACGCATCCACCACTCATACTGTTCTTATTATCATGGCTTTCGATCGCTACATGGCCATCTGCAACCCGCTACGATATGCTTCCGTCATGACCAACGGGATGGTGGTGAAGCTGTCTGTGTCAGCGTGGGCGGTGTCTTTCTTGAGTGTGTCGATACTCGTGGGCCTCAGCGTCCGTTTGTCGCGCTGCAGGCGGGTTATACCCAACCCGTTCTGCGACAACGCCTCCTTGTTCAACCTCTCCTGTGAAAACGTTACTGTGAACAACATCGTCGGCATCGGCTACACGGTGCTCCTGCTCGGCTTTTCCGTCTGCTGCGTCTCGATCACCTACCTGAATATTGCGGCGGTGTGTGTGCGTAGTAAGAACAAAGCTTTGAACAGCAAAGCGCTGCAGACCTGTTCCACCCACCTGGCCGTGTACGTCTTCCTGCTGGTGTCAGCCGCCGTCATCATCGCCCTGCACCGATTCCCTCGGACGGCGGACTACAGGAAAGTGGTTTCGGTGTTATGTGAAGCGACTCTGCCGGCGTTCAACGCCGTTATCTACGGGCTGCAAATTAAAGAGATCAAGCAGAGGATCATCACTTTGTTTCACAACATTAAAGGGGCTGGAAAGAAATGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050911 detection of chemical stimulus involved in sensory perception of smell biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777926.1 True 945 mRNA 0.53 1 5092205 5093149

Neighbor

gene id symbol gene type direction distance location
LOC120544289 NA coding downstream 8751 5082510 ~ 5083454 (-)
LOC120544286 NA coding downstream 17514 5073756 ~ 5074691 (-)
LOC120544284 NA coding downstream 29220 5062035 ~ 5062985 (-)
LOC120544283 NA coding downstream 37888 5053355 ~ 5054317 (-)
LOC120544239 LOC104943257 coding downstream 110839 4980419 ~ 4981366 (-)
LOC120544291 NA coding upstream 7399 5100548 ~ 5101483 (-)
LOC120543536 LOC104931089,LOC104947899 coding upstream 69856 5163005 ~ 5163949 (-)
LOC120544301 LOC104947899,LOC104931089 coding upstream 75922 5169071 ~ 5170024 (-)
LOC120544302 LOC104931089,LOC104947899 coding upstream 80165 5173314 ~ 5174267 (-)
LOC120544303 NA coding upstream 92854 5186003 ~ 5189027 (-)
G163450 NA non-coding downstream 148814 4943176 ~ 4943391 (-)
G163447 NA non-coding downstream 189888 4902063 ~ 4902317 (-)
G163444 NA non-coding downstream 202364 4889635 ~ 4889841 (-)
G163423 NA non-coding downstream 277834 4806490 ~ 4814371 (-)
trnad-guc_15 NA non-coding downstream 288564 4803570 ~ 4803641 (-)
G163456 NA non-coding upstream 62688 5155837 ~ 5156159 (-)
G163460 NA non-coding upstream 103512 5196661 ~ 5197174 (-)
G163517 NA non-coding upstream 114346 5207495 ~ 5208147 (-)
G163527 NA non-coding upstream 138641 5231790 ~ 5232680 (-)
G163535 NA non-coding upstream 171188 5264337 ~ 5266415 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 270333 4281773 ~ 4821872 (-)
G163315 NA other downstream 271706 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 341775 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 397589 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 598854 4491005 ~ 4493351 (-)
G163767 NA other upstream 2163989 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 2237765 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 2768304 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 3253679 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 3275346 8368495 ~ 8380575 (-)

Expression


Co-expression Network