LOC120544310


Basic Information

Item Value
gene id LOC120544310
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 8786755 ~ 8788439 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777955.1
ATGAAGGGCACAGGGAGAGGTGAGGGCCCTTTGTCTTGTGCAGAAAACCAGCCCTCTATCACCAGGCAGCAAGAACGAAGGGATGTGTACTCTTTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGGCGAgagctctttgtcttcctcttctgAAGATGATGAGCCTTCTCCCACCAGGCAGCGAGTACGAAGGTTTGAGAGCccttcttcttcatcctccaAAGACAAGCAGCCTTCTACTCCAAGGCGGAAGCAAGCATGGAGGGGTGAGAGCCCTTCATCGTCATCTTCTGAAGATGACCAGCGTTGTACCACCAGGCTGCGAGTACGAAGGTTTGAGAGCCCTTCCTTTTTATCCTCTGAAGGCAAGCAGCCTACTACTCGGAAGCGGCAGCAAGCATGGAGGGGTGAGAGCCCTTCGTCGTCATCTTCTGAGGATGACCAGCGTTCTACCTTAAGGCTGCAAGTACGAAGGGATGTGAGCTCTCTGTTCATCGTGGGCACCAAACCTTCTGCCATCATGAAGGAGAGCAGGCAAAGGGAAGAgagctctttgtcttcctcttctgAAGAGGATGAGCCTTCTACCACCAGGCAGCGAGTACGAAGGTTTGAGAGCCCGTCCTCTTCATCCTCCGAAGACAAGCACCCTACTACTCCAAGGCGGCAGCAAGCATGGAGAGGTGAGAGCTCTTCGTCGTCATCTTCTGAAGATGACCAGCGTTGTACCACCAGGCTGCGAGTACGAAGGGATGTGAGCTCTTTGTTCTTCGTAGGCACAAACATGAAGGAGCGCAGGCGAAAGGGTGAGAGCCCTTTGTCTTGTGCAGAAAACACGCCCTCTACCACCAGTGCAAGAAAGGAGACGGAGATCATtgaaagagaaaagcagcatttggaggaggagggtttaaaaagagaaagagagaggtgtgaaaagatgaagagaaagaaccaggagaaggagaggaaaatgTTTAGTCCGCGTTCAAGAATGTACATTTGGTGGCTCAGTTGCAAGATAGACAACATTGCCAGGGACATCCAATCGACCTTTGTGGATGAGCGCTACCTCCTGCGTCATGATCCCCTCAGAAATCCAgagaaaatggcagaaaaagaACGGCTGCTTGACCGAGGAGGGAGCTGGTCGGTGTACAAACGCCGAACAAGAATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777955.1 True 1203 mRNA 0.51 2 8786755 8788439

Neighbor

gene id symbol gene type direction distance location
LOC120543578 NA coding upstream 7633 8773824 ~ 8779122 (+)
LOC120543844 NA coding upstream 14644 8746864 ~ 8772111 (+)
trnay-gua_52 NA coding upstream 35642 8751028 ~ 8751113 (+)
ap2b1 ap2b1,LOC103360248 coding upstream 40798 8721039 ~ 8745957 (+)
mks1 mks1 coding upstream 67516 8711261 ~ 8719239 (+)
styxl1 styxl1 coding downstream 16353 8804792 ~ 8814293 (+)
tmem120a LOC104921110,LOC103360253 coding downstream 27264 8815703 ~ 8824512 (+)
mcama NA coding downstream 68674 8857113 ~ 8911648 (+)
lrwd1 LOC107098205,LOC104945841 coding downstream 159976 8948415 ~ 8962917 (+)
htr3b htr3b coding downstream 256826 9045265 ~ 9054135 (+)
G164163 NA non-coding upstream 87782 8698232 ~ 8698973 (+)
G164162 NA non-coding upstream 89877 8696445 ~ 8696878 (+)
G164136 NA non-coding upstream 149710 8636831 ~ 8637045 (+)
G164135 NA non-coding upstream 152447 8634060 ~ 8634308 (+)
G164115 NA non-coding upstream 191334 8595130 ~ 8595421 (+)
G164208 NA non-coding downstream 15445 8803884 ~ 8804190 (+)
LOC120544514 NA non-coding downstream 151374 8939813 ~ 8944602 (+)
G164293 NA non-coding downstream 220285 9008724 ~ 9183840 (+)
G164309 NA non-coding downstream 292050 9080489 ~ 9178209 (+)
G164334 zbtb16 non-coding downstream 444251 9232690 ~ 9233949 (+)
G164156 NA other upstream 104701 8680133 ~ 8682054 (+)
LOC120544397 LOC101484903,LOC104947545,LOC103360243 other upstream 155894 8628410 ~ 8630861 (+)
kcnj6 kcnj9,kcnj6 other upstream 424312 8353458 ~ 8362443 (+)
LOC120575583 LOC101066275 other upstream 491475 8292709 ~ 8295280 (+)
nsd1b nsd1 other upstream 531216 8212479 ~ 8255539 (+)
bckdk bckdk,LOC102785460 other downstream 176921 8965360 ~ 8987592 (+)
G164466 NA other downstream 1419732 10208171 ~ 10208658 (+)
G164531 NA other downstream 1772204 10560643 ~ 10562266 (+)
LOC120544459 cul5 other downstream 1783926 10572365 ~ 10589296 (+)
LOC120543733 myo7a,LOC101463922,LOC102291063 other downstream 1861558 10649997 ~ 10696751 (+)

Expression


Co-expression Network