LOC120544325 (LOC104933051,LOC104966984,LOC100710405)


Basic Information

Item Value
gene id LOC120544325
gene name LOC104933051,LOC104966984,LOC100710405
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 16963959 ~ 16979710 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777975.1
CATCCTGGTCCAGAGCAGAACTACGTGTGATGAGGTGCGCACTCAGCGCGCCGCTCTGCCCGCGCGGACACTGCAGTGTAGGTTACTGTGCCATCGCTGCTGCGGCTGCTCGCTCCCGACACCACGTCCCGCTGCAGACTTCCCGGGTCCGGGTAGAACAGGGAAGCGCTGAAAGCCATGGCCGAGTCCAACCCGCTGCGGGGCTTCCCCCGTCTGCGCCGGGCCGCGACCTCATTTCCAGGAAATCTGCATTTGGTCTTGGTGCTCCACCCCTCCGGCTTGTTAAGCTCTGCCCCCAGTCCGTCTTCCAGCACTGACCTGGGCTTCCGCTTCAGCCAGGATGACTTCCTGTTAAAGATGCCGGTGGTGATGCTGCGCTCAGTTGGTGACCTGCTGCGCTACATCGACGAAAACCACCTGACATCAGACTTCACTGCAAAAGTGGAGTACTGCCAAAGTGACTGGATCGTCCTCCGCACGgccATTGAGACCTTTGCGGTGACAGTGAAGGAGATCGCCCAGCTGCTGCAAGGCTTTGGATCAGAGCTATCTGAGACCGAACTTCCGGATGAAGCTAGTGCCATCGAGTTCCtgctgcactcacacacacaccgataccGACAGATGAAGGACGACATCCGGAGCGTGCTGAAAGAAGGACGGCTGCTGCTGTCGAACCTGGAGACTGTCAAGGCCTCTAAGAGAGatgtagaggaggagagggaactAAAATCAGACATGGACACTGTTCAGAGGCTCCTGACTCAGCTCAGAGACATGGAGGAGGCGTTTGATGGCTTCTTTGAGAAACACCACCTGAAGATGCAGCAGTACCACCAGCTGCTGCATTATGAAATGAGTTTCCAGCAGatggAGGAGGTTCTGGAGAGGATCACTAACCAGGAGATGGACATTGCCTCTGTGGGAACCACGGTGGTGCAGACGGAACAGCTATTGAAGGACCTGGCGATGCTGGACACACACGCTCAgGAGGAGATGGCTCGTGCCCAGGTGGTTATCCTGCATGGCCATCAGTTGGCCACCAACCACCATTACGCCCTGGCACTCATCATCCAACGCTGCAATGAGCTGCGACATCGCTGTGACATCATCACCACTGCCATACGCACCAAGCGGGCCTCCCTTACCCGAGCACGAGACCTGCTGCTCCGCCTTGAAGGGgcccTTCGGTGGTGTGACGAGGGCGCCTATCTTCTGGCGAGCCAGATGGTGGACAAGTTCCAAACCAGAGAGGGAGCGCAGGAGGCACTGCAGTACCTGAGCTTCCACCAGGAGAGGGCGCCGTCCGCACTGAAAAACAGCCAGGACATTCTGAGCCTTGAGTTTGAAGCCATACTCACCCCACAGCTGCAGTCCCAAATTTCTACTGTTACAGAGAAGCTGAACTCGATGCAGTCTATGATTAGAAACAGAGAGCAGTGTCTGAAAAAGTTGGCGGATGTACAAGTCAGACCGATTCAGCTGGTGGCCCCAAGGCCTGAACCCGACCACACTTTGCAGCGCTGCAAGTCACCCCTCTTCTCCCCCAAACATGGTGTAGACTTTAACGTCCTAAATTCCAAGTTCTCCTTTGACCTGCTACCTGGCAAAAGAGCCGCAAGGAGGAACAACAGCCAACGCAAGATTGAGGTAATGCATGATTTCCAAGGCAACTGCAGCTCTCTGTATGGATCCACCACTGAAACAGATTCAGAGGCAGAAGACAATCCAGAGCAGGTCACACGCCATATAATGAAGGAACTGATAGCTACAGAGAGGATCTATGTGGACGAGCTGCTCTCTGTCCTTTTGgGCTACAGGGCAGAAATGGAGGACCCATCCATGTCTAATCTTCTTCCTTCAGCTCTACGCAGCCAGAAGGATGTTCTGTTTGGCAACATGCCAGAGATTTACCAGTTCCACagcagGATCTTCCTCCAGGATCTGCAGGGTTGCCTGGAGACACCAGAGAGGGTGGGGGCTTGCTTCCTGCAACGGaagaagAAGTTCCAGGTGTATGAGCGTTACTGCCAAAACAAGCCTCGCTCTGAGTTGCTATGGAGACAGTGCTCTGATTCGCCCTTTTTTCAGGAGTGCCAGAATAAGCTGGACCACAAGCTGGGTCTGAACTCTTACCTCCTGAAACCAGTCCAACGCCTCACCAAGTACCAGCTGCTACTCAAGGAGCTGTTGAAGCATTGTGAGACATGTCTGTCCCAGGGTGACCTCAGTCAGCTGGGCCGAGTGGTGATGCAGGGAGGCTTCAGCGTGTGGATCAGCCATAAGAGGGCAGCGGTGCGCATGAAGGAGCTGGCCAGGTTCAAACCCATGCAGAGACATCTCTTCCTCTATGACCTCGCCCTGCTCTTCTGCAAACGCAGAGACGATGACACTCACGACAGGACGCCTTTCTACAGCTTCAAATCCTGTCTCAGAATGAGTGCAGTGGGAATCACAGAAAATGTGAAAGGAGATGTGAAGAAATTTGAAATCTGGTACAGTGGCAGAGAAGTAGTGTACATAGTTCAGGCTCCCACACTGGAGGTCAAAGTTGCCTGGCTGACAGAGATTCGAAAAATTCTCACCAACCAGCAGAAAATGCGCCAAGATGAGACTCCTTCTCTTTCAGACAACCCGCCTTCTGACAGTGCATCAGAGATGTGTGTGTCGTGGGGCGGAGCATCGGTGGGAGGCTGCTCAGCGTGTCTCCCTGTTCCTCACAGCTCCTCTGCAACAAACCACTCCCACAGGCTGCGATGGGAGGAGTCAATACACACTAGCCCCGCCCACTCGGAACCCGTGGTTAACTCACCTCAACGCACTTGGCCTGTTCCTGCGCACTCCGGGGCAATCTGTGAGGGCCTGGAGGACTGGGGTGCAGCTACAGACCTCTCCAACCTATCGGACTCAGACGAGGAGGATCAGCCCGCCCCCCTGGTAGCAGGCAGGTACAGGGTCATGGTAGAAAGCAGCATGGCCAGCACGGATGACATCATCTTTAATTGCGGGGATGTCATCCAGCTGCTGCATGAAGAATTGTCGGGACTGTGGATGGTAAAGAATATAAGTCGTGGGGAAGAAGGGCGTGTTCTATCTGAGGACCTGCATAGGATTCTGGGAGAAACATGCTAAGAGCCAATCAGAACAGAGGATAGATGACATACTTCATCAACTTCCTGACCAAAAGGGGGCATCTGACTCTGCCAAGACGTTCAGCAGATCAACAGATTGAAGCACATCAACTGCATATTTAACTACTGTGACACTTTGACCTCAGAAGGCTGTAAACTACAGAATGGACCTCAGACTGTAGCAATACAAAGCACATATGTGGgatctttttatttatgtatctatTCCAGCAGTAATTTAGTAGATTATTTAGACTTGGGGTTGTAACTAAAGACGTTGAACTTTTTTTGGGCCTTTATTCATATGTACAGCATAGACCTTTGTTGATGTCTTCAAGTTTtatcatttctattttcttaTGAAATATGACAGAAATCATGCATATGCCTACTAACATATCATTACTGTCCATGTGCCAAACAGCGCAGCTAATTATTGTGGCTTCTTTTTGTATAACACTGTAAAATAGCTTTACCTTGGGGTGTTATTGTTTGCAATAAATGTAAACCCTCTTTCTTTCATACAGCAACCAGCTACGTCACTAGAGGGTTTGCATGTGATGTTACCGTATGCCAAAATCGACATCGTTACTCCACCTCTTAGTGGCAAAAGCAAACATTCAGCATCTGCTTGATGCATTCACATGACagaagaacaagaaaaaaaacaaggcaaGATCAGACTATTCAGCAATATTCAGTCAAGGTCTCGCCATCCATAGCAGCCATAGTGGGTTTGTTTTGCCACTCAGTGGTGTTGGTTATGGATGTATATGTGAAAATCTCATTGCATACCCATTGGCTTTCAGTGGGGCTGGTTGTTGTAATTCAGTGGTTGTCAGGCAGCTTTGATAAATAAATTGTAGATATTTAAAAAGTGAA

Function

NR:

description
PREDICTED: proto-oncogene DBL-like isoform X1

GO:      GO:0005089,GO:0032319

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777975.1 True 4013 mRNA 0.51 26 16963959 16979710

Neighbor

gene id symbol gene type direction distance location
LOC120544388 NA coding upstream 70503 16890450 ~ 16893456 (+)
trnas-gcu_7 NA coding upstream 84637 16879241 ~ 16879322 (+)
LOC120544386 LOC105417437,LOC106917148 coding upstream 99926 16858015 ~ 16864033 (+)
rab38c LOC104935089,LOC104966993,LOC103375967,LOC100708531 coding upstream 158623 16800599 ~ 16805336 (+)
slc7a3a slc7a3,LOC104966995,LOC106527388,LOC108238988 coding upstream 178863 16770437 ~ 16785096 (+)
LOC120544081 NA coding downstream 131157 17110867 ~ 17121814 (+)
il12bb NA coding downstream 184005 17163715 ~ 17167448 (+)
LOC120543786 rnf145 coding downstream 196731 17176441 ~ 17196281 (+)
LOC120543932 NA coding downstream 484697 17464407 ~ 17467578 (+)
asl asl coding downstream 510302 17490012 ~ 17498266 (+)
G165865 LOC103376153,LOC104933044,LOC106917154,LOC105916235,LOC103138852 non-coding upstream 8679 16948670 ~ 16955280 (+)
G165849 NA non-coding upstream 42717 16917859 ~ 16921242 (+)
LOC120544389 NA non-coding upstream 73623 16885988 ~ 16890336 (+)
G165764 dpp3 non-coding upstream 98299 16864145 ~ 16865660 (+)
G165729 NA non-coding upstream 244692 16700673 ~ 16719267 (+)
G165905 NA non-coding downstream 182223 17161933 ~ 17162448 (+)
G165995 NA non-coding downstream 420899 17400609 ~ 17409951 (+)
G166000 NA non-coding downstream 450531 17430241 ~ 17430648 (+)
G166024 NA non-coding downstream 527129 17506839 ~ 17507735 (+)
G166028 LOC104958813,LOC105939289,LOC101064037,LOC102197733 non-coding downstream 531467 17511177 ~ 17514560 (+)
LOC120544384 LOC100708800,LOC102793722,LOC102204659,LOC102301331,LOC103375969,LOC101471849,LOC101156840 other upstream 126788 16809886 ~ 16837171 (+)
LOC120544324 NA other upstream 209670 16736664 ~ 16754289 (+)
G165702 NA other upstream 337613 16585142 ~ 16626346 (+)
G165556 yipf5,LOC102777143 other upstream 1005824 15956480 ~ 15958135 (+)
gabra6b NA other upstream 2062956 14862661 ~ 14901003 (+)
fgf13b LOC104966980,LOC101465170,LOC103376159,LOC100710934,LOC108238960,LOC103138886,LOC103475676,LOC107084161,LOC106524025 other downstream 16048 16995758 ~ 17020416 (+)
ubtd2 ubtd2,LOC102788971,LOC100712015 other downstream 165766 17145476 ~ 17160145 (+)
LOC120544493 LOC103370065,LOC101073234,LOC102787924,LOC100696184 other downstream 218987 17198697 ~ 17285342 (+)
LOC120544326 bod1,LOC103369971,LOC101484775,LOC100697254,LOC102215513,LOC102291330,LOC102786418,LOC105939389 other downstream 363070 17342780 ~ 17362284 (+)
G165984 tcerg1,LOC102783943 other downstream 369856 17349566 ~ 17490688 (+)

Expression


Co-expression Network