ppp2cab (ppp2ca,LOC107085894)


Basic Information

Item Value
gene id ppp2cab
gene name ppp2ca,LOC107085894
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 13144933 ~ 13155644 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778196.1
TGCGGAGAGTAAATTCCAGGGTGGATCATCATGGGTGGATCACCAACTGACGTCTCTATTCAGTTTTCAGTCAAATCATAGCAATCTGGCGGACAGAGCAGATACATGCGTCTACGAACAAGAGACATGCTAGCACCTTCTTTGATGCTCTTATAAGCTCCGGAAAATACTAGAACATCTGTGGGACGTCTTCTAACCGAAATTAGATAACGCGTCGGCAAACGAACACCccgaaaacacacaaaaatggacGAAAAGCCGTTTACGAAAGAACTTGATCAGTGGATCGAGCAGCTTAACGAATGCAAACAGCTGACGGAGGGACAGGTGAAAACATTGTGTGAAAAGgcaAAGGAGATACTGACCAAGGAATCAAACGTTCAGGAGGTGAGATGTCCGGTAACAGTGTGTGGCGACGTGCACGGCCAGTTCCACGACCTCATGGAACTGTTCAAGATCGGAGGGAAATCTCCAGACACAAACTATTTGTTCATGGGAGACTACGTTGACAGAGGGTACTACTCCGTAGAAACCGTTTCTTTACTAGTATCGCTTAAGGTGCGCTACCGGGAGCGCATCACAATCCTCAGAGGGAACCACGAGAGCAGACAGATCACACAAGTTTACGGCTTCTATGATGAATGCCTAAGAAAATATGGCAACGCCAACGTTTGGAAGTACTTCACCGACCTGTTTGATTATCTCCCCCTCACTGCCTTGGTAGACTCTCAGATATTCTGCCTTCATGGAGGCCTGTCACCGTCCATAGATACTTTGGATCACATCAGAGCACTGGACCGTTTGCAGGAAGTGCCACATGAGGGTCCCATGTGTGACCTGCTGTGGTCGGACCCTGACGACCGCGGTGGCTGGGGCATCTCCCCTCGAGGAGCCGGCTACACTTTCGGCCAGGACATCTCTGAGACTTTCAACCACGCCAACCGCCTCACGCTGGTGTCCCGTGCCCACCAGCTGGTTATGGAGGGTTACAACTGGTGCCATGAGAGGAATGTGGTGACAATATTTAGTGCTCCCAACTACTGCTACCGCTGTGGCAACCAGGCAGCTATCATGGAACTAGACGACACCCTCAAATACTCATTTTTGCAGTTTGATCCTGCGCCTCGCAGAGGGGAGCCTCATGTCACTCGCCGCACCCCAGATTACTTCCTGTAAattctgacctttgacccttgtACAGTCAGGCCCAGTATTGCCATGATGTATGATATTCAACCGATAACAACATGAATGAGAAAAGGGAGGGTGGGAGACTGGGGGGGCTACACAGCAGTGCACATTGTATATCCACACAAAGACCTATTTAagcatttagaaaaaaagaaatgtctgaGTGTCTTTTGAATTAACCAAAAGGTGTGTGCCATATGTATAACGATATTCATTGCTGAGGACTTGTATTGAAAATCTCCCCCACTATGTAAAACAGTGATGTTTAAATTCCTCCTCCTGTTCCTGGTGCAGCTGGACCGAATGCACCAAGGTCAAGATGAAAATTTGCTACGTCAAATGCGGCTGTTTGAACTCTACATGCCATGGCTTATATTTAGGAGATCTGAATGTGATCTGTTTGCACTTTTGTAAATCTAAACAAATGTAACATATGTGAAAAGAAGAATATTATTTCACACTACagatgctttttctttttcttttttttctttaaaaaaaaattacaaataaagCCCCCAACAGGCAAGTTTTACACAAGGTTTCTTTGCCCTGGGTAACTTTTTAAGGAAAGCCCTTCCTATGCAGTCACACAACTGAGCTTGGTGTATATAATAGACAGATAATGGAGTGTTCATCCACATCAACTCACTGACTCCCGTTGAATTACCAGAGTCTGTATTAACCAAACCATTTCAATAATAAAGATGAAGATGGCTCCTTGA

Function

symbol description
ppp2ca Enables protein heterodimerization activity and protein serine/threonine phosphatase activity. Involved in negative regulation of epithelial to mesenchymal transition; peptidyl-threonine dephosphorylation; and positive regulation of protein serine/threonine kinase activity. Located in membrane raft. Part of protein phosphatase type 2A complex. Biomarker of Parkinson's disease; congestive heart failure; and prostate cancer.

NR:

description
PREDICTED: serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0004721 phosphoprotein phosphatase activity molecular_function

KEGG:

id description
K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778196.1 True 1916 mRNA 0.46 7 13144933 13155644

Neighbor

gene id symbol gene type direction distance location
cdkn2aipnl cdkn2aipnl,LOC102794961 coding upstream 28029 13114883 ~ 13116904 (+)
sar1b sar1b,LOC107713617,LOC107603246,LOC102795722 coding upstream 270894 12865247 ~ 12874039 (+)
LOC120575626 NA coding upstream 344921 12797997 ~ 12800012 (+)
pitx1 pitx1,LOC100690583 coding upstream 384657 12747967 ~ 12760276 (+)
LOC120544088 LOC102798793,LOC104924243,LOC101475378,LOC100699679,LOC101078553,LOC103363335,LOC108238083,LOC107386699 coding upstream 512046 12611856 ~ 12632887 (+)
skp1 skp1,Skp1,SKP1 coding downstream 1438 13157082 ~ 13162735 (+)
vdac1 vdac1 coding downstream 126251 13281895 ~ 13293010 (+)
c16h5orf15 kct2,clg07h5orf15,LOC106603818,LOC106911376 coding downstream 138646 13294290 ~ 13303379 (+)
fstl4 fstl4,LOC103365844 coding downstream 343434 13499078 ~ 13742749 (+)
irf1b NA coding downstream 966098 14121742 ~ 14126439 (+)
G165076 NA non-coding upstream 20880 13079779 ~ 13124053 (+)
G165078 NA non-coding upstream 23091 13120809 ~ 13121842 (+)
G165062 NA non-coding upstream 214659 12918433 ~ 12930274 (+)
G165026 NA non-coding upstream 257238 12830761 ~ 12887695 (+)
G165037 NA non-coding upstream 336840 12807784 ~ 12808093 (+)
LOC120544692 NA non-coding downstream 151728 13307372 ~ 13387090 (+)
G165161 NA non-coding downstream 315374 13471018 ~ 13471231 (+)
G165162 NA non-coding downstream 320357 13476001 ~ 13476222 (+)
G165179 NA non-coding downstream 594220 13749864 ~ 13750173 (+)
G165180 NA non-coding downstream 637212 13792856 ~ 13793465 (+)
G165043 ddx46,LOC102797024 other upstream 324224 12817231 ~ 12820709 (+)
G165033 NA other upstream 347633 12794560 ~ 12797300 (+)
lcp2a lcp2 other upstream 676619 12450762 ~ 12468314 (+)
LOC120575591 LOC104924162 other upstream 797881 12329957 ~ 12347052 (+)
LOC120544113 LOC104924140 other upstream 833064 12294593 ~ 12311869 (+)
gabra6b NA other downstream 1707017 14862661 ~ 14901003 (+)
G165556 yipf5,LOC102777143 other downstream 2800836 15956480 ~ 15958135 (+)
G165702 NA other downstream 3429498 16585142 ~ 16626346 (+)
LOC120544324 NA other downstream 3581020 16736664 ~ 16754289 (+)
LOC120544384 LOC100708800,LOC102793722,LOC102204659,LOC102301331,LOC103375969,LOC101471849,LOC101156840 other downstream 3654242 16809886 ~ 16837171 (+)

Expression


Co-expression Network