XLOC_004888


Basic Information

Item Value
gene id XLOC_004888
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 36045313 ~ 36049933 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010753
ACCACCTGGAAAAAaactgagaagaaaaaaaacgcCATCGTAGTGGCACCTAGTGAGCTATTAACGGTGTAGCATAGTAAGTTTTCTGGAAACTGCATGTATTTTCTAGAAATTTCTACAATTAATGACGGAGAAATCTACTTTACATCAAGGTTTATTTTCTACaaaatctatctgtctatctgtctatctattgtGATTTGAGGCCTCAATGCGCTGCATAACTGCTCTTCCTAAACAGCGGCCTACACAGGCGTCTGTGTTTGTGATACAACGGGAGACTTTTTTCAAAGAGGCAACATCTGATAACATCTGCAGGACCACAGGCTCCCTCTCACGATCGAGAAGAAACAGAGAGAgctagaaag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010753 True 368 lncRNA 0.41 2 36045313 36049933

Neighbor

gene id symbol gene type direction distance location
XLOC_004887 NA coding upstream 60932 35981916 ~ 35984381 (+)
XLOC_004886 NA coding upstream 119901 35921177 ~ 35925412 (+)
XLOC_004885 NA coding upstream 202942 35838288 ~ 35842371 (+)
XLOC_004884 NA coding upstream 338365 35705133 ~ 35706948 (+)
XLOC_004883 baiap2b coding upstream 356074 35654749 ~ 35689239 (+)
XLOC_004889 btbd17a coding downstream 42285 36092218 ~ 36107156 (+)
XLOC_004890 map2k6 coding downstream 59138 36109071 ~ 36161256 (+)
XLOC_004891 NA coding downstream 224689 36274622 ~ 36277231 (+)
XLOC_004892 NA coding downstream 305342 36355275 ~ 36376878 (+)
XLOC_004893 galr2a coding downstream 340489 36390422 ~ 36396584 (+)
XLOC_004881 FO681473.1 non-coding upstream 433499 35611698 ~ 35611814 (+)
XLOC_004896 NA non-coding downstream 486830 36536763 ~ 36538616 (+)
XLOC_004897 NA non-coding downstream 595833 36645766 ~ 36749613 (+)
XLOC_004898 NA non-coding downstream 742531 36792464 ~ 36796815 (+)

Expression


Co-expression Network