mcama


Basic Information

Item Value
gene id mcama
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 8857113 ~ 8911648 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778306.1
ccccctccttcccctcctTCTCCGCCTCTCCTCAGTCTCCGGGCTGTTGGCTTCAACTTCTCGGCTACACACCACTTCACATTATTTCGGAGTGGATACGACGAGCAGCTTTTCCAAGAACATGGCTCGCATGCACCGAACACTTCTACCGCTCTTTCTTCACATATGCCTCCTCAACTGGAGCGcgTGGGCCAAGGTGGAGCTGACTATGCATGAGGGTGTTGAGGTGTACCTGGGTGACTCGGCTCAGATCCCCTGCCAGTACAGCTTCACTGACGCCGACAACAAGCCCAGCTTTTTCATGATCCAGTGGTTTGTGAGAGCTTTCCGGCAGCCAGCCAGCCCACGCGTACGGATCTTCTACGGTGATGACAAGCAGCAGATGGTGGACAACAACACGGACTACAGCGGTCGCATCCAGGTGACTTCAGACCAGCAGGGAACTCAACTCACCATCCAAGATGTCCATCTCAACGATGAGAGGGAATTCTTCTGCCAGGTTAACGGGCTGGTTGCCGGGAGCGCTGAGGGCAAGACCCACCTCCGAGTGTTTGCTCCTCCAGAGGCTCCAGTGATCGAGGGTGTCACTACTGGAATATCTGTGACCAATGAGGTGCCTACCAAGGTTGCATCATGTGAGGCTCGCAACGgctaccctaaacccaacatcACCTGGTACAGGAACAGCATGCCACTGATGTCTACACCAGGATATGTAAACATGTTGATCCTGGTGACCCGGGAGTCCAGTGACTTCTTCTCCGTCCAGAGCACACTGCAGTACAAGGTGGTTAAGGAGGACAAGGATGCCCATTTCTCCTGTGAGGTCAGCTTCTTTGTCCCGGGAGCCATCAGGACAGTTGAGTCCAACAGGGTCAACATCACTGTTCACTaccCCACCACCATGGTGGAGCTGTGGAAGGAGTCGCCCCAGGGCTTGGTCAAAGAGGGAGATACTGTGGAGCTGCGTTGCCAGGGTGATGGCAACCCCCCACCGGTCTTCATTTTCAACCGAGAACAAGAGCTGGATGTGGACTTGGAGAGCAACCACGGCGATGTGTTGATGCTGTCGCCAGTGTCCCGGAAAGACAGCGGCATCTACCAGTGCCGCCCTCTGGACTCTGAGGTCAAAGGAGAAATGCAGCTCACTGTGCACTACTTGGACCCAGCTGTGGTGGTACCTAAAGACTCTGAGGTCATGCTGAAAGGAGAAGATCTGACTGCAACCTGCAATGCTCTGTCCTCCCTGAAAACATCCACTGTCTGGTACAAGgaTGGGAAGCAGCTGGGTAAGGGGAACACATTGCATCTGAAGGATGCCACCTATGAAACAACAGGAGAGTACATATGTGAGGTGACCGTTCCCTCCCTGCCCGCCCTGCACACCAGCGGCTCCGTCCACATCATCGTCCAAGgtggtCCCCAGCTGGTGGGAGTTGAGCAAGAGGTGCAGCTGGAGGAGGCAACAGGCAGGATGGTGAACCTGAGCTGTGAGGTTCAGGGCCATCCGCTGCCCAGCCTCTCCTGGAGCATCGTCGGCAGCCAGAACTGGCAGGAGGTGGTGAACAAGGCAAACGAGCACATTATCCACAGCGTGGTGTCGGTCAAAGTCACCTCGGACACCAGCGCTGTGTGCAACGCTTCCAACGACCTGGGCACTGAAGTCAAGGCTTTCAGCATCAAAGCCATTCCCAGAGTCACTTCAGCTGCTCCCTTCTCTCCTGctGAGGGCAGCGGGGTGATCATCGTGGTGATCATActgtgtctgctgctgctcgcCATCCTCGGCAGCGTTCTCTACTTCCTGCATAAGAAGGGGAAGATCCCCTGTGGACGCTCTGGGAAACAGGAGATCAGCACCAAAGAGAAGGCCACCAAAGATGACATTGTCGTGGAGATGAAGACCAACACAAAGAATGAGGAAGCTGTCCTCCTAAAGGCTGTCAACGGAGACAAGAAGGGCCCTAGTGACCAGTGAAGTCCCTGACGGTTCAGCAGCAGGGAGGACACATGAAGCCAGCAGTCCGTCAGCGTGACCTGAGACCTGCAGGGTAACCCCACCTCACAGTCCGGACATTCCCCCATCATGCTTTGTTCTCAGCAGTATTTAGTAGATTCACACAGGAACACACCACCACATACctgcattacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacatacaggtaTGTATGTACTCGTGTGTATTTTCCTTTTGAATGAATGTTTGCCACCCTGACATTCAGTTCCTCCGTTTGTTTTGTACCGTTTCCTTAAAACTGTTCAGCGTGTGTACGATGGTGTCTCGTGTTGCATcatccaacttttttttttcttttttttttaatgaaagtgtatatattatatatattttgttatttaagatattttggCACTGCGATTTTCAACTGGCGTTAGCGTCTGGGTCATGTGCATGTTGATCCGTGTTCATGGTGTCCAGGCGAGTTTTTGGGACGGGAAATGATGTCAGAGACCAAACGCTTTACTGTTGGTTCACAGTCACAGAGAGAAGGCTTGTCAGTGTGTTTCCTTCACTTTGATTTGTTTTGATTGACACCAGTATTTGCAGAAGTCGATTTTGAAATGTAACCAAAAAATGAGGAATACTGAGGCGTTTCCCCGATGATGGGATGTCTTGTTCGGGTGGGAAAACGAGACGCTAAAGCTTGAGACGCAGAGTAATCCCAACATCTATAAAAGCTGTCAGTCAGACACACTGGCAGCCTTCTTTTGCAAACTGCTGTCAAGCCTTTGTACCGTTTGTAAATAAGTGGTAGTGTACAGATCTGCTAGTGGTGGCCTTGGACTGTTACTGAAGGCGAAAGGGCCAAAGGTTAGTTGGTTAGCTGATGTGCTGTGCCTGTTTTTGAGAATGCATCATACACTGAATTAGGTTTTTTCTTTGGTTtgctctgtgtgttttctttgtttcaaCTGAGAGCTCGTTGGGCCTGAAGAAAGGTTccagtgtttgtgcatgtttgaCGTGTTTACTACAGACGACCCATACAGTACTGCTGACCGCTGTGCAAAGcaggctgctttttttttaccttctagGCAGCCATACGTTTCAGTTTGTTTCTGTACAGTTTGATACGGTGGCCGACAaggggcaaacgcactgcaacttaatAAAACGCATGCACGTTAACAAAAcgtcttcattaatttgacaacgcatgtgcagcatttagcaaacgcgctgcaaatacacacatcacaaccaaatacacaaac
>XM_039778307.1
cccctccttcccctcctTCTCCGCCTCTCCTCAGTCTCCGGGCTGTTGGCTTCAACTTCTCGGCTACACACCACTTCACATTATTTCGGAGTGGATACGACGAGCAGCTTTTCCAAGAACATGGCTCGCATGCACCGAACACTTCTACCGCTCTTTCTTCACATATGCCTCCTCAACTGGAGCGcgTGGGCCAAGGTGGAGCTGACTATGCATGAGGGTGTTGAGGTGTACCTGGGTGACTCGGCTCAGATCCCCTGCCAGTACAGCTTCACTGACGCCGACAACAAGCCCAGCTTTTTCATGATCCAGTGGTTTGTGAGAGCTTTCCGGCAGCCAGCCAGCCCACGCGTACGGATCTTCTACGGTGATGACAAGCAGCAGATGGTGGACAACAACACGGACTACAGCGGTCGCATCCAGGTGACTTCAGACCAGCAGGGAACTCAACTCACCATCCAAGATGTCCATCTCAACGATGAGAGGGAATTCTTCTGCCAGGTTAACGGGCTGGTTGCCGGGAGCGCTGAGGGCAAGACCCACCTCCGAGTGTTTGCTCCTCCAGAGGCTCCAGTGATCGAGGGTGTCACTACTGGAATATCTGTGACCAATGAGGTGCCTACCAAGGTTGCATCATGTGAGGCTCGCAACGgctaccctaaacccaacatcACCTGGTACAGGAACAGCATGCCACTGATGTCTACACCAGGATATGTAAACATGTTGATCCTGGTGACCCGGGAGTCCAGTGACTTCTTCTCCGTCCAGAGCACACTGCAGTACAAGGTGGTTAAGGAGGACAAGGATGCCCATTTCTCCTGTGAGGTCAGCTTCTTTGTCCCGGGAGCCATCAGGACAGTTGAGTCCAACAGGGTCAACATCACTGTTCACTaccCCACCACCATGGTGGAGCTGTGGAAGGAGTCGCCCCAGGGCTTGGTCAAAGAGGGAGATACTGTGGAGCTGCGTTGCCAGGGTGATGGCAACCCCCCACCGGTCTTCATTTTCAACCGAGAACAAGAGCTGGATGTGGACTTGGAGAGCAACCACGGCGATGTGTTGATGCTGTCGCCAGTGTCCCGGAAAGACAGCGGCATCTACCAGTGCCGCCCTCTGGACTCTGAGGTCAAAGGAGAAATGCAGCTCACTGTGCACTACTTGGACCCAGCTGTGGTGGTACCTAAAGACTCTGAGGTCATGCTGAAAGGAGAAGATCTGACTGCAACCTGCAATGCTCTGTCCTCCCTGAAAACATCCACTGTCTGGTACAAGgaTGGGAAGCAGCTGGGTAAGGGGAACACATTGCATCTGAAGGATGCCACCTATGAAACAACAGGAGAGTACATATGTGAGGTGACCGTTCCCTCCCTGCCCGCCCTGCACACCAGCGGCTCCGTCCACATCATCGTCCAAGgtggtCCCCAGCTGGTGGGAGTTGAGCAAGAGGTGCAGCTGGAGGAGGCAACAGGCAGGATGGTGAACCTGAGCTGTGAGGTTCAGGGCCATCCGCTGCCCAGCCTCTCCTGGAGCATCGTCGGCAGCCAGAACTGGCAGGAGGTGGTGAACAAGGCAAACGAGCACATTATCCACAGCGTGGTGTCGGTCAAAGTCACCTCGGACACCAGCGCTGTGTGCAACGCTTCCAACGACCTGGGCACTGAAGTCAAGGCTTTCAGCATCAAAGCCATTCCCAGAGTCACTTCAGCTGCTCCCTTCTCTCCTGctGAGGGCAGCGGGGTGATCATCGTGGTGATCATActgtgtctgctgctgctcgcCATCCTCGGCAGCGTTCTCTACTTCCTGCATAAGAAGGGGAAGATCCCCTGTGGACGCTCTGGGAAACAGGAGATCACCAAAGAGAAGGCCACCAAAGATGACATTGTCGTGGAGATGAAGACCAACACAAAGAATGAGGAAGCTGTCCTCCTAAAGGCTGTCAACGGAGACAAGAAGGGCCCTAGTGACCAGTGAAGTCCCTGACGGTTCAGCAGCAGGGAGGACACATGAAGCCAGCAGTCCGTCAGCGTGACCTGAGACCTGCAGGGTAACCCCACCTCACAGTCCGGACATTCCCCCATCATGCTTTGTTCTCAGCAGTATTTAGTAGATTCACACAGGAACACACCACCACATACctgcattacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacatacaggtaTGTATGTACTCGTGTGTATTTTCCTTTTGAATGAATGTTTGCCACCCTGACATTCAGTTCCTCCGTTTGTTTTGTACCGTTTCCTTAAAACTGTTCAGCGTGTGTACGATGGTGTCTCGTGTTGCATcatccaacttttttttttcttttttttttaatgaaagtgtatatattatatatattttgttatttaagatattttggCACTGCGATTTTCAACTGGCGTTAGCGTCTGGGTCATGTGCATGTTGATCCGTGTTCATGGTGTCCAGGCGAGTTTTTGGGACGGGAAATGATGTCAGAGACCAAACGCTTTACTGTTGGTTCACAGTCACAGAGAGAAGGCTTGTCAGTGTGTTTCCTTCACTTTGATTTGTTTTGATTGACACCAGTATTTGCAGAAGTCGATTTTGAAATGTAACCAAAAAATGAGGAATACTGAGGCGTTTCCCCGATGATGGGATGTCTTGTTCGGGTGGGAAAACGAGACGCTAAAGCTTGAGACGCAGAGTAATCCCAACATCTATAAAAGCTGTCAGTCAGACACACTGGCAGCCTTCTTTTGCAAACTGCTGTCAAGCCTTTGTACCGTTTGTAAATAAGTGGTAGTGTACAGATCTGCTAGTGGTGGCCTTGGACTGTTACTGAAGGCGAAAGGGCCAAAGGTTAGTTGGTTAGCTGATGTGCTGTGCCTGTTTTTGAGAATGCATCATACACTGAATTAGGTTTTTTCTTTGGTTtgctctgtgtgttttctttgtttcaaCTGAGAGCTCGTTGGGCCTGAAGAAAGGTTccagtgtttgtgcatgtttgaCGTGTTTACTACAGACGACCCATACAGTACTGCTGACCGCTGTGCAAAGcaggctgctttttttttaccttctagGCAGCCATACGTTTCAGTTTGTTTCTGTACAGTTTGATACGGTGGCCGACAaggggcaaacgcactgcaacttaatAAAACGCATGCACGTTAACAAAAcgtcttcattaatttgacaacgcatgtgcagcatttagcaaacgcgctgcaaatacacacatcacaaccaaatacacaaa
>XM_039778308.1
CATCATGTTCGCTGATGGATTACCTGCAGACCGAAGcgTGGGCCAAGGTGGAGCTGACTATGCATGAGGGTGTTGAGGTGTACCTGGGTGACTCGGCTCAGATCCCCTGCCAGTACAGCTTCACTGACGCCGACAACAAGCCCAGCTTTTTCATGATCCAGTGGTTTGTGAGAGCTTTCCGGCAGCCAGCCAGCCCACGCGTACGGATCTTCTACGGTGATGACAAGCAGCAGATGGTGGACAACAACACGGACTACAGCGGTCGCATCCAGGTGACTTCAGACCAGCAGGGAACTCAACTCACCATCCAAGATGTCCATCTCAACGATGAGAGGGAATTCTTCTGCCAGGTTAACGGGCTGGTTGCCGGGAGCGCTGAGGGCAAGACCCACCTCCGAGTGTTTGCTCCTCCAGAGGCTCCAGTGATCGAGGGTGTCACTACTGGAATATCTGTGACCAATGAGGTGCCTACCAAGGTTGCATCATGTGAGGCTCGCAACGgctaccctaaacccaacatcACCTGGTACAGGAACAGCATGCCACTGATGTCTACACCAGGATATGTAAACATGTTGATCCTGGTGACCCGGGAGTCCAGTGACTTCTTCTCCGTCCAGAGCACACTGCAGTACAAGGTGGTTAAGGAGGACAAGGATGCCCATTTCTCCTGTGAGGTCAGCTTCTTTGTCCCGGGAGCCATCAGGACAGTTGAGTCCAACAGGGTCAACATCACTGTTCACTaccCCACCACCATGGTGGAGCTGTGGAAGGAGTCGCCCCAGGGCTTGGTCAAAGAGGGAGATACTGTGGAGCTGCGTTGCCAGGGTGATGGCAACCCCCCACCGGTCTTCATTTTCAACCGAGAACAAGAGCTGGATGTGGACTTGGAGAGCAACCACGGCGATGTGTTGATGCTGTCGCCAGTGTCCCGGAAAGACAGCGGCATCTACCAGTGCCGCCCTCTGGACTCTGAGGTCAAAGGAGAAATGCAGCTCACTGTGCACTACTTGGACCCAGCTGTGGTGGTACCTAAAGACTCTGAGGTCATGCTGAAAGGAGAAGATCTGACTGCAACCTGCAATGCTCTGTCCTCCCTGAAAACATCCACTGTCTGGTACAAGgaTGGGAAGCAGCTGGGTAAGGGGAACACATTGCATCTGAAGGATGCCACCTATGAAACAACAGGAGAGTACATATGTGAGGTGACCGTTCCCTCCCTGCCCGCCCTGCACACCAGCGGCTCCGTCCACATCATCGTCCAAGgtggtCCCCAGCTGGTGGGAGTTGAGCAAGAGGTGCAGCTGGAGGAGGCAACAGGCAGGATGGTGAACCTGAGCTGTGAGGTTCAGGGCCATCCGCTGCCCAGCCTCTCCTGGAGCATCGTCGGCAGCCAGAACTGGCAGGAGGTGGTGAACAAGGCAAACGAGCACATTATCCACAGCGTGGTGTCGGTCAAAGTCACCTCGGACACCAGCGCTGTGTGCAACGCTTCCAACGACCTGGGCACTGAAGTCAAGGCTTTCAGCATCAAAGCCATTCCCAGAGTCACTTCAGCTGCTCCCTTCTCTCCTGctGAGGGCAGCGGGGTGATCATCGTGGTGATCATActgtgtctgctgctgctcgcCATCCTCGGCAGCGTTCTCTACTTCCTGCATAAGAAGGGGAAGATCCCCTGTGGACGCTCTGGGAAACAGGAGATCAGCACCAAAGAGAAGGCCACCAAAGATGACATTGTCGTGGAGATGAAGACCAACACAAAGAATGAGGAAGCTGTCCTCCTAAAGGCTGTCAACGGAGACAAGAAGGGCCCTAGTGACCAGTGAAGTCCCTGACGGTTCAGCAGCAGGGAGGACACATGAAGCCAGCAGTCCGTCAGCGTGACCTGAGACCTGCAGGGTAACCCCACCTCACAGTCCGGACATTCCCCCATCATGCTTTGTTCTCAGCAGTATTTAGTAGATTCACACAGGAACACACCACCACATACctgcattacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacatacaggtaTGTATGTACTCGTGTGTATTTTCCTTTTGAATGAATGTTTGCCACCCTGACATTCAGTTCCTCCGTTTGTTTTGTACCGTTTCCTTAAAACTGTTCAGCGTGTGTACGATGGTGTCTCGTGTTGCATcatccaacttttttttttcttttttttttaatgaaagtgtatatattatatatattttgttatttaagatattttggCACTGCGATTTTCAACTGGCGTTAGCGTCTGGGTCATGTGCATGTTGATCCGTGTTCATGGTGTCCAGGCGAGTTTTTGGGACGGGAAATGATGTCAGAGACCAAACGCTTTACTGTTGGTTCACAGTCACAGAGAGAAGGCTTGTCAGTGTGTTTCCTTCACTTTGATTTGTTTTGATTGACACCAGTATTTGCAGAAGTCGATTTTGAAATGTAACCAAAAAATGAGGAATACTGAGGCGTTTCCCCGATGATGGGATGTCTTGTTCGGGTGGGAAAACGAGACGCTAAAGCTTGAGACGCAGAGTAATCCCAACATCTATAAAAGCTGTCAGTCAGACACACTGGCAGCCTTCTTTTGCAAACTGCTGTCAAGCCTTTGTACCGTTTGTAAATAAGTGGTAGTGTACAGATCTGCTAGTGGTGGCCTTGGACTGTTACTGAAGGCGAAAGGGCCAAAGGTTAGTTGGTTAGCTGATGTGCTGTGCCTGTTTTTGAGAATGCATCATACACTGAATTAGGTTTTTTCTTTGGTTtgctctgtgtgttttctttgtttcaaCTGAGAGCTCGTTGGGCCTGAAGAAAGGTTccagtgtttgtgcatgtttgaCGTGTTTACTACAGACGACCCATACAGTACTGCTGACCGCTGTGCAAAGcaggctgctttttttttaccttctagGCAGCCATACGTTTCAGTTTGTTTCTGTACAGTTTGATACGGTGGCCGACAaggggcaaacgcactgcaacttaatAAAACGCATGCACGTTAACAAAAcgtcttcattaatttgacaacgcatgtgcagcatttagcaaacgcgctgcaaatacacacatcacaaccaaatacacaaac

Function

NR:

description
cell surface glycoprotein MUC18-like isoform X1

GO: NA

KEGG:

id description
K06534 MCAM, CD146; melanoma cell adhesion molecule

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778306.1 True 3330 mRNA 0.51 16 8857113 8911648
XM_039778307.1 False 3325 mRNA 0.51 16 8857114 8911647
XM_039778308.1 False 3181 mRNA 0.51 16 8860429 8911648

Neighbor

gene id symbol gene type direction distance location
tmem120a LOC104921110,LOC103360253 coding upstream 32601 8815703 ~ 8824512 (+)
styxl1 styxl1 coding upstream 42820 8804792 ~ 8814293 (+)
LOC120544310 NA coding upstream 68674 8786755 ~ 8788439 (+)
LOC120543578 NA coding upstream 77991 8773824 ~ 8779122 (+)
LOC120543844 NA coding upstream 85002 8746864 ~ 8772111 (+)
lrwd1 LOC107098205,LOC104945841 coding downstream 36767 8948415 ~ 8962917 (+)
htr3b htr3b coding downstream 133617 9045265 ~ 9054135 (+)
htr3a htr3a,LOC106514605,LOC108238041,LOC103395383 coding downstream 146712 9058360 ~ 9070105 (+)
cadm1a cadm1,LOC108238063,LOC107387207 coding downstream 750274 9661922 ~ 10076292 (+)
LOC120544618 sc5d,LOC102788886 coding downstream 1188223 10099871 ~ 10107367 (+)
G164208 NA non-coding upstream 52923 8803884 ~ 8804190 (+)
G164163 NA non-coding upstream 158140 8698232 ~ 8698973 (+)
G164162 NA non-coding upstream 160235 8696445 ~ 8696878 (+)
G164136 NA non-coding upstream 220068 8636831 ~ 8637045 (+)
G164135 NA non-coding upstream 222805 8634060 ~ 8634308 (+)
LOC120544514 NA non-coding downstream 28165 8939813 ~ 8944602 (+)
G164293 NA non-coding downstream 97076 9008724 ~ 9183840 (+)
G164309 NA non-coding downstream 168841 9080489 ~ 9178209 (+)
G164334 zbtb16 non-coding downstream 321042 9232690 ~ 9233949 (+)
G164335 NA non-coding downstream 324832 9236480 ~ 9236971 (+)
G164156 NA other upstream 175059 8680133 ~ 8682054 (+)
LOC120544397 LOC101484903,LOC104947545,LOC103360243 other upstream 226252 8628410 ~ 8630861 (+)
kcnj6 kcnj9,kcnj6 other upstream 494670 8353458 ~ 8362443 (+)
LOC120575583 LOC101066275 other upstream 561833 8292709 ~ 8295280 (+)
nsd1b nsd1 other upstream 601574 8212479 ~ 8255539 (+)
bckdk bckdk,LOC102785460 other downstream 53712 8965360 ~ 8987592 (+)
G164466 NA other downstream 1296523 10208171 ~ 10208658 (+)
G164531 NA other downstream 1648995 10560643 ~ 10562266 (+)
LOC120544459 cul5 other downstream 1660717 10572365 ~ 10589296 (+)
LOC120543733 myo7a,LOC101463922,LOC102291063 other downstream 1738349 10649997 ~ 10696751 (+)

Expression


Co-expression Network