LOC120544511 (LOC103375958)


Basic Information

Item Value
gene id LOC120544511
gene name LOC103375958
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 8918482 ~ 8939789 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778309.1
TTTTGTTCTGCTCTTGAACAGCCTCTGCATGACAAATTATCACAAGTGGTGAGTACAGACACGGCGCAAAACAACGGTTGTTTTGTGGAAAAACGTGTCAAGAATATTGCCTGGTTGTCAATCCTCTACCCCCGGGGCTAACCCCCGGTCGCCGACCGAATTAATGGCCGGAAATCCGAGGAAGGGCGCCAGTCTCATCGGCTTGATGAAGGACGCCTTTCAGCCCCACCAGCAGCCTCTCCAGCCTCACCAACCTGCAGTGGTCGATAAGAAAATGGTGGAGAAATGCTGGAAACTCATGGATAAGGTGGTGCGTTTGTGTCAGAACCCCAAGGTGGCTTTGAAGAACAGTCCCCCCTACATCCTGGACCTGCTGCCAGATACCTACCAGCACCTACGCACCGTTTTGTCCCGATACGAGGGCAAAATGGAGATCCTTGGGGAGAACGAGTATTTCCGCGTGGTCATGGAGAACTTGACCAACAAGACTAAGCAGACCATGAGCCTTTTTAAGGAGGCCAAGGAGAGGATGTACGAGGAGAACTCCCAGCCCAGGCGGAACCTTACCAAGCTGTCTCTGATCTTCAGTCACATGCTAGCAGAGCTAAAAGCCATCTTCCCCAATGGCTTATTTCAGGGAGACAACTTCAGGATCACCAAAGCTGACGCTGCCGAATTTTGGAGGAGGTCATTTGGGGACAAGACCATAGTGCCATGGAGGACATTTCGTCAGGCTCTCCACGAGTTCCACCCCATCAGCTCGGGCTTGGAGGCCATGGCTCTCAAATCCACCATCGACCTCACCTGCAACGACTACATCTCAGTCTTTGAGTTTGACATCTTCACCAGGCTCTTCCAGccaTGGTCGTCTCTTTTAAGGAACTGGAACAGTCTGGCAGTCACACACCCTGGTTACATGGCCTTCCTAACCTACGACGAGGTCAAGGCTCGACTGCACAGGTTCATCCACAAACCTGGCAGCTACATCTTCAGGCTGAGCTGCACTCGGCTGGGCCAGTGGGCAATCGGCTACGTGACAGCCGACGGGAACATCCTGCAGACCATCCCCCATAACAAACCACTCTTCCAAGCCCTCATTGATGGATACAGAGAGGGATTCTATCTGTTCCCAGATGGTCGTACACAGAACCCAGACCTAACAGGGCTGTGTGAACCTTCTCCACAGGACCACATCAAAGTTACTCAGGAGCAGTATGAGCTGTACTGTGAGATGGGCTCCACTTTCCAGCTCTGTAAGATATGTGCAGAGAACGACAAGGATGTGAAGATCGAGCCCTGCAGACACCTGATGTGCACCTCCTGTCTGACTGCCTGGCAGGAGTCGGAGGGTCAAGGCTGCCCCTTTTGCCGCTGTGAAATTAAAGGCACGGAGCCCATCGTGGTGGACCCCTTCCACCCGAAGGCCAGCGGGGCTTCCTTTGCCGGTTTCCAGGGATCCAACAGAGCAGAAGCTGCCGCCAATGAAGAGGATGACGACGATCGCCTGGAGGACCACCTTCTCATGAGCAGGCTGGCCTGCACTAAGgtaGAGCGCCCACCATCTCCAATGTCTCAGCTGCCTCCGGTGCCCCCGCGACTGGACCTCCTTCAGCAGAGACCCTCCAGCTCCCACAGCGCTCAGGCTCAGGGAGCCACAGCCaagATTGCGGCCACTCACAGAGACAAGCCACTACCTCCGCCTCCAGCCCTGAGAGAgctgccccctcctccccctccggAGCGCCCCTCCCTGGTCGGCCAGGACTCCAGATTCCAGAGGAGACCCCTGCCCTCCACCCCAGACCAGCCCGCCTGGGCTTCCAACTACATGGTCCCACGTCCGGCAACCAAGGCCCTGTCGGCCTTGTCCTCCAGCCCCCAGAGCAATGGAACAAGTGCAGAGGGAAGCAAACCCCAAGCAGCTACTAATGCTATCTACTGCCTGACTGCAAGATCTCTGCAAGCATCAGTGGCGTCGAGCGGGGAGAAGCCGCCATCTGACTGCGAGGAGAATGAGTACATGAGTCCCACGTCTCTCCCAGCCTCCGGCGCCTCCTGGGTCGTAACAGGCTCCTTGGTGCCCCCGCCTCCGGCCCAGGCAAACCACCACAATGACACCAGCAGCGAGGCGGATGACATCGACTCCGAGGACCCCCAAGTCTACGAGTCCATGTGTATCATCCAGGCCCAGGCTGGCTCCTCTGAGACGGCACCGGCCTCTGACCTGGacCACCTTCAACATTCAGCTGCTGTGGTTCCCCTGGACATGAAGGAGGAGACCAAGGAGGAGGATATTTATGAGTACGACTGTCCCAGACCGGTCGTCCATCCCGCCCCCACCAGAAGAACCCTGTCAGATATCAGCGGCCCCTCGGTGGCCTTCAGCACTCTCAGCATTGACAGTGAAGTAAACGCCAGTATGTTTGCAGCAGGTGTCGACCCTGAACGCCCCCCCAAACCTCTCCCACGGCGAGCCAACTCGGACCGGCGGCCTCGGCCTGCGAACCGGGAATTTTCTGCAGCATTGCCGGACCTCCCcggtccctcctcctcctcctcctcccctccacctcctccgcCTCCTCTGCCTGCAGTCCCTGAAAGCCAAGCCCTAAACGGGGAGATTGAATGCCTGATGTCCCAGGGCTACTCCATCCAGGACATCCAGAAAGCCCTGATGATCGCCCAGAACAATCTGGAGACGGCCAAGAACATCCTGCGAGAGTTTGTCTCCATCCCCTCCACGACACACATCGCCACATAGTCGCTCCAggcacaccccccccccctctctgtctcgTCTCTGTCTCCAACCTGTGCCATTATTATGGATAGCATTTATAACAAGCACCTTTCCTGCAGGGGCACAAGGACCTGCCAAAAAGGCTTTACTCTGAGGAGTAATGCTGCGTTCACGTCATATCACAAGATGCAGACGAGCGTTCTAGTTTGAAACGCTCCCATCCAAAGTCATTTAGTAACACACGATGAACTAACTGCAACAGGTATTACCGTGGAGTCTTAGTGTGGAAATATATTATTTGGATTCTCTCGGACTACTGTTATACCAATGCAAAGTGTTTGACATTGAAGCCTCCAAATCCTCCTGTTTACTCGTAATCGCCACTTCGAAGAttgagttttgtttttttgcgcGGGCCTCCCTACAACGGAAGTATCCGACGGCCGGGTCGGTTTAAAGGAGCAGCTCGGTCGAGGCAGTACGAGTCCGATATGATCTGAACGCAGCATACGCGGAGGACGGAAGCCTTCGACGCGAGCTCTCTGTAGCCAAGCTTTGACCCTGTTGTACTACGCCGAGGCGCACTCGTTTCCCCTCAGCCTGAGTCCCTTCTGTCATTAAGCTAAGTGTTGAGGCTCCAGCGATCGGTAGCGGGACCCGGCCGTGGGTCGTTGTTTCCTGTGTCCCGCTGCCGCCAGTTGTTCAGTTTGGTGCTTTCTACGGGCGTCTTGGCAAATTTGTGGCGTACGAAAATGTGTAGCGACGCGAGTGAGTTCGGTCCGGGAAACATTAGTGACCAACTCCGTGGCGTGTTTTGCTCGTGCTGATGAATGTGAACGTTGAGTCGCAGTGCAGTATCGCAGGGCTTCGTGTCGTACGCGTGGCGTCGCTGTGGCTCGCTcggttttctgttttttgtttttttttcaatggtaTTTGACAAGTTGAACGTACGAGTCCACATTTCCTCCCAGCTCCCCGGGGTTCAATTATGTTTCTATAACGAAATAACAAGTTTTAATGTTGAAATACTCTCATAACTTGTTGTGCTGTGTGTAGTACTAACAATGGCTGGATTTTCAGAAGTTGAttttgtcgttttaattccacgATTGCCTGCCACCGCCCCCCAGGTGGTCTGACACCGAACGCTGGGGTATCCACTCTAACGCTTCTGTATGCTCTTCTAGTTTCTTACTAATAAGCAAAAAAAGGACTTTAACATGTGCTGTTTAGATTTCCTCTCACATGGTAGTGTGATTTGGCTCAGCATCACATTTGTACCCTAAACAGCCGAGGAATCCTCAGATTGAAGGGATTTACATTGAGCTCTAAAGCAAAAAAGCAGACGGTGGTCCCGTGGACTCAGGTACTCCGTAACACGCCAGGGTTGAATGTAAGGAACCAGCAGATGCTAAAGGACACATGATATATATGATATGATGTTGGCAGTGTTGTGGACAGCCGCcaatgactagggttgggtaccgaaacctacacaaccggtaggaatcggaccagattagaacgcaaatttcggttcctcgtTTCAGTTccacttaaaggtgccctaccataca
>XM_039778310.1
TTTTGTTCTGCTCTTGAACAGCCTCTGCATGACAAATTATCACAAGTGGTGAGTACAGACACGGCGCAAAACAACGGTTGTTTTGTGGAAAAACGTGTCAAGAATATTGCCTGGTTGTCAATCCTCTACCCCCGGGGCTAACCCCCGGTCGCCGACCGAATTAATGGCCGGAAATCCGAGGAAGGGCGCCAGTCTCATCGGCTTGATGAAGGACGCCTTTCAGCCCCACCAGCAGCCTCTCCAGCCTCACCAACCTGCAGTGGTCGATAAGAAAATGGTGGAGAAATGCTGGAAACTCATGGATAAGGTGGTGCGTTTGTGTCAGAACCCCAAGGTGGCTTTGAAGAACAGTCCCCCCTACATCCTGGACCTGCTGCCAGATACCTACCAGCACCTACGCACCGTTTTGTCCCGATACGAGGGCAAAATGGAGATCCTTGGGGAGAACGAGTATTTCCGCGTGGTCATGGAGAACTTGACCAACAAGACTAAGCAGACCATGAGCCTTTTTAAGGAGGCCAAGGAGAGGATGTACGAGGAGAACTCCCAGCCCAGGCGGAACCTTACCAAGCTGTCTCTGATCTTCAGTCACATGCTAGCAGAGCTAAAAGCCATCTTCCCCAATGGCTTATTTCAGGGAGACAACTTCAGGATCACCAAAGCTGACGCTGCCGAATTTTGGAGGAGGTCATTTGGGGACAAGACCATAGTGCCATGGAGGACATTTCGTCAGGCTCTCCACGAGTTCCACCCCATCAGCTCGGGCTTGGAGGCCATGGCTCTCAAATCCACCATCGACCTCACCTGCAACGACTACATCTCAGTCTTTGAGTTTGACATCTTCACCAGGCTCTTCCAGccaTGGTCGTCTCTTTTAAGGAACTGGAACAGTCTGGCAGTCACACACCCTGGTTACATGGCCTTCCTAACCTACGACGAGGTCAAGGCTCGACTGCACAGGTTCATCCACAAACCTGGCAGCTACATCTTCAGGCTGAGCTGCACTCGGCTGGGCCAGTGGGCAATCGGCTACGTGACAGCCGACGGGAACATCCTGCAGACCATCCCCCATAACAAACCACTCTTCCAAGCCCTCATTGATGGATACAGAGAGGGATTCTATCTGTTCCCAGATGGTCGTACACAGAACCCAGACCTAACAGGGCTGTGTGAACCTTCTCCACAGGACCACATCAAAGTTACTCAGGAGCAGTATGAGCTGTACTGTGAGATGGGCTCCACTTTCCAGCTCTGTAAGATATGTGCAGAGAACGACAAGGATGTGAAGATCGAGCCCTGCAGACACCTGATGTGCACCTCCTGTCTGACTGCCTGGCAGGAGTCGGAGGGTCAAGGCTGCCCCTTTTGCCGCTGTGAAATTAAAGGCACGGAGCCCATCGTGGTGGACCCCTTCCACCCGAAGGCCAGCGGGGCTTCCTTTGCCGGTTTCCAGGGATCCAACAGAGCAGAAGCTGCCGCCAATGAAGAGGATGACGACGATCGCCTGGAGGACCACCTTCTCATGAGCAGGCTGGCCTGCACTAAGgtaGAGCGCCCACCATCTCCAATGTCTCAGCTGCCTCCGGTGCCCCCGCGACTGGACCTCCTTCAGCAGAGACCCTCCAGCTCCCACAGCGCTCAGGCTCAGGGAGCCACAGCCaagATTGCGGCCACTCACAGAGACAAGCCACTACCTCCGCCTCCAGCCCTGAGAGAgctgccccctcctccccctccggAGCGCCCCTCCCTGGTCGGCCAGGACTCCAGATTCCAGAGGAGACCCCTGCCCTCCACCCCAGACCAGCCCGCCTGGGCTTCCAACTACATGGTCCCACGTCCGGCAACCAAGGCCCTGTCGGCCTTGTCCTCCAGCCCCCAGAGCAATGGAACAAGTGCAGAGGGAAGCAAACCCCAAGCAGCTACTAATGCTATCTACTGCCTGACTGCAAGATCTCTGCAAGCATCAGTGGCGTCGAGCGGGGAGAAGCCGCCATCTGACTGCGAGGAGAATGAGTACATGAGTCCCACGTCTCTCCCAGCCTCCGGCGCCTCCTGGGTCGTAACAGGCTCCTTGGTGCCCCCGCCTCCGGCCCAGGCAAACCACCACAATGACACCAGCGAGGCGGATGACATCGACTCCGAGGACCCCCAAGTCTACGAGTCCATGTGTATCATCCAGGCCCAGGCTGGCTCCTCTGAGACGGCACCGGCCTCTGACCTGGacCACCTTCAACATTCAGCTGCTGTGGTTCCCCTGGACATGAAGGAGGAGACCAAGGAGGAGGATATTTATGAGTACGACTGTCCCAGACCGGTCGTCCATCCCGCCCCCACCAGAAGAACCCTGTCAGATATCAGCGGCCCCTCGGTGGCCTTCAGCACTCTCAGCATTGACAGTGAAGTAAACGCCAGTATGTTTGCAGCAGGTGTCGACCCTGAACGCCCCCCCAAACCTCTCCCACGGCGAGCCAACTCGGACCGGCGGCCTCGGCCTGCGAACCGGGAATTTTCTGCAGCATTGCCGGACCTCCCcggtccctcctcctcctcctcctcccctccacctcctccgcCTCCTCTGCCTGCAGTCCCTGAAAGCCAAGCCCTAAACGGGGAGATTGAATGCCTGATGTCCCAGGGCTACTCCATCCAGGACATCCAGAAAGCCCTGATGATCGCCCAGAACAATCTGGAGACGGCCAAGAACATCCTGCGAGAGTTTGTCTCCATCCCCTCCACGACACACATCGCCACATAGTCGCTCCAggcacaccccccccccctctctgtctcgTCTCTGTCTCCAACCTGTGCCATTATTATGGATAGCATTTATAACAAGCACCTTTCCTGCAGGGGCACAAGGACCTGCCAAAAAGGCTTTACTCTGAGGAGTAATGCTGCGTTCACGTCATATCACAAGATGCAGACGAGCGTTCTAGTTTGAAACGCTCCCATCCAAAGTCATTTAGTAACACACGATGAACTAACTGCAACAGGTATTACCGTGGAGTCTTAGTGTGGAAATATATTATTTGGATTCTCTCGGACTACTGTTATACCAATGCAAAGTGTTTGACATTGAAGCCTCCAAATCCTCCTGTTTACTCGTAATCGCCACTTCGAAGAttgagttttgtttttttgcgcGGGCCTCCCTACAACGGAAGTATCCGACGGCCGGGTCGGTTTAAAGGAGCAGCTCGGTCGAGGCAGTACGAGTCCGATATGATCTGAACGCAGCATACGCGGAGGACGGAAGCCTTCGACGCGAGCTCTCTGTAGCCAAGCTTTGACCCTGTTGTACTACGCCGAGGCGCACTCGTTTCCCCTCAGCCTGAGTCCCTTCTGTCATTAAGCTAAGTGTTGAGGCTCCAGCGATCGGTAGCGGGACCCGGCCGTGGGTCGTTGTTTCCTGTGTCCCGCTGCCGCCAGTTGTTCAGTTTGGTGCTTTCTACGGGCGTCTTGGCAAATTTGTGGCGTACGAAAATGTGTAGCGACGCGAGTGAGTTCGGTCCGGGAAACATTAGTGACCAACTCCGTGGCGTGTTTTGCTCGTGCTGATGAATGTGAACGTTGAGTCGCAGTGCAGTATCGCAGGGCTTCGTGTCGTACGCGTGGCGTCGCTGTGGCTCGCTcggttttctgttttttgtttttttttcaatggtaTTTGACAAGTTGAACGTACGAGTCCACATTTCCTCCCAGCTCCCCGGGGTTCAATTATGTTTCTATAACGAAATAACAAGTTTTAATGTTGAAATACTCTCATAACTTGTTGTGCTGTGTGTAGTACTAACAATGGCTGGATTTTCAGAAGTTGAttttgtcgttttaattccacgATTGCCTGCCACCGCCCCCCAGGTGGTCTGACACCGAACGCTGGGGTATCCACTCTAACGCTTCTGTATGCTCTTCTAGTTTCTTACTAATAAGCAAAAAAAGGACTTTAACATGTGCTGTTTAGATTTCCTCTCACATGGTAGTGTGATTTGGCTCAGCATCACATTTGTACCCTAAACAGCCGAGGAATCCTCAGATTGAAGGGATTTACATTGAGCTCTAAAGCAAAAAAGCAGACGGTGGTCCCGTGGACTCAGGTACTCCGTAACACGCCAGGGTTGAATGTAAGGAACCAGCAGATGCTAAAGGACACATGATATATATGATATGATGTTGGCAGTGTTGTGGACAGCCGCcaatgactagggttgggtaccgaaacctacacaaccggtaggaatcggaccagattagaacgcaaatttcggttcctcgtTTCAGTTccacttaaaggtgccctaccataca

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase CBL-like isoform X1

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0023051 regulation of signaling biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0005634 nucleus cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0001784 phosphotyrosine residue binding molecular_function
GO:0004842 ubiquitin-protein transferase activity molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K04707 CBL; E3 ubiquitin-protein ligase CBL

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778309.1 True 4323 mRNA 0.54 15 8918482 8939789
XM_039778310.1 False 4320 mRNA 0.54 15 8918482 8939789

Neighbor

gene id symbol gene type direction distance location
LOC120543846 LOC103360252,LOC102202538,LOC101472723,LOC102784315 coding downstream 152916 8757077 ~ 8765566 (-)
trnay-gua_54 NA coding downstream 166119 8752278 ~ 8752363 (-)
trnay-gua_53 NA coding downstream 166570 8751824 ~ 8751912 (-)
zw10 zw10 coding downstream 208404 8698230 ~ 8710078 (-)
LOC120543560 LOC104952473,LOC101069911,LOC105023963 coding downstream 222531 8689379 ~ 8695951 (-)
alkbh4 alkbh4 coding upstream 2319 8942108 ~ 8947527 (-)
orai2 orai2,LOC101071969,LOC103395401,LOC107685638 coding upstream 57087 8996876 ~ 9007783 (-)
usp28 NA coding upstream 69896 9009685 ~ 9043931 (-)
zbtb16a zbtb16 coding upstream 147046 9086835 ~ 9239856 (-)
ncam1a NA coding upstream 337157 9276946 ~ 9546171 (-)
G164243 NA non-coding downstream 88056 8829871 ~ 8830426 (-)
G164196 ap2b1,LOC103395083 non-coding downstream 172326 8739849 ~ 8746156 (-)
G164193 NA non-coding downstream 180979 8735379 ~ 8737503 (-)
G164188 NA non-coding downstream 194186 8721110 ~ 8724296 (-)
G164175 LOC101484903,LOC104947545,LOC103360243 non-coding downstream 287596 8627797 ~ 8630886 (-)
G164278 bckdk non-coding upstream 25620 8965409 ~ 8965767 (-)
G164282 NA non-coding upstream 35890 8975679 ~ 8976225 (-)
G164283 NA non-coding upstream 38961 8978750 ~ 8979021 (-)
G164284 NA non-coding upstream 40895 8980684 ~ 8981386 (-)
G164263 NA non-coding upstream 44522 8984311 ~ 8987576 (-)
G164179 NA other downstream 279321 8637714 ~ 8639161 (-)
trim37 trim37,LOC102780947 other downstream 374979 8512174 ~ 8543503 (-)
smg8 smg8,LOC102779993 other downstream 452683 8451577 ~ 8465799 (-)
rabgef1 rabgef1,LOC102778478 other downstream 537907 8368495 ~ 8380575 (-)
G164022 kctd7,LOC102776841 other downstream 565977 8346828 ~ 8352505 (-)
plekhb1 LOC107387206,LOC100711952 other upstream 1169367 10109156 ~ 10127607 (-)
LOC120543909 NA other upstream 1523422 10463211 ~ 10489164 (-)
elmod1 elmod1 other upstream 1602429 10542218 ~ 10557276 (-)
G164728 NA other upstream 2084252 11024041 ~ 11025991 (-)
G164798 NA other upstream 2907816 11847605 ~ 11850970 (-)

Expression


Co-expression Network