Gene
RNA
| Item | Value |
|---|---|
| gene id | alkbh4 |
| gene name | alkbh4 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053127.1 |
| NCBI id | CM020924.1 |
| chromosome length | 37730433 |
| location | 8942108 ~ 8947527 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| alkbh4 | Predicted to enable actin binding activity; demethylase activity; and oxidoreductase activity. Acts upstream of or within regulation of actomyosin structure organization. Predicted to be active in contractile ring and midbody. Is expressed in blastomere; forebrain; midbrain; oocyte; and otic vesicle. Orthologous to human ALKBH4 (alkB homolog 4, lysine demethylase). |
| description |
|---|
| alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 |
| id | description |
|---|---|
| K10766 | ALKBH4; DNA N6-methyl adenine demethylase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039778311.1 | True | 985 | mRNA | 0.50 | 3 | 8942108 | 8947527 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120544511 | LOC103375958 | coding | downstream | 2319 | 8918482 ~ 8939789 (-) |
| LOC120543846 | LOC103360252,LOC102202538,LOC101472723,LOC102784315 | coding | downstream | 176542 | 8757077 ~ 8765566 (-) |
| trnay-gua_54 | NA | coding | downstream | 189745 | 8752278 ~ 8752363 (-) |
| trnay-gua_53 | NA | coding | downstream | 190196 | 8751824 ~ 8751912 (-) |
| zw10 | zw10 | coding | downstream | 232030 | 8698230 ~ 8710078 (-) |
| orai2 | orai2,LOC101071969,LOC103395401,LOC107685638 | coding | upstream | 49349 | 8996876 ~ 9007783 (-) |
| usp28 | NA | coding | upstream | 62158 | 9009685 ~ 9043931 (-) |
| zbtb16a | zbtb16 | coding | upstream | 139308 | 9086835 ~ 9239856 (-) |
| ncam1a | NA | coding | upstream | 329419 | 9276946 ~ 9546171 (-) |
| LOC120575563 | NA | coding | upstream | 1258764 | 10206291 ~ 10212270 (-) |
| G164267 | NA | non-coding | downstream | 15783 | 8915635 ~ 8926325 (-) |
| G164243 | NA | non-coding | downstream | 111682 | 8829871 ~ 8830426 (-) |
| G164196 | ap2b1,LOC103395083 | non-coding | downstream | 195952 | 8739849 ~ 8746156 (-) |
| G164193 | NA | non-coding | downstream | 204605 | 8735379 ~ 8737503 (-) |
| G164188 | NA | non-coding | downstream | 217812 | 8721110 ~ 8724296 (-) |
| G164278 | bckdk | non-coding | upstream | 17882 | 8965409 ~ 8965767 (-) |
| G164282 | NA | non-coding | upstream | 28152 | 8975679 ~ 8976225 (-) |
| G164283 | NA | non-coding | upstream | 31223 | 8978750 ~ 8979021 (-) |
| G164284 | NA | non-coding | upstream | 33157 | 8980684 ~ 8981386 (-) |
| G164263 | NA | non-coding | upstream | 36784 | 8984311 ~ 8987576 (-) |
| G164179 | NA | other | downstream | 302947 | 8637714 ~ 8639161 (-) |
| trim37 | trim37,LOC102780947 | other | downstream | 398605 | 8512174 ~ 8543503 (-) |
| smg8 | smg8,LOC102779993 | other | downstream | 476309 | 8451577 ~ 8465799 (-) |
| rabgef1 | rabgef1,LOC102778478 | other | downstream | 561533 | 8368495 ~ 8380575 (-) |
| G164022 | kctd7,LOC102776841 | other | downstream | 589603 | 8346828 ~ 8352505 (-) |
| plekhb1 | LOC107387206,LOC100711952 | other | upstream | 1161629 | 10109156 ~ 10127607 (-) |
| LOC120543909 | NA | other | upstream | 1515684 | 10463211 ~ 10489164 (-) |
| elmod1 | elmod1 | other | upstream | 1594691 | 10542218 ~ 10557276 (-) |
| G164728 | NA | other | upstream | 2076514 | 11024041 ~ 11025991 (-) |
| G164798 | NA | other | upstream | 2900078 | 11847605 ~ 11850970 (-) |
