LOC120544706 (slc35f2)


Basic Information

Item Value
gene id LOC120544706
gene name slc35f2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 10560040 ~ 10568349 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778650.1
ATGGAGGGGCATGAagaggagagagtgtgtggGAAATGGAGGGTTGCCTGCGGTTTGAACAGTTATAACTTGAGGGATGTCTTCACATGGCGTCTGCTGAAGACCATTATCATGGGGCAGGTCTTGTCCCTGCTGATCTGTGGAACAGCAGTGAGCTGTCAGTACCTGGCCGATGCCAAGGTGGAGACTCCCATGCTGCAGAGCTTCCTCAACTACGTCCTGCTGCTGCTTGTCTATACAACCATCCTCTGCACCCGCAAAGGTGACAGGAACCTCCTACAAATTCTAAAAACCAAGTGGTGGAAGTATTTGGTGATGGGTCTGGCAGATGTGGAGGCAAACTATGCGGTTGTGAAGGCCTACCAGTTCACCACCCTGACAAGTATACAGCTGCTGGACTGCTTTGTGATCCCTGTGCTGATGGTGCTTTCCTGGTTCTTCCTGAAGACTCGCTACAGGCTGCTCCACTTTGTAGCCGTGACGGTGTGCTTGTTTGGGGTGGGAGCCATGGTGGGAGCTGACATCCTGGCTGAAAGAGACCAGGGATCCACCAGTCATGTGGTGCTGGGAGATGGTTTGGTCCTGCTCAGTGCTGCCCTCTATGCTGTATCCAATGTGTGCCAAGAGCACACAGTGAAGAACTTGACCCGGGTCGAATTCCTGGGCATGATGGGCCTCTTTGGGACCCTCATCAGTGGCATACAGCTAGCTGTACTGGAAACCCGTGCAGTAGCGGCAATAACGTGGAACTGTCACATTTCCATGCTGTTTGCAGTCTACGCCCTGTGTATGTTCGCGCTCTACAGCTTCATGCCTGTAGTGGTGGAGATGACCAGCGCCACCGCAGTCAACCTCTCTCTGCTCACCGCCGACCTCTTCAGCCTCTTCTGTGGCATCTTCCTCTTCCACTACACATTTTCACCCCTGTACATCATCTCGTTTGTCGTCATCACTGTGGGTTTTGTCATGTTCAACGCCCTTCCCTCGTACTCGGCGTTACCGGAGTCCATCTCCAGTGAGGACGACCCCGCCGAGGCGTTTGCTGACCTCACAGCTGAGAGCCCCTCAGACCGTTTACTGTCCGCAGGCAAAGACAGTCAGGGAGCGGAGACACTCACTGCTGTGGCTGCACTGTGACTGAAGCTGACTGAAGACAGAGGGAGTTGGCTAAAAGCTGATAGACTGCACCGCTCAGGTGTGTTTATCCTCCAACATAGGTAACTTTGAAGAGGACTCTCCGTTTTAACTTTGACATTGTTACAGAAGTACATTTTTTCTTGTACTGGGCTGGAAAGTTTACTTGTTTTTGGTATTTTGCATTTTCATTATCAAGGAAAATGCAGTGGGTACCGTGTGACCTCTCCATTGCTTGTGGTAGTTAACAGTTTACATTGACACATTTTTCATTCCTATTTTTATGTTAACgtcatttaaaaagaagaaCACATTTGTTAACAGTGATCGAATATCCGATGACAAACACAAAGAATGCGCTGCTGTTTATTGTGCCAAAACTGATGTTACTTCTTTTCtcctattttctttaaaaaaattaatatatttgatattttacaaaataccgGAGTCACCACTGCATGATGTAATGTTTTGAATTCGAACACAATCACAAAGTTGTATTTGACATTTGTTGCCTTTGGTGCTGAATTCTCATTTGGTAATCAAATCTACTGTAAATCACTGGGCTTTCTTTGCCTTATGTAAAGCTTGGGAGCGTGCAGCAGgagttttacttttttactattaaatacatttttattttctcttaggTCTGCATCATTTTTTACAAACGGACAGGACGTTACATGGGGGCGTGGCAGTATCGACGATTCCATTTTTGTATTCGATATTCAACATTGTGGCTTAATTTCGataaattttgatttaaaatcaaaatccTGACACCCTTAGTAAGTATGTAACAAGTAATGATTGTATTATTCTACCTGTTAAAGGAACTACACAGTACTACCagggtgtactgtatgtacaacaGGACATTATAACGTTACACAGATATGATTTTGCATGAGATACAACAAAGTATATTTGGCTATTTATTAAACATAGGCAGAGCGAGGATCCTCAAATGACATTTGGACAAAATTATCTTGAGACAAGTTCCACTTACTATTTTCTTCCACAGCTTTAAACAGCATGTTGGTCTTCATCAGTGGATGGAGTAAATTCTATCCACTCATTAAGGCTGGGTTTGGCGCTGCCGGTCCAGCATCCTTTGCATCGGGCCTGTTTTGTGTGCTTTTGTTGCAGGCCCTTACCTCCCCAGATGTGCTCTCTGTACCTTTCACAACACATTAAAAAGATTATACTCA

Function

symbol description
slc35f2 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC35F2 (solute carrier family 35 member F2).

NR:

description
PREDICTED: solute carrier family 35 member F2

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15287 SLC35F1_2; solute carrier family 35, member F1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778650.1 True 2351 mRNA 0.45 8 10560040 10568349

Neighbor

gene id symbol gene type direction distance location
LOC120544314 NA coding downstream 46319 10512542 ~ 10513721 (-)
LOC120543908 LOC103363285,LOC103395367,LOC100690133 coding downstream 114335 10327909 ~ 10445705 (-)
LOC120575563 NA coding downstream 347770 10206291 ~ 10212270 (-)
ncam1a NA coding downstream 1013869 9276946 ~ 9546171 (-)
zbtb16a zbtb16 coding downstream 1320184 9086835 ~ 9239856 (-)
ompb omp,LOC104919181,LOC103395359 coding upstream 50408 10618757 ~ 10619504 (-)
LOC120543735 LOC104919183,LOC103357773 coding upstream 128677 10697026 ~ 10716079 (-)
rsf1b.1 LOC106962404,LOC103145544,LOC103131284 coding upstream 156990 10725339 ~ 10745340 (-)
LOC120543827 LOC103357770 coding upstream 181103 10749452 ~ 10778550 (-)
vps37d vps37d,LOC103357766,LOC100712407,LOC108243620,LOC101486403,LOC102312367 coding upstream 247154 10815503 ~ 10839874 (-)
G164520 NA non-coding downstream 78709 10481108 ~ 10481331 (-)
G164497 LOC100689869,LOC103354810,LOC104919175 non-coding downstream 268237 10286296 ~ 10291803 (-)
G164499 LOC103354813,LOC104919172,LOC107387201,LOC100712488 non-coding downstream 305062 10245812 ~ 10254978 (-)
G164463 NA non-coding downstream 360146 10199006 ~ 10199894 (-)
G164434 NA non-coding downstream 404279 10155411 ~ 10155761 (-)
G164562 NA non-coding upstream 65253 10633602 ~ 10633802 (-)
G164563 NA non-coding upstream 66667 10635016 ~ 10635238 (-)
G164564 NA non-coding upstream 73223 10641572 ~ 10645819 (-)
G164605 LOC105011052,LOC106603713,LOC108248158 non-coding upstream 89467 10657816 ~ 10659560 (-)
G164616 NA non-coding upstream 179002 10747351 ~ 10747848 (-)
elmod1 elmod1 other downstream 2764 10542218 ~ 10557276 (-)
LOC120543909 NA other downstream 70876 10463211 ~ 10489164 (-)
plekhb1 LOC107387206,LOC100711952 other downstream 432433 10109156 ~ 10127607 (-)
G164179 NA other downstream 1920879 8637714 ~ 8639161 (-)
trim37 trim37,LOC102780947 other downstream 2016537 8512174 ~ 8543503 (-)
G164728 NA other upstream 455692 11024041 ~ 11025991 (-)
G164798 NA other upstream 1279256 11847605 ~ 11850970 (-)
pof1b pof1b other upstream 1693326 12261675 ~ 12293365 (-)
fam53c LOC101064484,LOC106511557,LOC103354649,LOC107090569,LOC102206536,LOC102303322 other upstream 1854825 12423174 ~ 12432292 (-)
sec24a NA other upstream 2262387 12830736 ~ 12864464 (-)

Expression


Co-expression Network