zgc:158291 (zgc:158291,LOC107387148,LOC104965395,LOC101076515,LOC103395138,LOC107697335,LOC107675183,LOC107587290,LOC105901510)


Basic Information

Item Value
gene id zgc:158291
gene name zgc:158291,LOC107387148,LOC104965395,LOC101076515,LOC103395138,LOC107697335,LOC107675183,LOC107587290,LOC105901510
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 12103785 ~ 12108468 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826433.1
GGCGAAAAGGAGACAGGAGACCCGCAGGAGCCCAGGAGTTACCTCTCcttctctgtttctgtttttttaagcGAACCTGACTGCATCTGCGACCCCGATCACGAACCACCTTTTATTCAAAGCGTCTGCGTCTGGCAGGTATTTTTCTTTACCGAGGCTTTTCTTTTTAGAAATTCTCCAAACACGGAGCTAAACGAGGAAGACTTGAAACGACCCTCACTCAGTTCTGCAATCATGATGTCGATGAACAGTAAGCAGCCTTTCAGTATGCACCCCATACTCCACGAACCCAAATACGCTCCTCTGCACTCCAGCTCGGAGGCCATCCGAAGGGCCTGCCTGCCCACACCATCGCTTCAGGGCAACATCTTCGCCGGTTTTGATGAGAGCTTGCTGCAGAGAGCCGAGGCTCTGGCCGCGGTGGACATCGTGGCCCAGAAGAGCCATCCGTTCAAACCAGACGCCACCTACCACACCATGACCACCATGACCAGCATGGCCTgcaccccgacctcctcctcCGCGCACCTGCACCACCCGTCGGTGCTCACCTCCCACCACCACCCGGTGCACCACCAGTCGGCGCAGGGCCTGGACGGCGACCTGCTGGACCACCTAACACCGGGCATCTCCCTGGGAGGCATGGCCGGCTCGGACGTCTGCTCCACGGCCTCGCACACCGCCCACGCCGCCCACATGTCGGCCATCAACCACATgcagcaccaccaccaccaccagcagtcCATGAACATGCACCCGCACGCGCAGCTGTCCCACGGCTCCCTGGGGTCCGCCGGCTTAGACTCGGAGCCCGATCCCCGGGAGCTGGAGTCGTTCGCTGAGAGGTTCAAACAAAGGCGAATCAAACTCGGGGTGACACAAGCGGACGTGGGCTCGGCCCTGGCCAACCTTAAGATCCCCGGGGTCGGGTGTCTGAGCCAGAGCACCATCTGCAGGTTCGAGTCCCTGACGCTGTCGCACAACAACATGGTGGCCCTTAAGCCGATCCTGGAGGCCTGGTTGGAGGAGGCGGAGAGGGCGCAGAGGGAGAAGATGTCCAAGCCGGAGATCTTCAACGGGGGCGACAAAAAGAGGAAACGAACGTCAATCGCGGCCCCGGAGAAGCGCTCCCTGGAGGCTTATTTCGCCGTGCAGCCGAGGCCCTCGTCGGAGAAGATCGCCGCAATCGCCGAGAAACTTGACCTGAAAAAGAACGTGGTCCGGGTTTGGTTTTGCAATCAGAGGCAAAAGCAGAAACGAATGAAGTTTTCTGCGACGCACTAAGACCATGCTGGGGCAACCTGCGGGACTCTTCCCTGTTTACACAAAAGACAAATCAGAGACAAGCTGCTGCACACTGTCAGAAAAACAAGGTACACCGTTGTGCCTGTTGTTACTGGGGCTGGACCTGTTCGACATACAGCCAGGGCTTAAAAGAAATGATATCCATTTTAACAAGTCATTTAATCTCTtatcaagtcttttttttttttcttaaaagggTTTTTGCTTTCAGGAATCCCTGAAATGCACCTGCAACACCTGAAAAAAAACGTAAGATGCTGTTTTACCTCATTGGCTGAATTCGTTACTTACTGAAGaagaaaatcacattttctGACTAAGTAATGGACTAAATGTCTCGTTAAGTTTCACTACAGTGTTGTCCACCTTGCAAAGGAGCAGCATCCACAgccctgtattttttttttttttttgcaccagTGCCTGAATCCCAGTTGTGGAAACAATTTCACAGAAAGTATTCAGTAGGAGCGTGTGCAAAGAAACACCTGCACGTCTCTGGAGTGTTAGCTGTATTTTAGAGGCGCTGAGAGGTTTCCATGTGTGGACACCTGCCGATTAATCACCACTCAGTATAACCagggactgtttttttttaattttttttaattttttttggaaGGTTCAGCCTCACGCAGTTACAAAAAACGACTGGATTCAACGGTgtaccttttttattattattctgacAGTGGAGACGGAGCACTGGGACTGGGAGAAAGACTGAGTTCCTGTCCAAAAACTTGAGACTCTTAAATCTTTACGCTTCTCCACAGAATAGGCCGATGCTCtctgacagacaggagagagagatcgCCATTGTGTCAGAAAAAGAGGGGGAACGATGCTCCGTCCAATTCATTCATATGGCAATTATTGTACAAAACAAATAAGCATAATAATGACGGGAATCGAGGAATAACCGATATTATCTTCCTTAGTCGGAAtagcttttttatatttatcatTGTACATATCTGTGAATAATTATGTTGCACCTCCGTGTGTGGAAAAGCTCATTGAAATGTATTGGATTTTCGCTGTCTTTTCTCCCAGGTGTTTGTTTCTGTAGGGAATTCAATAGTTTTTGGGGACAGATCGgacaaaatgactacaaatgTCGGTCTGTGGCTTATTTATGAGGCACAATAACTGTAATCCATTGCATGGTTTACTCGTAAGGGGGAGATGGTTGTTTTCTGTGCGTAATGGctccaaaaatatgaaaataaccCCCCAAGTGAATGCATTGCAAtaagaagagacacacacacacacacacacacacacacacacaaacacacgcacggatacacacattcacacggtATAGCTGTGTGGCTACCTCATTACGCAAGTGTTGGCACGTTCATGgtgattttaaaaacacaaaaaaagacgaGTAGGAtcattttatgtttgttttttaatgtgtatttttttcttcttttttgtttctcttccaCCGGTTTAATGGTGAATTAGGCCTAGAAGACTCACTGATGTGTAAACCTGTTGTATGTTCAAGTTCACTGCAAGGATGCTTTGAcaatcaaattattattattattattattattattattattattaggttgTTTATCTCCCCTCTTCGTGTCCTCATGAAACTGAATCATTttgcatattattattattattattattattattattattattattattattattattatcactgaCACCTTAATGGAGCGCACTTTGTAGATATTCCGATGAAGGGAAATAGTCGGCcttatttatacatattttttcaACACTTCTGAGAAAACGCtatgctttgttttgttttccttatCATGCCCTTATTTATTTGAACTTAATTTATTTTggagaagaaaaacaacatatttcatTTGTGAAAGTGTGctttaaatgtgtctgtgtaagCGACAGAAGCTGAAATAAACCGTGCACGTTTTACTTCA

Function

NR:

description
PREDICTED: brain-specific homeobox/POU domain protein 3-like

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09366 POU4F, BRN3; POU domain transcription factor, class 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826433.1 True 3254 mRNA 0.46 2 12103785 12108468

Neighbor

gene id symbol gene type direction distance location
cldn2 cldn2,LOC102201381,LOC101477941,LOC103375965 coding upstream 262068 11836615 ~ 11841717 (+)
dtx2 dtx2,LOC101480294,LOC102304721,LOC103146114,LOC106924423,LOC103476279,LOC106954657 coding upstream 365389 11716728 ~ 11738396 (+)
arhgef12b LOC103374540 coding upstream 1100226 10963159 ~ 11003559 (+)
lrrc32 lrrc32,LOC104944766 coding upstream 1175143 10920209 ~ 10928642 (+)
kcnj1b LOC103357767,LOC108243594,LOC102313312,LOC100709539 coding upstream 1301697 10798318 ~ 10802088 (+)
btg4 LOC104941696 coding downstream 267432 12375900 ~ 12378914 (+)
LOC120575699 LOC103363899,LOC104924193,LOC102296018,LOC102776456,LOC104941697,LOC108250331 coding downstream 274349 12382817 ~ 12391830 (+)
LOC120575701 LOC103354648,LOC100698795 coding downstream 309043 12417511 ~ 12418379 (+)
zmat2 zmat2 coding downstream 335682 12444150 ~ 12447615 (+)
foxi3a LOC105026277,LOC108269392,LOC103035522 coding downstream 363316 12471784 ~ 12473935 (+)
G164844 NA non-coding upstream 7961 12095579 ~ 12095824 (+)
G164759 NA non-coding upstream 359823 11743690 ~ 11743962 (+)
G164750 NA non-coding upstream 387246 11716325 ~ 11716539 (+)
G164749 NA non-coding upstream 399640 11702480 ~ 11704145 (+)
G164699 NA non-coding upstream 410061 11645027 ~ 11693724 (+)
LOC120544195 NA non-coding downstream 240469 12348937 ~ 12352185 (+)
G164894 NA non-coding downstream 381206 12489674 ~ 12541314 (+)
G165000 LOC103376870 non-coding downstream 486053 12594521 ~ 12594746 (+)
G165037 NA non-coding downstream 699316 12807784 ~ 12808093 (+)
G165026 NA non-coding downstream 722293 12830761 ~ 12887695 (+)
klf8 LOC101477270,LOC100704719 other upstream 141896 11865601 ~ 11961889 (+)
lig3 tmem248,lig3,LOC102796031,LOC102796838 other upstream 854466 11216561 ~ 11249319 (+)
rcc1l rcc1l other upstream 1079586 11013623 ~ 11024199 (+)
mpzl1l LOC104919192,LOC102794867,LOC102196015,LOC103357763 other upstream 1194032 10889807 ~ 10909753 (+)
rabep1 rabep1 other upstream 1217458 10852285 ~ 10886327 (+)
slc25a14 slc25a14,LOC103146102,LOC106926506 other downstream 185982 12294450 ~ 12370867 (+)
LOC120544113 LOC104924140 other downstream 186125 12294593 ~ 12311869 (+)
LOC120575591 LOC104924162 other downstream 221489 12329957 ~ 12347052 (+)
lcp2a lcp2 other downstream 342294 12450762 ~ 12468314 (+)
G165033 NA other downstream 686092 12794560 ~ 12797300 (+)

Expression


Co-expression Network