LOC120575626


Basic Information

Item Value
gene id LOC120575626
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 12797997 ~ 12800012 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826444.1
TGAATTCTACAAAACAACTAATTTGATTTAGTAATGAGAACGTTTTATTACAAAACTGTAAAGAATAAGTAATGACCACCCAAAAGTTTTCATTATTATTCCATTAGGAACACTGATTCCCAGAACAACTTTTTAATTTCAGGTCTGACCTTAAAGGCAGACTTTGAGGACTAAAGACACACTGCAACTCTTAAACTCCTGTAGCTCCTCTTCCTGAAAGAAGCACAGCTTCATATCCTCCACCCAGACTTTATTTACTGGTTAAGTGAGGCTCCTCCTGCTCAAAGACTATTCAGCTCAGACATTTGTCATTCCCTCCCCTTTCACAGATCAGCACCATGTGATTTATCGGAAGCAGAGAGTGAAACTTACTGACATTCTGTCGTCGAGAGGAGAAATGGCGCAGCAACTGATTCAGCTGGATCGAGAAAAACTATGCTGTTCAATCTGTCTGGATCTTCTAAAGGATCCGGTGACTATTCCCTGTGGGCACAGCTACTGCATGGGCTGTATTAAAGACTGCTGGGGTGAGGAGCATGAGgagaaaacacacagctgtCCTCAGTGCAGGCAGAACTTCACAACAAGGCCTGTCCTGGTGAAAAATACCATGTTGGCAGAGTTGGTGGAGGAACTGAAGAAAGTAGGACCTCAAGCTGCTTCACCTGATCATTCCTATGTGGGACCTGGAGACGTGGCCTGTGATTTCTGCTCTGGGATGAAAGTGAAAGCCTTCAAGTCCTGTCTGGTGTGTATGGCCTCTTACTGCGAGCAGCACCTCCAGCCTCACTACAGCGTAGCTCCtttaaagaaacacaagctggttGAAGCCACGTTGAAGCTTCAGGAGAACATCTGCTCTCACCACGACGAGGTGATGAAGATTTTCTGCCGCACTGATCAGAAGTGcatctgttatctctgctccATGGATGATCATAAAGGCCACGATACAGTCTCCGCTGCAGCAGAGAGGGCTGAGAGGCAGAAGGAGCTTGGGGTGAGTCGGCAAAAAGTCCAACAGAGagtccaggacagagagaaagatgtcaAGGTGCTTCAGCAGAGGGTGGAGGTTATCAATCATTCtgctgatgaagctgtgagggaCAGTGAGAAGATCTTCACCGATTTGATAAGTCTCATTAATAAAAGAAGCTCTGAAGTGAAGCAGCACATCAGATCCCAGCAGACAACTGAGGTGAGTCGAGCTAAAGAGCTTgaggagaagctgcagcaggagatcactgagctgcGGAGGAAAGACACTGAGCTGGAGAAGCTCTCGCACACAGAGGATCACCTCTATTTCCTGAACAGCTACCCCTCACTGTCCCGTCTGAGTGAGTCTGAGGACTTACCCAGCATTGATGTCTGTCCTCTGAGCTCTTTTGAGGATGTGACAGCGGCAGTGTCAGAGGCCAGAGATAAACTGCAGTCTGTTCTGAGTGACGAGTGGGCAAAGATCTCACTGGCAGTGACTGTGGTGGATGTTTTACTCTCTCAAAAAGAGCCCGGGACCAGAGCTGAATTTATGAAATATGCTTGTCATCTCACACTGGATCCAAATacagcacacaaacatttgTCATTGAGTGACAGGAACAGAAAAGCAAAATTAATGGCAGCAGACCAGTCATATTTGGATCACCCAGACAGATTTATTGAATGGTGGCAGGTCATGAGTAGAGAGggtctgactggacgttgttactgggaggtgaaGCAGAGTGGAAAAGTTTTAATAGGAGTTGCATACAAGGATATTAGCAGAACAGGGACCAAAGACAAATGTGGATTTGGAAATAATGACAAATCTTGGGTATTAGACTGTGACGGTGTTAGTTATAAATTCAGACATAAGAATATTTCTCTTCCCATCTCAGGCCCTCAGTCCTCCAGAATAGGAGTTTACCTGGATCACTCTGCAGGTACTCTGTCTTAGGCTGTGATGTGTTTTCTTggattttggttgttttgtcaTATCAATCTAATAAAAAtcgtgaaataaaaaaa

Function

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826444.1 True 2016 mRNA 0.45 1 12797997 12800012

Neighbor

gene id symbol gene type direction distance location
pitx1 pitx1,LOC100690583 coding upstream 37721 12747967 ~ 12760276 (+)
LOC120544088 LOC102798793,LOC104924243,LOC101475378,LOC100699679,LOC101078553,LOC103363335,LOC108238083,LOC107386699 coding upstream 165110 12611856 ~ 12632887 (+)
larp1 larp1 coding upstream 209411 12529315 ~ 12588586 (+)
foxi3a LOC105026277,LOC108269392,LOC103035522 coding upstream 324062 12471784 ~ 12473935 (+)
zmat2 zmat2 coding upstream 350382 12444150 ~ 12447615 (+)
sar1b sar1b,LOC107713617,LOC107603246,LOC102795722 coding downstream 65235 12865247 ~ 12874039 (+)
cdkn2aipnl cdkn2aipnl,LOC102794961 coding downstream 314871 13114883 ~ 13116904 (+)
ppp2cab ppp2ca,LOC107085894 coding downstream 344921 13144933 ~ 13155644 (+)
skp1 skp1,Skp1,SKP1 coding downstream 357070 13157082 ~ 13162735 (+)
vdac1 vdac1 coding downstream 481883 13281895 ~ 13293010 (+)
G165000 LOC103376870 non-coding upstream 203251 12594521 ~ 12594746 (+)
G164894 NA non-coding upstream 256683 12489674 ~ 12541314 (+)
LOC120544195 NA non-coding upstream 445812 12348937 ~ 12352185 (+)
G164844 NA non-coding upstream 702173 12095579 ~ 12095824 (+)
G164759 NA non-coding upstream 1054035 11743690 ~ 11743962 (+)
G165037 NA non-coding downstream 7772 12807784 ~ 12808093 (+)
G165026 NA non-coding downstream 30749 12830761 ~ 12887695 (+)
G165062 NA non-coding downstream 118421 12918433 ~ 12930274 (+)
G165076 NA non-coding downstream 279767 13079779 ~ 13124053 (+)
G165078 NA non-coding downstream 320797 13120809 ~ 13121842 (+)
G165033 NA other upstream 697 12794560 ~ 12797300 (+)
lcp2a lcp2 other upstream 329683 12450762 ~ 12468314 (+)
slc25a14 slc25a14,LOC103146102,LOC106926506 other upstream 427130 12294450 ~ 12370867 (+)
LOC120575591 LOC104924162 other upstream 450945 12329957 ~ 12347052 (+)
LOC120544113 LOC104924140 other upstream 486128 12294593 ~ 12311869 (+)
G165043 ddx46,LOC102797024 other downstream 17219 12817231 ~ 12820709 (+)
gabra6b NA other downstream 2062649 14862661 ~ 14901003 (+)
G165556 yipf5,LOC102777143 other downstream 3156468 15956480 ~ 15958135 (+)
G165702 NA other downstream 3785130 16585142 ~ 16626346 (+)
LOC120544324 NA other downstream 3936652 16736664 ~ 16754289 (+)

Expression


Co-expression Network