LOC120575637


Basic Information

Item Value
gene id LOC120575637
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 5799038 ~ 5803339 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826455.1
GTTGGTTTCTGAGCGAGACATGGAGAGATGGAAGAAAAGGGAGATCGAACTAGcccaacagaaacagaaaccaaTACATCTGGAACTCGTGAGTTGTACATGGAGGATGGAACAGAAATTGAGAACTCTCTGCTGAACATTGAAACAAAACACCGCATTGGGAGAAGATGGAAAGAATCTGATTTAGACTTCCAGTCTACCCTTAAAGATGTTGACAGTGACCTCAGAGGCCAACTTATATGCAAGGCAAGAACTGAATCAAGGGAGAGAGCAGTCCTCCTCCatctgaaaagaaaatatccAGATGGGCAGGGCATTGCCATTAGACTGTCCAAGCAGGTAGCCAACTCCAACAAGAGACTGAGACAAGCAATCAAGGAATACAACAGTATTCAGTGGCCACCGCAGATGAGCATCTTCCCTGCAACAATTGATTTTCAGGAAGCATGCGATCCCTCTTGGCCTGTCTACTTCTGCTCTGATGAAACTATTGAAGAAGATGATGTTTCAAGGAGTCTGAAAAGGCGTGGAATTGATGCCTTACATATGAGGACACGGGCAGCTGAGGAAAAGCACATGCTTTACAAGGAAATGAGAACTGTAACTGAACACCTCAATCAGCAGCATGCCTTTCTGTGCTCTGCCATCAATGACACAGAGCAGCCTGGTGCAAAAGCTGCTCTAATCCAACGTCTCAAACAGCTGGAAAGAAAGCTACATCATGCCACTGTGATGTTTCACCAACATGTACCAGACATTGTTCCTGCAACATGTAGTTATGTCGTCCCAGAAACCCCCTACCTGTCTCAGGACCTCCCCATGTCAAGCATACAGACACTggtatatgatgatgatgatgatgatgatgatgatgatgatgataatgacagCAACTAGCACTGTAAGCACTCATGACTAGGGCTGGTTTGCTGCTTCCTGGTTTTTAATGAATAGTTTGAGCAAGCTTGTATGCTTTGCTATTTATCATTCAAAATGTCTCCTTAATTCAGCGCTAACCAAAATTCAACAAACTGACAGTTTAGgttctgtgtgttttcattgtaaCTGATCTGGATCTAATTGATGCTGTGTTGCTGATTAGTTGATTAGTCTAACTGCAAAAAgtccatgtttgtttttcttgagCTCTGAACTGTCCTGCCAAtgtgaaccaaaaaaaaaaatttaaacaagcTGTTTTTTggacaataaataaacactttTTTGTAGAAGCTGCTGTCTAAGTAACTTTTTAAAGCGTTGTTGTACTCAATGTA
>XM_039826456.1
GTACCTTTCCATGTACAGTAATGAAATACAATCCTGTAAACTGTGAGGGTAAAGAAGTAACAGTAGCAGTAGTAATGTCTTTATCTGTTCTCCAGACACTGTCTGTAGATGGAAAAGGGACTACATCACCAATCTGATTCAGTTTTACAAGTTCAAGTAAGACTTCAATGTGTTGATATCTGGAACTCGTGAGTTGTACATGGAGGATGGAACAGAAATTGAGAACTCTCTGCTGAACATTGAAACAAAACACCGCATTGGGAGAAGATGGAAAGAATCTGATTTAGACTTCCAGTCTACCCTTAAAGATGTTGACAGTGACCTCAGAGGCCAACTTATATGCAAGGCAAGAACTGAATCAAGGGAGAGAGCAGTCCTCCTCCatctgaaaagaaaatatccAGATGGGCAGGGCATTGCCATTAGACTGTCCAAGCAGGTAGCCAACTCCAACAAGAGACTGAGACAAGCAATCAAGGAATACAACAGTATTCAGTGGCCACCGCAGATGAGCATCTTCCCTGCAACAATTGATTTTCAGGAAGCATGCGATCCCTCTTGGCCTGTCTACTTCTGCTCTGATGAAACTATTGAAGAAGATGATGTTTCAAGGAGTCTGAAAAGGCGTGGAATTGATGCCTTACATATGAGGACACGGGCAGCTGAGGAAAAGCACATGCTTTACAAGGAAATGAGAACTGTAACTGAACACCTCAATCAGCAGCATGCCTTTCTGTGCTCTGCCATCAATGACACAGAGCAGCCTGGTGCAAAAGCTGCTCTAATCCAACGTCTCAAACAGCTGGAAAGAAAGCTACATCATGCCACTGTGATGTTTCACCAACATGTACCAGACATTGTTCCTGCAACATGTAGTTATGTCGTCCCAGAAACCCCCTACCTGTCTCAGGACCTCCCCATGTCAAGCATACAGACACTggtatatgatgatgatgatgatgatgatgatgatgatgatgataatgacagCAACTAGCACTGTAAGCACTCATGACTAGGGCTGGTTTGCTGCTTCCTGGTTTTTAATGAATAGTTTGAGCAAGCTTGTATGCTTTGCTATTTATCATTCAAAATGTCTCCTTAATTCAGCGCTAACCAAAATTCAACAAACTGACAGTTTAGgttctgtgtgttttcattgtaaCTGATCTGGATCTAATTGATGCTGTGTTGCTGATTAGTTGATTAGTCTAACTGCAAAAAgtccatgtttgtttttcttgagCTCTGAACTGTCCTGCCAAtgtgaaccaaaaaaaaaaatttaaacaagcTGTTTTTTggacaataaataaacactttTTTGTAGAAGCTGCTGTCTAAGTAACTTTTTAAAGCGTTGTTGTACTCAATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826455.1 False 1277 mRNA 0.42 5 5799038 5803339
XM_039826456.1 True 1376 mRNA 0.41 5 5799039 5801542

Neighbor

gene id symbol gene type direction distance location
LOC120575590 sap30l,sp30l,LOC105890504 coding downstream 290750 5490062 ~ 5508288 (-)
serpinf1 serpinf1 coding downstream 483480 5295961 ~ 5315558 (-)
LOC120544303 NA coding downstream 610011 5186003 ~ 5189027 (-)
LOC120544302 LOC104931089,LOC104947899 coding downstream 624771 5173314 ~ 5174267 (-)
LOC120544301 LOC104947899,LOC104931089 coding downstream 629014 5169071 ~ 5170024 (-)
LOC120575643 LOC103353475 coding upstream 268879 6072218 ~ 6181961 (-)
LOC120544211 NA coding upstream 483567 6286906 ~ 6290324 (-)
gemin5 LOC102786240 coding upstream 525508 6328847 ~ 6363792 (-)
LOC120575570 ddc,LOC102780833 coding upstream 577720 6381059 ~ 6396327 (-)
rars1 rars coding upstream 1487257 7290596 ~ 7321787 (-)
G163625 NA non-coding downstream 115625 5683153 ~ 5683413 (-)
G163624 NA non-coding downstream 145380 5650699 ~ 5653658 (-)
G163585 NA non-coding downstream 164975 5633351 ~ 5634063 (-)
G163561 NA non-coding downstream 361225 5434433 ~ 5437813 (-)
G163554 NA non-coding downstream 399014 5399545 ~ 5400024 (-)
G163643 NA non-coding upstream 359245 6162584 ~ 6163275 (-)
G163689 NA non-coding upstream 452045 6255384 ~ 6255652 (-)
G163688 NA non-coding upstream 480030 6283369 ~ 6290858 (-)
G163694 NA non-coding upstream 498345 6301684 ~ 6301977 (-)
G163707 mrpl22,LOC102778570 non-coding upstream 565825 6369164 ~ 6370226 (-)
LOC120544555 siah2,LOC101471392,LOC102786130 other downstream 977166 4281773 ~ 4821872 (-)
G163315 NA other downstream 978539 4334843 ~ 4820499 (-)
LOC120544563 NA other downstream 1048608 4735214 ~ 4750430 (-)
LOC120544552 LOC104935312,LOC100692486,LOC101485649,LOC106922321,LOC102232317,LOC102292363 other downstream 1104422 4606736 ~ 4694616 (-)
LOC120544568 LOC104932967,LOC104935308 other downstream 1305687 4491005 ~ 4493351 (-)
G163767 NA other upstream 1453799 7257138 ~ 7286265 (-)
wwc1 wwc1 other upstream 1527575 7330914 ~ 7398125 (-)
LOC120543652 LOC101463747,LOC100690676,LOC102213522,LOC102314573,LOC102780849 other upstream 2058114 7861453 ~ 7887088 (-)
G164022 kctd7,LOC102776841 other upstream 2543489 8346828 ~ 8352505 (-)
rabgef1 rabgef1,LOC102778478 other upstream 2565156 8368495 ~ 8380575 (-)

Expression


Co-expression Network