LOC120575699 (LOC103363899,LOC104924193,LOC102296018,LOC102776456,LOC104941697,LOC108250331)


Basic Information

Item Value
gene id LOC120575699
gene name LOC103363899,LOC104924193,LOC102296018,LOC102776456,LOC104941697,LOC108250331
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 12382817 ~ 12391830 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826526.1
CTTTGTCATTGCGACGtcctctcagctcctcctcACATCCGGTCGTATATATGTTGCCACGAGTTAGCGGCGAATTTGGAGTGTCCATTTTGAGCAGCGAGTCGGCGTCTCCGGTATTTTCCTCTTAAATCTCTTGAAGAGCCCACCGTCAGAATGGCAGACGCTGATAATCTCCTCATGGAGACATCGGACCAGAACGGCAACGAGGGAGAGGACGACCAGAACGGAGCCGAGCAGGAGCTGATGGGTGGAGAGGAGGATTGTCTGGAGAGCCAGGAAGGTCTGGAGAGCCAGGAAGGTCTGGAGGGCCAGGAAGGTCTGGAGGGCCAGGAAGGTCTGGAAGGCCTGGAAGGTGGCGCAGATGGAGGCAAGATTGACGCCAGCAAAGGAGAGGAGGATGCTGGTAAAATGTTCGTGGGCGGCCTCAGCTGGGACACGAGTAAAAAGGACCTAAAGGATTACTTCAGTAAGTTCGGCGAGGTTTCAGACTGCACCATCAAGATGGATTCAAACACTGGCCGATCCAGAGGCTTTGGCTTCGTTCTCTTCAAAGACTCCTCCAGCGTGGAAAAGGTGCTCGAGCAAAAGGAACACAGACTGGACGGACGTCCAATCGACCCCAAGAAGGCAATGGCCATGAAGAAGGAGCCCGTAAAAAAGATCTTTGTCGGGGGTTTGAACCCTGAGGCCACGGAGGACACCATCAGGGAATATTTTGGAGCCTTCGGAGAGATCGAAACCATTGAGCTTCCCATCGACCCCAAATCAAAGAAAAGGAGGGGTTTCATCTTCATCACATACAAAGAAGAAGCCAGTGTCAAGAAGTGTCTGGAGAAGAAATACCACAACATCCAGGGCGGCAGGTGTGAGCTGAAGATCGCCCAGCCAAAGGAGGtgtaccagcagcagcagtatggAGCGGGAcgtggtggtggtggcggcgGCGGTGGTTATGGAGGCCGGGGCGGCAGGGGCCGTGGAGGTCAGGGCCAGGGCTGGAACCAAGGCTATGGAAACTACTACCAGGGATACGGTAACCAAGGCTATGGTGGATACGGCGGATATGGCAACTATGACTACACTTCCGGTTACTATGGATATGGTCCCGGATATGATTACAACCAGGGCAATGGCAGCTACGGAAAAACACCAAGACGGGGGGCACACCAGACCAGCTACAAGCCATACTGATGATCAAGTGGTAGCGCAAGGACTCCAGTGATCCAGTGAGACCGACGGCTGGATGGACACACTGGGCATGACACGACCTCTTTTATGACAGACGACCATTTGTACAGAAAACATCTGAAAtgtaactttttcttttttttttttctttttttttaatcctatcATTTTTAGGTTTTACTTTACCCTTtggtggtttttgttttttttctcttcccctTCCACATTTCCATCAATGGAAGTGTAATTTTTACTGTACTTTTTGGTACCTGTTTTGATTCTAATGTATTGTAAGGCTTGTATTTTACATGTTTGCTGGCTTTACAGGTTGAAAATCTTGGCGCTGTAAAGGAGCTTTTTTGACAAATAAACAGTTTtcagtaatttttttattttttttgggttCTGGTGCTTCCAGGTTTTGGGGTGGAAGATTATGAAGTTCAATGAGTTTAGGATTCAAATTCAGTTGTCAACATTGATTTCTCGGTCTTTTGTAGCCACACAATTCAATAATCTGTATTGAAGCAATGTTGAGTATAACTCAAGAATTATGTTTCACATTCCCTCAGATCACACTTTGGTGTATTTTTTTTGCCCTTGGCAGTGTATCAAGATTATTTTTAACCTTAGCTACAATTACTTAAAACTGAAACGACTGGCTGCAAGCTTCATCCTTCCAGGACGTTCTGAATTCACCAAGAATCAACATCTGAAAGCCTAGATGTGTGGGATGTAAAAGGTGGGGGCGGGGGGGATGAATTGACACACATTTTACATAAGCAACATGTTTAAGTTTCTATGCTGGTTTAGTTTGCGTTTgtcaagtgttattttttttttttttttttttttttttttttt
>XM_039826527.1
CTTTGTCATTGCGACGtcctctcagctcctcctcACATCCGGTCGTATATATGTTGCCACGAGTTAGCGGCGAATTTGGAGTGTCCATTTTGAGCAGCGAGTCGGCGTCTCCGGTATTTTCCTCTTAAATCTCTTGAAGAGCCCACCGTCAGAATGGCAGACGCTGATAATCTCCTCATGGAGACATCGGACCAGAACGGCAACGAGGGAGAGGACGACCAGAACGGAGCCGAGCAGGAGCTGATGGGTGGAGAGGAGGATTGTCTGGAGAGCCAGGAAGGTCTGGAGAGCCAGGAAGGTCTGGAGGGCCAGGAAGGTCTGGAGGGCCAGGAAGGTCTGGAAGGCCTGGAAGGTGGCGCAGATGGAGGCAAGATTGACGCCAGCAAAGGAGAGGAGGATGCTGGTAAAATGTTCGTGGGCGGCCTCAGCTGGGACACGAGTAAAAAGGACCTAAAGGATTACTTCAGTAAGTTCGGCGAGGTTTCAGACTGCACCATCAAGATGGATTCAAACACTGGCCGATCCAGAGGCTTTGGCTTCGTTCTCTTCAAAGACTCCTCCAGCGTGGAAAAGGTGCTCGAGCAAAAGGAACACAGACTGGACGGACGTCCAATCGACCCCAAGAAGGCAATGGCCATGAAGAAGGAGCCCGTAAAAAAGATCTTTGTCGGGGGTTTGAACCCTGAGGCCACGGAGGACACCATCAGGGAATATTTTGGAGCCTTCGGAGAGATCGAAACCATTGAGCTTCCCATCGACCCCAAATCAAAGAAAAGGAGGGGTTTCATCTTCATCACATACAAAGAAGAAGCCAGTGTCAAGAAGTGTCTGGAGAAGAAATACCACAACATCCAGGGCGGCAGGTGTGAGCTGAAGATCGCCCAGCCAAAGGAGGtgtaccagcagcagcagtatggAGCGGGAcgtggtggtggtggcggcgGCGGTGGTTATGGAGGCCGGGGCGGCAGGGGCCGTGGAGGTCAGGGCCAGGGCTGGAACCAAGGCTATGGAAACTACTACCAGGGATACGGTAACCAAGGCTATGGTGGATACGGCGGATATGGCAACTATGACTACACTTCCGGTTACTATGGATATGGTCCCGGATATGATTACAGACTCCAGTGATCCAGTGAGACCGACGGCTGGATGGACACACTGGGCATGACACGACCTCTTTTATGACAGACGACCATTTGTACAGAAAACATCTGAAAtgtaactttttcttttttttttttctttttttttaatcctatcATTTTTAGGTTTTACTTTACCCTTtggtggtttttgttttttttctcttcccctTCCACATTTCCATCAATGGAAGTGTAATTTTTACTGTACTTTTTGGTACCTGTTTTGATTCTAATGTATTGTAAGGCTTGTATTTTACATGTTTGCTGGCTTTACAGGTTGAAAATCTTGGCGCTGTAAAGGAGCTTTTTTGACAAATAAACAGTTTtcagtaatttttttattttttttgggttCTGGTGCTTCCAGGTTTTGGGGTGGAAGATTATGAAGTTCAATGAGTTTAGGATTCAAATTCAGTTGTCAACATTGATTTCTCGGTCTTTTGTAGCCACACAATTCAATAATCTGTATTGAAGCAATGTTGAGTATAACTCAAGAATTATGTTTCACATTCCCTCAGATCACACTTTGGTGTATTTTTTTTGCCCTTGGCAGTGTATCAAGATTATTTTTAACCTTAGCTACAATTACTTAAAACTGAAACGACTGGCTGCAAGCTTCATCCTTCCAGGACGTTCTGAATTCACCAAGAATCAACATCTGAAAGCCTAGATGTGTGGGATGTAAAAGGTGGGGGCGGGGGGGATGAATTGACACACATTTTACATAAGCAACATGTTTAAGTTTCTATGCTGGTTTAGTTTGCGTTTgtcaagtgttattttttttttttttttttttttttttttttt

Function

NR:

description
PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like

GO: NA

KEGG:

id description
K13044 HNRNPABD; heterogeneous nuclear ribonucleoprotein A/B/D

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826526.1 True 2052 mRNA 0.46 9 12382817 12391830
XM_039826527.1 False 1961 mRNA 0.46 8 12382817 12391830

Neighbor

gene id symbol gene type direction distance location
btg4 LOC104941696 coding upstream 3903 12375900 ~ 12378914 (+)
zgc:158291 zgc:158291,LOC107387148,LOC104965395,LOC101076515,LOC103395138,LOC107697335,LOC107675183,LOC107587290,LOC105901510 coding upstream 274349 12103785 ~ 12108468 (+)
cldn2 cldn2,LOC102201381,LOC101477941,LOC103375965 coding upstream 541100 11836615 ~ 11841717 (+)
dtx2 dtx2,LOC101480294,LOC102304721,LOC103146114,LOC106924423,LOC103476279,LOC106954657 coding upstream 644421 11716728 ~ 11738396 (+)
arhgef12b LOC103374540 coding upstream 1379258 10963159 ~ 11003559 (+)
LOC120575701 LOC103354648,LOC100698795 coding downstream 25681 12417511 ~ 12418379 (+)
zmat2 zmat2 coding downstream 52320 12444150 ~ 12447615 (+)
foxi3a LOC105026277,LOC108269392,LOC103035522 coding downstream 79954 12471784 ~ 12473935 (+)
larp1 larp1 coding downstream 137485 12529315 ~ 12588586 (+)
LOC120544088 LOC102798793,LOC104924243,LOC101475378,LOC100699679,LOC101078553,LOC103363335,LOC108238083,LOC107386699 coding downstream 220026 12611856 ~ 12632887 (+)
LOC120544195 NA non-coding upstream 30632 12348937 ~ 12352185 (+)
G164844 NA non-coding upstream 286993 12095579 ~ 12095824 (+)
G164759 NA non-coding upstream 638855 11743690 ~ 11743962 (+)
G164750 NA non-coding upstream 666278 11716325 ~ 11716539 (+)
G164749 NA non-coding upstream 678672 11702480 ~ 11704145 (+)
G164894 NA non-coding downstream 97844 12489674 ~ 12541314 (+)
G165000 LOC103376870 non-coding downstream 202691 12594521 ~ 12594746 (+)
G165037 NA non-coding downstream 415954 12807784 ~ 12808093 (+)
G165026 NA non-coding downstream 438931 12830761 ~ 12887695 (+)
G165062 NA non-coding downstream 526603 12918433 ~ 12930274 (+)
slc25a14 slc25a14,LOC103146102,LOC106926506 other upstream 11950 12294450 ~ 12370867 (+)
LOC120575591 LOC104924162 other upstream 35765 12329957 ~ 12347052 (+)
LOC120544113 LOC104924140 other upstream 70948 12294593 ~ 12311869 (+)
klf8 LOC101477270,LOC100704719 other upstream 420928 11865601 ~ 11961889 (+)
lig3 tmem248,lig3,LOC102796031,LOC102796838 other upstream 1133498 11216561 ~ 11249319 (+)
lcp2a lcp2 other downstream 58932 12450762 ~ 12468314 (+)
G165033 NA other downstream 402730 12794560 ~ 12797300 (+)
G165043 ddx46,LOC102797024 other downstream 425401 12817231 ~ 12820709 (+)
gabra6b NA other downstream 2470831 14862661 ~ 14901003 (+)
G165556 yipf5,LOC102777143 other downstream 3564650 15956480 ~ 15958135 (+)

Expression


Co-expression Network